 Connection
Gregg Beckham to Catalytic Domain
This is a "connection" page, showing publications Gregg Beckham has written about Catalytic Domain.
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Connection Strength |
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1.747 |
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Sammond DW, Payne CM, Brunecky R, Himmel ME, Crowley MF, Beckham GT. Cellulase linkers are optimized based on domain type and function: insights from sequence analysis, biophysical measurements, and molecular simulation. PLoS One. 2012; 7(11):e48615.
Score: 0.393
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Gado JE, Harrison BE, Sandgren M, St?hlberg J, Beckham GT, Payne CM. Machine learning reveals sequence-function relationships in family 7 glycoside hydrolases. J Biol Chem. 2021 Aug; 297(2):100931.
Score: 0.179
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Prates ET, Crowley MF, Skaf MS, Beckham GT. Catalytic Mechanism of Aryl-Ether Bond Cleavage in Lignin by LigF and LigG. J Phys Chem B. 2019 12 05; 123(48):10142-10151.
Score: 0.160
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Taylor LE, Knott BC, Baker JO, Alahuhta PM, Hobdey SE, Linger JG, Lunin VV, Amore A, Subramanian V, Podkaminer K, Xu Q, VanderWall TA, Schuster LA, Chaudhari YB, Adney WS, Crowley MF, Himmel ME, Decker SR, Beckham GT. Engineering enhanced cellobiohydrolase activity. Nat Commun. 2018 03 22; 9(1):1186.
Score: 0.142
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Ito T, Saikawa K, Kim S, Fujita K, Ishiwata A, Kaeothip S, Arakawa T, Wakagi T, Beckham GT, Ito Y, Fushinobu S. Crystal structure of glycoside hydrolase family 127 ?-l-arabinofuranosidase from Bifidobacterium longum. Biochem Biophys Res Commun. 2014 Apr 25; 447(1):32-7.
Score: 0.108
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Knott BC, Haddad Momeni M, Crowley MF, Mackenzie LF, G?tz AW, Sandgren M, Withers SG, St?hlberg J, Beckham GT. The mechanism of cellulose hydrolysis by a two-step, retaining cellobiohydrolase elucidated by structural and transition path sampling studies. J Am Chem Soc. 2014 Jan 08; 136(1):321-9.
Score: 0.106
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Kim S, St?hlberg J, Sandgren M, Paton RS, Beckham GT. Quantum mechanical calculations suggest that lytic polysaccharide monooxygenases use a copper-oxyl, oxygen-rebound mechanism. Proc Natl Acad Sci U S A. 2014 Jan 07; 111(1):149-54.
Score: 0.106
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Payne CM, Resch MG, Chen L, Crowley MF, Himmel ME, Taylor LE, Sandgren M, St?hlberg J, Stals I, Tan Z, Beckham GT. Glycosylated linkers in multimodular lignocellulose-degrading enzymes dynamically bind to cellulose. Proc Natl Acad Sci U S A. 2013 Sep 03; 110(36):14646-51.
Score: 0.104
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Taylor CB, Payne CM, Himmel ME, Crowley MF, McCabe C, Beckham GT. Binding site dynamics and aromatic-carbohydrate interactions in processive and non-processive family 7 glycoside hydrolases. J Phys Chem B. 2013 May 02; 117(17):4924-33.
Score: 0.101
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Beckham GT, Matthews JF, Bomble YJ, Bu L, Adney WS, Himmel ME, Nimlos MR, Crowley MF. Identification of amino acids responsible for processivity in a Family 1 carbohydrate-binding module from a fungal cellulase. J Phys Chem B. 2010 Jan 28; 114(3):1447-53.
Score: 0.081
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Bharadwaj VS, Knott BC, St?hlberg J, Beckham GT, Crowley MF. The hydrolysis mechanism of a GH45 cellulase and its potential relation to lytic transglycosylase and expansin function. J Biol Chem. 2020 04 03; 295(14):4477-4487.
Score: 0.041
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Vermaas JV, Kont R, Beckham GT, Crowley MF, Gudmundsson M, Sandgren M, St?hlberg J, V?ljam?e P, Knott BC. The dissociation mechanism of processive cellulases. Proc Natl Acad Sci U S A. 2019 11 12; 116(46):23061-23067.
Score: 0.040
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Jana S, Hamre AG, Wildberger P, Holen MM, Eijsink VG, Beckham GT, S?rlie M, Payne CM. Aromatic-Mediated Carbohydrate Recognition in Processive Serratia marcescens Chitinases. J Phys Chem B. 2016 Feb 25; 120(7):1236-49.
Score: 0.031
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Vermaas JV, Crowley MF, Beckham GT, Payne CM. Effects of lytic polysaccharide monooxygenase oxidation on cellulose structure and binding of oxidized cellulose oligomers to cellulases. J Phys Chem B. 2015 May 21; 119(20):6129-43.
Score: 0.029
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Gudmundsson M, Kim S, Wu M, Ishida T, Momeni MH, Vaaje-Kolstad G, Lundberg D, Royant A, St?hlberg J, Eijsink VG, Beckham GT, Sandgren M. Structural and electronic snapshots during the transition from a Cu(II) to Cu(I) metal center of a lytic polysaccharide monooxygenase by X-ray photoreduction. J Biol Chem. 2014 Jul 04; 289(27):18782-92.
Score: 0.027
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Lin Y, Beckham GT, Himmel ME, Crowley MF, Chu JW. Endoglucanase peripheral loops facilitate complexation of glucan chains on cellulose via adaptive coupling to the emergent substrate structures. J Phys Chem B. 2013 Sep 19; 117(37):10750-8.
Score: 0.026
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Wu M, Beckham GT, Larsson AM, Ishida T, Kim S, Payne CM, Himmel ME, Crowley MF, Horn SJ, Westereng B, Igarashi K, Samejima M, St?hlberg J, Eijsink VG, Sandgren M. Crystal structure and computational characterization of the lytic polysaccharide monooxygenase GH61D from the Basidiomycota fungus Phanerochaete chrysosporium. J Biol Chem. 2013 May 03; 288(18):12828-39.
Score: 0.025
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Ghattyvenkatakrishna PK, Alekozai EM, Beckham GT, Schulz R, Crowley MF, Uberbacher EC, Cheng X. Initial recognition of a cellodextrin chain in the cellulose-binding tunnel may affect cellobiohydrolase directional specificity. Biophys J. 2013 Feb 19; 104(4):904-12.
Score: 0.025
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Payne CM, Baban J, Horn SJ, Backe PH, Arvai AS, Dalhus B, Bj?r?s M, Eijsink VG, S?rlie M, Beckham GT, Vaaje-Kolstad G. Hallmarks of processivity in glycoside hydrolases from crystallographic and computational studies of the Serratia marcescens chitinases. J Biol Chem. 2012 Oct 19; 287(43):36322-30.
Score: 0.024
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Connection Strength
The connection strength for concepts is the sum of the scores for each matching publication.
Publication scores are based on many factors, including how long ago they were written and whether the person is a first or senior author.
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