RNAlign2D: a rapid method for combined RNA structure and sequence-based alignment using a pseudo-amino acid substitution matrix.
Wozniak T, Sajek M, Jaruzelska J, Sajek MP. RNAlign2D: a rapid method for combined RNA structure and sequence-based alignment using a pseudo-amino acid substitution matrix. BMC Bioinformatics. 2021 Oct 16; 22(1):504.