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Search Results to John Rinn

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Rinn, John

One or more keywords matched the following items that are connected to Rinn, John

Item Type	Name
Concept	Sequence Analysis, RNA
Concept	RNA Processing, Post-Transcriptional
Concept	RNA Polymerase III
Concept	RNA
Concept	RNA, Small Interfering
Concept	RNA, Protozoan
Concept	RNA Precursors
Concept	RNA Interference
Concept	RNA Editing
Concept	RNA, Catalytic
Concept	RNA Polymerase II
Concept	RNA Cap-Binding Proteins
Concept	RNA, Fungal
Concept	RNA Splicing
Concept	RNA, Untranslated
Concept	Regulatory Sequences, Ribonucleic Acid
Concept	RNA-Binding Proteins
Concept	RNA Stability
Concept	RNA, Messenger
Concept	RNA Transport
Academic Article	A global transcriptional analysis of Plasmodium falciparum malaria reveals a novel family of telomere-associated lncRNAs.
Academic Article	'Lnc'-ing enhancers to MYC regulation.
Academic Article	Long noncoding RNAs regulate adipogenesis.
Academic Article	Silent pericentromeric repeats speak out.
Academic Article	Differential analysis of gene regulation at transcript resolution with RNA-seq.
Academic Article	The reality of pervasive transcription.
Academic Article	"Cat's Cradling" the 3D Genome by the Act of LncRNA Transcription.
Academic Article	lincRNAs act in the circuitry controlling pluripotency and differentiation.
Academic Article	Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclasses.
Academic Article	Non-coding RNAs as regulators of embryogenesis.
Academic Article	lncRNAs: linking RNA to chromatin.
Academic Article	Chromatin signature of embryonic pluripotency is established during genome activation.
Academic Article	RNA-protein interactions in human health and disease.
Academic Article	Long non-coding RNA HOTAIR reprograms chromatin state to promote cancer metastasis.
Academic Article	LINC00520 is induced by Src, STAT3, and PI3K and plays a functional role in breast cancer.
Academic Article	Strand-specific RNA sequencing in Plasmodium falciparum malaria identifies developmentally regulated long non-coding RNA and circular RNA.
Academic Article	RNA Function. RNA and dynamic nuclear organization.
Academic Article	Computational analysis of noncoding RNAs.
Academic Article	Visualization of lncRNA by single-molecule fluorescence in situ hybridization.
Academic Article	Transposable elements modulate human RNA abundance and splicing via specific RNA-protein interactions.
Academic Article	Many human large intergenic noncoding RNAs associate with chromatin-modifying complexes and affect gene expression.
Academic Article	Systematic identification of long noncoding RNAs expressed during zebrafish embryogenesis.
Academic Article	RNase-mediated protein footprint sequencing reveals protein-binding sites throughout the human transcriptome.
Academic Article	The multilayered complexity of ceRNA crosstalk and competition.
Academic Article	'Oming in on RNA-protein interactions.
Academic Article	Lin28a transgenic mice manifest size and puberty phenotypes identified in human genetic association studies.
Academic Article	Discovery and annotation of long noncoding RNAs.
Academic Article	Transposable elements reveal a stem cell-specific class of long noncoding RNAs.
Academic Article	Control of somatic tissue differentiation by the long non-coding RNA TINCR.
Academic Article	Genome-wide RNA-Seq of Human Motor Neurons Implicates Selective ER Stress Activation in Spinal Muscular Atrophy.
Academic Article	Linking RNA biology to lncRNAs.
Academic Article	Pint lincRNA connects the p53 pathway with epigenetic silencing by the Polycomb repressive complex 2.
Academic Article	Large intergenic non-coding RNA-RoR modulates reprogramming of human induced pluripotent stem cells.
Academic Article	DNMT1-interacting RNAs block gene-specific DNA methylation.
Academic Article	Expression of Shal potassium channel subunits in the adult and developing cochlear nucleus of the mouse.
Academic Article	Genome regulation by long noncoding RNAs.
Academic Article	Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals.
Academic Article	Integrative genomic analysis reveals widespread enhancer regulation by p53 in response to DNA damage.
Academic Article	Myo2p, a class V myosin in budding yeast, associates with a large ribonucleic acid-protein complex that contains mRNAs and subunits of the RNA-processing body.
Academic Article	Diverse Phenotypes and Specific Transcription Patterns in Twenty Mouse Lines with Ablated LincRNAs.
Academic Article	Mechanisms of Long Non-coding RNAs in Mammalian Nervous System Development, Plasticity, Disease, and Evolution.
Academic Article	Poly-combing the genome for RNA.
Academic Article	The histone chaperone CAF-1 safeguards somatic cell identity.
Academic Article	Scaffold function of long non-coding RNA HOTAIR in protein ubiquitination.
Academic Article	In?Vivo Characterization of Linc-p21 Reveals Functional cis-Regulatory DNA Elements.
Academic Article	Targeted RNA sequencing reveals the deep complexity of the human transcriptome.
Academic Article	RNA traffic control of chromatin complexes.
Academic Article	Multiple knockout mouse models reveal lincRNAs are required for life and brain development.
Academic Article	Identification of novel functional elements in the human genome.
Academic Article	Multiplexable, locus-specific targeting of long RNAs with CRISPR-Display.
Academic Article	In vivo Ebola virus infection leads to a strong innate response in circulating immune cells.
Academic Article	Spatiotemporal expression and transcriptional perturbations by long noncoding RNAs in the mouse brain.
Academic Article	Improving RNA-Seq expression estimates by correcting for fragment bias.
Academic Article	Topological organization of multichromosomal regions by the long intergenic noncoding RNA Firre.
Academic Article	Transcriptional silencing of long noncoding RNA GNG12-AS1 uncouples its transcriptional and product-related functions.
Academic Article	Global identification of human transcribed sequences with genome tiling arrays.
Academic Article	Ribosome profiling reveals resemblance between long non-coding RNAs and 5' leaders of coding RNAs.
Academic Article	linc-HOXA1 is a noncoding RNA that represses Hoxa1 transcription in cis.
Academic Article	Widespread RNA binding by chromatin-associated proteins.
Academic Article	Localization and abundance analysis of human lncRNAs at single-cell and single-molecule resolution.
Academic Article	Suppression of progenitor differentiation requires the long noncoding RNA ANCR.
Academic Article	Functional demarcation of active and silent chromatin domains in human HOX loci by noncoding RNAs.
Academic Article	Neat1 is a p53-inducible lincRNA essential for transformation suppression.
Academic Article	Modular regulatory principles of large non-coding RNAs.
Academic Article	Chromatin environment, transcriptional regulation, and splicing distinguish lincRNAs and mRNAs.
Academic Article	Integrative analyses reveal a long noncoding RNA-mediated sponge regulatory network in prostate cancer.
Academic Article	A large intergenic noncoding RNA induced by p53 mediates global gene repression in the p53 response.
Academic Article	Function and evolution of local repeats in the Firre locus.
Academic Article	Large non-coding RNAs: missing links in cancer?
Academic Article	Peptidomic discovery of short open reading frame-encoded peptides in human cells.
Academic Article	To repress or not to repress: this is the guardian's question.
Academic Article	Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks.
Academic Article	Identification of proteins binding coding and non-coding human RNAs using protein microarrays.
Academic Article	lncRNA requirements for mouse acute myeloid leukemia and normal differentiation.
Academic Article	Ab initio reconstruction of cell type-specific transcriptomes in mouse reveals the conserved multi-exonic structure of lincRNAs.
Academic Article	The long non-coding RNA Morrbid regulates Bim and short-lived myeloid cell lifespan.
Academic Article	Unbiased reconstruction of a mammalian transcriptional network mediating pathogen responses.
Academic Article	Group 1 Innate Lymphoid Cell Lineage Identity Is Determined by a cis-Regulatory Element Marked by a Long Non-coding RNA.
Academic Article	Live-cell mapping of organelle-associated RNAs via proximity biotinylation combined with protein-RNA crosslinking.
Academic Article	High-throughput identification of RNA nuclear enrichment sequences.
Academic Article	DeCoN: genome-wide analysis of in vivo transcriptional dynamics during pyramidal neuron fate selection in neocortex.
Academic Article	Genome-wide measurement of RNA secondary structure in yeast.
Academic Article	A TAD boundary is preserved upon deletion of the CTCF-rich Firre locus.
Academic Article	An Integrated Genome-wide CRISPRa Approach to Functionalize lncRNAs in Drug Resistance.
Academic Article	A CLK3-HMGA2 Alternative Splicing Axis Impacts Human Hematopoietic Stem Cell Molecular Identity throughout Development.
Academic Article	Interchromosomal interactions: A genomic love story of kissing chromosomes.
Academic Article	Aligning Single-Cell Developmental and Reprogramming Trajectories Identifies Molecular Determinants of Myogenic Reprogramming Outcome.
Academic Article	Genetic Models Reveal cis and trans Immune-Regulatory Activities for lincRNA-Cox2.
Academic Article	Enhancers in the Peril lincRNA locus regulate distant but not local genes.
Academic Article	High-throughput functional analysis of lncRNA core promoters elucidates rules governing tissue specificity.
Concept	RNA, Small Untranslated
Concept	RNA Isoforms
Concept	RNA Folding
Concept	RNA, Long Noncoding
Academic Article	Illuminating Genomic Dark Matter with RNA Imaging.
Academic Article	Differential contribution of steady-state RNA and active transcription in chromatin organization.
Academic Article	Single-cell imaging reveals unexpected heterogeneity of telomerase reverse transcriptase expression across human cancer cell lines.
Academic Article	RNA-seq as a tool for evaluating human embryo competence.
Academic Article	Linking long noncoding RNA to drug resistance.
Academic Article	The Firre locus produces a trans-acting RNA molecule that functions in hematopoiesis.
Academic Article	In vivo Firre and Dxz4 deletion elucidates roles for autosomal gene regulation.
Academic Article	The Sox2 transcription factor binds RNA.
Academic Article	Long Noncoding RNAs: Molecular Modalities to Organismal Functions.
Academic Article	RNA is essential for PRC2 chromatin occupancy and function in human pluripotent stem cells.
Academic Article	Expanded encyclopaedias of DNA elements in the human and mouse genomes.
Academic Article	The Tug1 lncRNA locus is essential for male fertility.
Academic Article	Identification of human long noncoding RNAs associated with nonalcoholic fatty liver disease and metabolic homeostasis.
Academic Article	Single-Cell Profiling of Ebola Virus Disease In?Vivo Reveals Viral and Host Dynamics.
Academic Article	Trans- and cis-acting effects of Firre on epigenetic features of the inactive X chromosome.
Academic Article	An in vivo screen of noncoding loci reveals that Daedalus is a gatekeeper of an Ikaros-dependent checkpoint during haematopoiesis.
Academic Article	Myosin 7b is a regulatory long noncoding RNA (lncMYH7b) in the human heart.
Academic Article	Nuclear compartmentalization of TERT mRNA and TUG1 lncRNA is driven by intron retention.
Academic Article	Diverse epigenetic mechanisms maintain parental imprints within the embryonic and extraembryonic lineages.
Academic Article	Genome-wide CRISPR interference screen identifies long non-coding RNA loci required for differentiation and pluripotency.
Academic Article	Noncoding RNAs: biology and applications-a Keystone Symposia report.
Academic Article	Evolutionary divergence of Firre localization and expression.
Academic Article	DNMT1 inhibition by pUG-fold quadruplex RNA.
Academic Article	Long non-coding RNAs: definitions, functions, challenges and recommendations.
Academic Article	T-REX17 is a transiently expressed non-coding RNA essential for human endoderm formation.
Academic Article	Single-cell profiling of lncRNA expression during Ebola virus infection in rhesus macaques.
Academic Article	Evaluation of the RNA-dependence of PRC2 binding to chromatin in human pluripotent stem cells.

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