 Software
"Software" is a descriptor in the National Library of Medicine's controlled vocabulary thesaurus,
MeSH (Medical Subject Headings). Descriptors are arranged in a hierarchical structure,
which enables searching at various levels of specificity.
Sequential operating programs and data which instruct the functioning of a digital computer.
| Descriptor ID |
D012984
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| MeSH Number(s) |
L01.224.900
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| Concept/Terms |
Software- Software
- Computer Software
- Software, Computer
- Computer Programs
- Computer Program
- Program, Computer
- Programs, Computer
Software Tools- Software Tools
- Software Tool
- Tool, Software
- Tools, Software
Computer Applications Software- Computer Applications Software
- Applications Software, Computer
- Applications Softwares, Computer
- Computer Applications Softwares
- Software, Computer Applications
- Softwares, Computer Applications
- Computer Software Applications
- Application, Computer Software
- Applications, Computer Software
- Computer Software Application
- Software Application, Computer
- Software Applications, Computer
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Below are MeSH descriptors whose meaning is more general than "Software".
Below are MeSH descriptors whose meaning is more specific than "Software".
This graph shows the total number of publications written about "Software" by people in this website by year, and whether "Software" was a major or minor topic of these publications.
To see the data from this visualization as text, click here.
| Year | Major Topic | Minor Topic | Total |
|---|
| 1995 | 0 | 2 | 2 | | 1996 | 1 | 0 | 1 | | 1997 | 0 | 2 | 2 | | 1998 | 1 | 2 | 3 | | 1999 | 1 | 3 | 4 | | 2000 | 0 | 2 | 2 | | 2002 | 1 | 1 | 2 | | 2003 | 0 | 3 | 3 | | 2004 | 1 | 7 | 8 | | 2005 | 3 | 9 | 12 | | 2006 | 4 | 8 | 12 | | 2007 | 6 | 12 | 18 | | 2008 | 9 | 9 | 18 | | 2009 | 11 | 6 | 17 | | 2010 | 10 | 9 | 19 | | 2011 | 12 | 21 | 33 | | 2012 | 15 | 10 | 25 | | 2013 | 12 | 11 | 23 | | 2014 | 16 | 8 | 24 | | 2015 | 15 | 6 | 21 | | 2016 | 8 | 12 | 20 | | 2017 | 9 | 14 | 23 | | 2018 | 11 | 12 | 23 | | 2019 | 10 | 11 | 21 | | 2020 | 8 | 8 | 16 | | 2021 | 10 | 10 | 20 | | 2022 | 8 | 7 | 15 | | 2023 | 7 | 10 | 17 | | 2024 | 1 | 3 | 4 | | 2025 | 0 | 1 | 1 |
To return to the timeline, click here.
Below are the most recent publications written about "Software" by people in Profiles.
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Davidson NR, Zhang F, Greene CS. BuDDI: Bulk Deconvolution with Domain Invariance to predict cell-type-specific perturbations from bulk. PLoS Comput Biol. 2025 Jan; 21(1):e1012742.
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Karakus KE, Snell-Bergeon JK, Akturk HK. Comparison of Computational Statistical Packages for the Analysis of Continuous Glucose Monitoring Data with a Reference Software, "Ambulatory Glucose Profile," in Type 1 Diabetes. Diabetes Technol Ther. 2025 Mar; 27(3):202-208.
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Wade KJ, Suseno R, Kizer K, Williams J, Boquett J, Caillier S, Pollock NR, Renschen A, Santaniello A, Oksenberg JR, Norman PJ, Augusto DG, Hollenbach JA. MHConstructor: a high-throughput, haplotype-informed solution to the MHC assembly challenge. Genome Biol. 2024 Oct 17; 25(1):274.
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Putman TE, Schaper K, Matentzoglu N, Rubinetti VP, Alquaddoomi FS, Cox C, Caufield JH, Elsarboukh G, Gehrke S, Hegde H, Reese JT, Braun I, Bruskiewich RM, Cappelletti L, Carbon S, Caron AR, Chan LE, Chute CG, Cortes KG, De Souza V, Fontana T, Harris NL, Hartley EL, Hurwitz E, Jacobsen JOB, Krishnamurthy M, Laraway BJ, McLaughlin JA, McMurry JA, Moxon SAT, Mullen KR, O'Neil ST, Shefchek KA, Stefancsik R, Toro S, Vasilevsky NA, Walls RL, Whetzel PL, Osumi-Sutherland D, Smedley D, Robinson PN, Mungall CJ, Haendel MA, Munoz-Torres MC. The Monarch Initiative in 2024: an analytic platform integrating phenotypes, genes?and diseases across species. Nucleic Acids Res. 2024 Jan 05; 52(D1):D938-D949.
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Mastronarde DN. Accurate, automatic determination of astigmatism and phase with Ctfplotter in IMOD. J Struct Biol. 2024 03; 216(1):108057.
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Harris NL, Fields CJ, Hokamp K, Just J, Khetani R, Maia J, M?nager H, Munoz-Torres MC, Unni D, Williams J. BOSC 2023, the 24th annual Bioinformatics Open Source Conference. F1000Res. 2023; 12:1568.
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Carmody LC, Gargano MA, Toro S, Vasilevsky NA, Adam MP, Blau H, Chan LE, Gomez-Andres D, Horvath R, Kraus ML, Ladewig MS, Lewis-Smith D, Lochm?ller H, Matentzoglu NA, Munoz-Torres MC, Schuetz C, Seitz B, Similuk MN, Sparks TN, Strauss T, Swietlik EM, Thompson R, Zhang XA, Mungall CJ, Haendel MA, Robinson PN. The Medical Action Ontology: A tool for annotating and analyzing treatments and clinical management of human disease. Med. 2023 Dec 08; 4(12):913-927.e3.
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Bortz DM, Messenger DA, Dukic V. Direct Estimation of Parameters in ODE Models Using WENDy: Weak-Form Estimation of Nonlinear Dynamics. Bull Math Biol. 2023 10 05; 85(11):110.
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Sreedasyam A, Plott C, Hossain MS, Lovell JT, Grimwood J, Jenkins JW, Daum C, Barry K, Carlson J, Shu S, Phillips J, Amirebrahimi M, Zane M, Wang M, Goodstein D, Haas FB, Hiss M, Perroud PF, Jawdy SS, Yang Y, Hu R, Johnson J, Kropat J, Gallaher SD, Lipzen A, Shakirov EV, Weng X, Torres-Jerez I, Weers B, Conde D, Pappas MR, Liu L, Muchlinski A, Jiang H, Shyu C, Huang P, Sebastian J, Laiben C, Medlin A, Carey S, Carrell AA, Chen JG, Perales M, Swaminathan K, Allona I, Grattapaglia D, Cooper EA, Tholl D, Vogel JP, Weston DJ, Yang X, Brutnell TP, Kellogg EA, Baxter I, Udvardi M, Tang Y, Mockler TC, Juenger TE, Mullet J, Rensing SA, Tuskan GA, Merchant SS, Stacey G, Schmutz J. JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom. Nucleic Acids Res. 2023 09 08; 51(16):8383-8401.
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Marrs JC, Orlando ST, Saseen JJ, Novins-Montague S, Sandy LC, Waughtal J, Glorioso TJ, Ho PM. Description of patient questions received by clinical pharmacists in the Nudge Study. Am J Health Syst Pharm. 2023 09 07; 80(18):1247-1254.
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