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Christopher Peter Calderon

TitleAsst Professor Adjunct
InstitutionUniversity of Colorado Boulder
DepartmentChemical & Biological Engin

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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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    1. Calderon CP. Motion blur filtering: A statistical approach for extracting confinement forces and diffusivity from a single blurred trajectory. Phys Rev E. 2016 May; 93(5):053303. PMID: 27301001.
      View in: PubMed
    2. Calderon CP, Bloom K. Inferring Latent States and Refining Force Estimates via Hierarchical Dirichlet Process Modeling in Single Particle Tracking Experiments. PLoS One. 2015; 10(9):e0137633. PMID: 26384324; PMCID: PMC4575198.
    3. Calderon CP. Correction: Calderon, C.P. Data-Driven Techniques for Detecting Dynamical State Changes in Noisily Measured 3D Single-Molecule Trajectories. Molecules 19, 18381-18398. Molecules. 2015 Feb 09; 20(2):2828-30. PMID: 25671332.
      View in: PubMed
    4. Calderon CP. Data-driven techniques for detecting dynamical state changes in noisily measured 3D single-molecule trajectories. Molecules. 2014 Nov 12; 19(11):18381-98. PMID: 25397733.
      View in: PubMed
    5. Calderon CP, Weiss LE, Moerner WE. Robust hypothesis tests for detecting statistical evidence of two-dimensional and three-dimensional interactions in single-molecule measurements. Phys Rev E Stat Nonlin Soft Matter Phys. 2014 May; 89(5):052705. PMID: 25353827.
      View in: PubMed
    6. Calderon CP, Thompson MA, Casolari JM, Paffenroth RC, Moerner WE. Quantifying transient 3D dynamical phenomena of single mRNA particles in live yeast cell measurements. J Phys Chem B. 2013 Dec 12; 117(49):15701-13. PMID: 24015725; PMCID: PMC3865222.
    7. Calderon CP. Correcting for bias of molecular confinement parameters induced by small-time-series sample sizes in single-molecule trajectories containing measurement noise. Phys Rev E Stat Nonlin Soft Matter Phys. 2013 Jul; 88(1):012707. PMID: 23944492.
      View in: PubMed
    8. Calderon CP. Estimation and Inference of Diffusion Coefficients in Complex Biomolecular Environments. J Chem Theory Comput. 2011 Feb 08; 7(2):280-90. PMID: 26596151.
      View in: PubMed
    9. Calderon CP. Detection of subtle dynamical changes induced by unresolved "conformational coordinates" in single-molecule trajectories via goodness-of-fit tests. J Phys Chem B. 2010 Mar 11; 114(9):3242-53. PMID: 20148536.
      View in: PubMed
    10. Calderon CP, Martinez JG, Carroll RJ, Sorensen DC. P-SPLINES USING DERIVATIVE INFORMATION. Multiscale Model Simul. 2010; 8(4):1562-1580. PMID: 21691592.
      View in: PubMed
    11. Calderon CP. Data-driven approach to decomposing complex enzyme kinetics with surrogate models. Phys Rev E Stat Nonlin Soft Matter Phys. 2009 Dec; 80(6 Pt 1):061118. PMID: 20365129.
      View in: PubMed
    12. Calderon CP, Harris NC, Kiang CH, Cox DD. Analyzing single-molecule manipulation experiments. J Mol Recognit. 2009 Sep-Oct; 22(5):356-62. PMID: 19479747; PMCID: PMC2760430.
    13. Calderon CP, Arora K. Extracting Kinetic and Stationary Distribution Information from Short MD Trajectories via a Collection of Surrogate Diffusion Models. J Chem Theory Comput. 2009 Aug 11; 5(8):2192. PMID: 26613159.
      View in: PubMed
    14. Calderon CP, Janosi L, Kosztin I. Using stochastic models calibrated from nanosecond nonequilibrium simulations to approximate mesoscale information. J Chem Phys. 2009 Apr 14; 130(14):144908. PMID: 19368472; PMCID: PMC2832035.
    15. Calderon CP, Chen WH, Lin KJ, Harris NC, Kiang CH. Quantifying DNA melting transitions using single-molecule force spectroscopy. J Phys Condens Matter. 2009 Jan 21; 21(3):34114. PMID: 20046972.
      View in: PubMed
    16. Calderon CP, Harris NC, Kiang CH, Cox DD. Quantifying multiscale noise sources in single-molecule time series. J Phys Chem B. 2009 Jan 08; 113(1):138-48. PMID: 19072043; PMCID: PMC2682735.
    17. Calderon CP, Arora K. Extracting Kinetic and Stationary Distribution Information from Short MD Trajectories via a Collection of Surrogate Diffusion Models. J Chem Theory Comput. 2009 Jan 01; 5(1):47-58. PMID: 20046947.
      View in: PubMed
    18. Calderon CP, Chelli R. Approximating nonequilibrium processes using a collection of surrogate diffusion models. J Chem Phys. 2008 Apr 14; 128(14):145103. PMID: 18412481.
      View in: PubMed
    19. Calderon CP. On the use of local diffusion models for path ensemble averaging in potential of mean force computations. J Chem Phys. 2007 Feb 28; 126(8):084106. PMID: 17343439.
      View in: PubMed
    20. Calderon CP, Ashurst WT. Comment on "reversing the perturbation in nonequilibrium molecular dynamics: an easy way to calculate the shear viscosity of fluids". Phys Rev E Stat Nonlin Soft Matter Phys. 2002 Jul; 66(1 Pt 1):013201. PMID: 12241405.
      View in: PubMed
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