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John Monroe Heumann

TitleResearch Associate
InstitutionUniversity of Colorado Boulder
DepartmentBiology-MCD Instruction
Phone303/735-1690

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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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    1. Karolczak J, Przybylowska A, Szewczyk K, Taisner W, Heumann JM, Stowell MHB, Nowicki M, Brzezinski D. Ligand identification in CryoEM and X-ray maps using deep learning. Bioinformatics. 2024 12 26; 41(1). PMID: 39700427.
      View in: PubMed
    2. Karolczak J, Przybylowska A, Szewczyk K, Taisner W, Heumann JM, Stowell MHB, Nowicki M, Brzezinski D. Ligand Identification in CryoEM and X-ray Maps Using Deep Learning. bioRxiv. 2024 Dec 09. PMID: 39257821.
      View in: PubMed
    3. Pra??k V, Mironova Y, Vasishtan D, Hagen C, Laugks U, Jensen Y, Sanders S, Heumann JM, Bosse JB, Klupp BG, Mettenleiter TC, Grange M, Gr?newald K. Molecular plasticity of herpesvirus nuclear egress analysed in situ. Nat Microbiol. 2024 Jul; 9(7):1842-1855. PMID: 38918469.
      View in: PubMed
    4. Bousquet C, Heumann JM, Chr?tien D, Guyomar C. Characterization of Microtubule Lattice Heterogeneity by Segmented Subtomogram Averaging. Bio Protoc. 2023 Jul 20; 13(14):e4723. PMID: 37497446.
      View in: PubMed
    5. Guyomar C, Bousquet C, Ku S, Heumann JM, Guilloux G, Gaillard N, Heichette C, Duchesne L, Steinmetz MO, Gibeaux R, Chr?tien D. Changes in seam number and location induce holes within microtubules assembled from porcine brain tubulin and in Xenopus egg cytoplasmic extracts. Elife. 2022 12 12; 11. PMID: 36503602.
      View in: PubMed
    6. Peck A, Yao Q, Brewster AS, Zwart PH, Heumann JM, Sauter NK, Jensen GJ. Challenges in solving structures from radiation-damaged tomograms of protein nanocrystals assessed by simulation. Acta Crystallogr D Struct Biol. 2021 May 01; 77(Pt 5):572-586. PMID: 33950014.
      View in: PubMed
    7. Burgoyne T, Heumann JM, Morris EP, Knupp C, Liu J, Reedy MK, Taylor KA, Wang K, Luther PK. Three-dimensional structure of the basketweave Z-band in midshipman fish sonic muscle. Proc Natl Acad Sci U S A. 2019 07 30; 116(31):15534-15539. PMID: 31320587.
      View in: PubMed
    8. Maity K, Heumann JM, McGrath AP, Kopcho NJ, Hsu PK, Lee CW, Mapes JH, Garza D, Krishnan S, Morgan GP, Hendargo KJ, Klose T, Rees SD, Medrano-Soto A, Saier MH, Pi?eros M, Komives EA, Schroeder JI, Chang G, Stowell MHB. Cryo-EM structure of OSCA1.2 from Oryza sativa elucidates the mechanical basis of potential membrane hyperosmolality gating. Proc Natl Acad Sci U S A. 2019 07 09; 116(28):14309-14318. PMID: 31227607.
      View in: PubMed
    9. Zabeo D, Heumann JM, Schwartz CL, Suzuki-Shinjo A, Morgan G, Widlund PO, H??g JL. A lumenal interrupted helix in human sperm tail microtubules. Sci Rep. 2018 02 09; 8(1):2727. PMID: 29426884.
      View in: PubMed
    10. Brown JR, Schwartz CL, Heumann JM, Dawson SC, Hoenger A. A detailed look at the cytoskeletal architecture of the Giardia lamblia ventral disc. J Struct Biol. 2016 Apr; 194(1):38-48. PMID: 26821343.
      View in: PubMed
    11. Basta T, Wu HJ, Morphew MK, Lee J, Ghosh N, Lai J, Heumann JM, Wang K, Lee YC, Rees DC, Stowell MH. Self-assembled lipid and membrane protein polyhedral nanoparticles. Proc Natl Acad Sci U S A. 2014 Jan 14; 111(2):670-4. PMID: 24379376.
      View in: PubMed
    12. Schwartz CL, Heumann JM, Dawson SC, Hoenger A. A detailed, hierarchical study of Giardia lamblia's ventral disc reveals novel microtubule-associated protein complexes. PLoS One. 2012; 7(9):e43783. PMID: 22984443.
      View in: PubMed
    13. Cope J, Heumann J, Hoenger A. Cryo-electron tomography for structural characterization of macromolecular complexes. Curr Protoc Protein Sci. 2011 Aug; Chapter 17:Unit17.13. PMID: 21842467.
      View in: PubMed
    14. Heumann JM, Hoenger A, Mastronarde DN. Clustering and variance maps for cryo-electron tomography using wedge-masked differences. J Struct Biol. 2011 Sep; 175(3):288-99. PMID: 21616153.
      View in: PubMed
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