 Software
"Software" is a descriptor in the National Library of Medicine's controlled vocabulary thesaurus,
MeSH (Medical Subject Headings). Descriptors are arranged in a hierarchical structure,
which enables searching at various levels of specificity.
Sequential operating programs and data which instruct the functioning of a digital computer.
| Descriptor ID |
D012984
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| MeSH Number(s) |
L01.224.900
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| Concept/Terms |
Software- Software
- Computer Software
- Software, Computer
- Computer Programs
- Computer Program
- Program, Computer
- Programs, Computer
Software Tools- Software Tools
- Software Tool
- Tool, Software
- Tools, Software
Computer Applications Software- Computer Applications Software
- Applications Software, Computer
- Applications Softwares, Computer
- Computer Applications Softwares
- Software, Computer Applications
- Softwares, Computer Applications
- Computer Software Applications
- Application, Computer Software
- Applications, Computer Software
- Computer Software Application
- Software Application, Computer
- Software Applications, Computer
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Below are MeSH descriptors whose meaning is more general than "Software".
Below are MeSH descriptors whose meaning is more specific than "Software".
This graph shows the total number of publications written about "Software" by people in this website by year, and whether "Software" was a major or minor topic of these publications.
To see the data from this visualization as text, click here.
| Year | Major Topic | Minor Topic | Total |
|---|
| 1995 | 0 | 2 | 2 | | 1996 | 1 | 0 | 1 | | 1997 | 0 | 3 | 3 | | 1998 | 1 | 2 | 3 | | 1999 | 1 | 3 | 4 | | 2000 | 0 | 2 | 2 | | 2002 | 1 | 5 | 6 | | 2003 | 0 | 3 | 3 | | 2004 | 1 | 8 | 9 | | 2005 | 3 | 9 | 12 | | 2006 | 4 | 8 | 12 | | 2007 | 6 | 11 | 17 | | 2008 | 9 | 10 | 19 | | 2009 | 12 | 6 | 18 | | 2010 | 11 | 9 | 20 | | 2011 | 12 | 21 | 33 | | 2012 | 15 | 13 | 28 | | 2013 | 12 | 11 | 23 | | 2014 | 17 | 8 | 25 | | 2015 | 15 | 6 | 21 | | 2016 | 8 | 12 | 20 | | 2017 | 12 | 15 | 27 | | 2018 | 12 | 13 | 25 | | 2019 | 12 | 11 | 23 | | 2020 | 10 | 8 | 18 | | 2021 | 11 | 11 | 22 | | 2022 | 10 | 6 | 16 | | 2023 | 9 | 11 | 20 | | 2024 | 8 | 11 | 19 | | 2025 | 9 | 6 | 15 |
To return to the timeline, click here.
Below are the most recent publications written about "Software" by people in Profiles.
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Kalinin AA, Arevalo J, Serrano E, Vulliard L, Tsang H, Bornholdt M, Mu?oz AF, Sivagurunathan S, Rajwa B, Carpenter AE, Way GP, Singh S. A versatile information retrieval framework for evaluating profile strength and similarity. Nat Commun. 2025 Jun 04; 16(1):5181.
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Briggs JK, Jin E, Merrins MJ, Benninger RKP. CRISP: correlation-refined image segmentation process. BMC Bioinformatics. 2025 May 26; 26(1):135.
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Lu D, Kalantar KL, Glascock AL, Chu VT, Guerrero ES, Bernick N, Butcher X, Ewing K, Fahsbender E, Holmes O, Hoops E, Jones AE, Lim R, McCanny S, Reynoso L, Rosario K, Tang J, Valenzuela O, Mourani PM, Pickering AJ, Raphenya AR, Alcock BP, McArthur AG, Langelier CR. Simultaneous detection of pathogens and antimicrobial resistance genes with the open source, cloud-based, CZ ID platform. Genome Med. 2025 May 06; 17(1):46.
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Jones T, Sigauke RF, Sanford L, Taatjes DJ, Allen MA, Dowell RD. TF Profiler: a transcription factor inference method that broadly measures transcription factor activity and identifies mechanistically distinct networks. Genome Biol. 2025 Apr 09; 26(1):92.
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Santhanam N, Sanchez-Roige S, Mi S, Liang Y, Chitre AS, Munro D, Chen D, Gao J, Garcia-Martinez A, George AM, Gileta AF, Han W, Holl K, Hughson A, King CP, Lamparelli AC, Martin CD, Nyasimi F, St Pierre CL, Sumner S, Tripi J, Wang T, Chen H, Flagel S, Ishiwari K, Meyer P, Polesskaya O, Saba L, Solberg Woods LC, Palmer AA, Im HK. RatXcan: A framework for cross-species integration of genome-wide association and gene expression data. PLoS Genet. 2025 Mar; 21(3):e1011583.
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Currie J, Ng DCM, Pandi B, Black A, Manda V, Durham C, Pavelka J, Lam MPY, Lau E. Improved Method to Determine Protein Turnover Rates with Heavy Water Labeling by Mass Isotopomer Ratio Selection. J Proteome Res. 2025 Apr 04; 24(4):1992-2005.
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Serrano E, Chandrasekaran SN, Bunten D, Brewer KI, Tomkinson J, Kern R, Bornholdt M, Fleming SJ, Pei R, Arevalo J, Tsang H, Rubinetti V, Tromans-Coia C, Becker T, Weisbart E, Bunne C, Kalinin AA, Senft R, Taylor SJ, Jamali N, Adeboye A, Abbasi HS, Goodman A, Caicedo JC, Carpenter AE, Cimini BA, Singh S, Way GP. Reproducible image-based profiling with Pycytominer. Nat Methods. 2025 Apr; 22(4):677-680.
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Bradshaw MS, Raychaudhuri J, Murphy L, Barnard R, Firman T, Gaskell AA, Layer RM. Rapid, Reliable, and Interpretable Copy Number Variant Curation Visualizations for Diagnostic Settings with SeeNV. J Mol Diagn. 2025 May; 27(5):336-345.
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Castelli EC, Pereira RN, Paes GS, Andrade HS, Ferreira MR, de Freitas Santos ?S, Vince N, Pollock NR, Norman PJ, Meyer D. kir-mapper: A Toolkit for Killer-Cell Immunoglobulin-Like Receptor (KIR) Genotyping From Short-Read Second-Generation Sequencing Data. HLA. 2025 Mar; 105(3):e70092.
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Henen MA, McCall D, Jones D, Ahn NG, V?geli B. Protocol for converting assigned nuclear Overhauser enhancement spectroscopy series peaks into exact distance restraints using MATLAB- or CYANA-eNORA. STAR Protoc. 2025 Mar 21; 6(1):103653.
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