Connection
Tatiana Kutateladze to Histones
This is a "connection" page, showing publications Tatiana Kutateladze has written about Histones.
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22.553 |
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Vann KR, Sharma R, Hsu CC, Devoucoux M, Tencer AH, Zeng L, Lin K, Zhu L, Li Q, Lachance C, Ospina RR, Tong Q, Cheung KL, Yang S, Biswas S, Xuan H, Gatchalian J, Alamillo L, Wang J, Jang SM, Klein BJ, Lu Y, Ernst P, Strahl BD, Rothbart SB, Walsh MJ, Cleary ML, C?t? J, Shi X, Zhou MM, Kutateladze TG. Structure-function relationship of ASH1L and histone H3K36 and H3K4 methylation. Nat Commun. 2025 Mar 06; 16(1):2235.
Score: 0.653
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Gaurav N, Kanai A, Lachance C, Cox KL, Liu J, Grzybowski AT, Saksouk N, Klein BJ, Komata Y, Asada S, Ruthenburg AJ, Poirier MG, C?t? J, Yokoyama A, Kutateladze TG. Guiding the HBO1 complex function through the JADE subunit. Nat Struct Mol Biol. 2024 Jul; 31(7):1039-1049.
Score: 0.610
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Kumar Sinha V, Zhang Y, Xu L, Chen YW, Picaud S, Zandian M, Biswas S, Filippakopoulos P, Wang SP, Shi X, Kutateladze TG. Histone H4K16ac Binding Function of the Triple PHD Finger Cassette of MLL4. J Mol Biol. 2024 04 01; 436(7):168212.
Score: 0.584
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Black JC, Kutateladze TG. Atypical histone targets of PHD fingers. J Biol Chem. 2023 04; 299(4):104601.
Score: 0.569
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Nguyen MC, Strahl BD, Kutateladze TG. Engaging with benzoyllysine through a p-p-p mechanism. Curr Opin Chem Biol. 2023 Feb; 72:102252.
Score: 0.561
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Liu J, Kutateladze TG. Dietary polyphenols link extracellular histones and nonhistone proteins. J Biol Chem. 2022 12; 298(12):102651.
Score: 0.555
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Zandian M, Chen IP, Byrareddy SN, Fujimori DG, Ott M, Kutateladze TG. Catching BETs by viruses. Biochim Biophys Acta Gene Regul Mech. 2022 10; 1865(7):194859.
Score: 0.547
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Vann KR, Vishweshwaraiah YL, Dokholyan NV, Kutateladze TG. Searching for methyllysine-binding aromatic cages. Biochem J. 2021 10 15; 478(19):3613-3619.
Score: 0.517
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Zhang Y, Brown K, Yu Y, Ibrahim Z, Zandian M, Xuan H, Ingersoll S, Lee T, Ebmeier CC, Liu J, Panne D, Shi X, Ren X, Kutateladze TG. Nuclear condensates of p300 formed though the structured catalytic core can act as a storage pool of p300 with reduced HAT activity. Nat Commun. 2021 07 29; 12(1):4618.
Score: 0.509
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Vann KR, Klein BJ, Kutateladze TG. Mechanistic similarities in recognition of histone tails and DNA by epigenetic readers. Curr Opin Struct Biol. 2021 12; 71:1-6.
Score: 0.502
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Liu J, Xue Z, Zhang Y, Vann KR, Shi X, Kutateladze TG. Structural Insight into Binding of the ZZ Domain of HERC2 to Histone H3 and SUMO1. Structure. 2020 11 03; 28(11):1225-1230.e3.
Score: 0.475
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Klein BJ, Jang SM, Lachance C, Mi W, Lyu J, Sakuraba S, Krajewski K, Wang WW, Sidoli S, Liu J, Zhang Y, Wang X, Warfield BM, Kueh AJ, Voss AK, Thomas T, Garcia BA, Liu WR, Strahl BD, Kono H, Li W, Shi X, C?t? J, Kutateladze TG. Histone H3K23-specific acetylation by MORF is coupled to H3K14 acylation. Nat Commun. 2019 10 17; 10(1):4724.
Score: 0.450
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Musselman CA, Kutateladze TG. The PHD finger of Spp1 mediates histone modification cross-talk. Biochem J. 2019 08 28; 476(16):2351-2354.
Score: 0.446
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Zhang Y, Kutateladze TG. Methylation of Histone H3K79 by Dot1L Requires Multiple Contacts with the Ubiquitinated Nucleosome. Mol Cell. 2019 06 06; 74(5):862-863.
Score: 0.439
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Zhang Y, Jang Y, Lee JE, Ahn J, Xu L, Holden MR, Cornett EM, Krajewski K, Klein BJ, Wang SP, Dou Y, Roeder RG, Strahl BD, Rothbart SB, Shi X, Ge K, Kutateladze TG. Selective binding of the PHD6 finger of MLL4 to histone H4K16ac links MLL4 and MOF. Nat Commun. 2019 05 24; 10(1):2314.
Score: 0.438
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Zhang Y, Xue Y, Shi J, Ahn J, Mi W, Ali M, Wang X, Klein BJ, Wen H, Li W, Shi X, Kutateladze TG. The ZZ domain of p300 mediates specificity of the adjacent HAT domain for histone H3. Nat Struct Mol Biol. 2018 09; 25(9):841-849.
Score: 0.416
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Klein BJ, Krajewski K, Restrepo S, Lewis PW, Strahl BD, Kutateladze TG. Recognition of cancer mutations in histone H3K36 by epigenetic writers and readers. Epigenetics. 2018; 13(7):683-692.
Score: 0.415
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Zhang Y, Kutateladze TG. Switching 53BP1 on and off via Tudors. Nat Struct Mol Biol. 2018 08; 25(8):646-647.
Score: 0.414
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Musselman CA, Kutateladze TG. A histone reader becomes the readout. J Biol Chem. 2018 05 11; 293(19):7486-7487.
Score: 0.407
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Klein BJ, Ahmad S, Vann KR, Andrews FH, Mayo ZA, Bourriquen G, Bridgers JB, Zhang J, Strahl BD, C?t? J, Kutateladze TG. Yaf9 subunit of the NuA4 and SWR1 complexes targets histone H3K27ac through its YEATS domain. Nucleic Acids Res. 2018 01 09; 46(1):421-430.
Score: 0.398
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Gatchalian J, Wang X, Ikebe J, Cox KL, Tencer AH, Zhang Y, Burge NL, Di L, Gibson MD, Musselman CA, Poirier MG, Kono H, Hayes JJ, Kutateladze TG. Accessibility of the histone H3 tail in the nucleosome for binding of paired readers. Nat Commun. 2017 11 14; 8(1):1489.
Score: 0.394
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Vann KR, Kutateladze TG. Histone H3 Dual Ubiquitylation Mediates Maintenance DNA Methylation. Mol Cell. 2017 10 19; 68(2):261-262.
Score: 0.392
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Tencer AH, Cox KL, Di L, Bridgers JB, Lyu J, Wang X, Sims JK, Weaver TM, Allen HF, Zhang Y, Gatchalian J, Darcy MA, Gibson MD, Ikebe J, Li W, Wade PA, Hayes JJ, Strahl BD, Kono H, Poirier MG, Musselman CA, Kutateladze TG. Covalent Modifications of Histone H3K9 Promote Binding of CHD3. Cell Rep. 2017 Oct 10; 21(2):455-466.
Score: 0.391
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Tencer AH, Gatchalian J, Klein BJ, Khan A, Zhang Y, Strahl BD, van Wely KHM, Kutateladze TG. A Unique pH-Dependent Recognition of Methylated Histone H3K4 by PPS and DIDO. Structure. 2017 10 03; 25(10):1530-1539.e3.
Score: 0.389
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Kutateladze TG, Gozani O, Bienz M, Ostankovitch M. Histone modifications for chromatin dynamics and cellular plasticity. J Mol Biol. 2017 06 30; 429(13):1921-1923.
Score: 0.384
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Klein BJ, Simithy J, Wang X, Ahn J, Andrews FH, Zhang Y, C?t? J, Shi X, Garcia BA, Kutateladze TG. Recognition of Histone H3K14 Acylation by MORF. Structure. 2017 04 04; 25(4):650-654.e2.
Score: 0.375
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Klein BJ, Wang X, Cui G, Yuan C, Botuyan MV, Lin K, Lu Y, Wang X, Zhao Y, Bruns CJ, Mer G, Shi X, Kutateladze TG. PHF20 Readers Link Methylation of Histone H3K4 and p53 with H4K16 Acetylation. Cell Rep. 2016 10 18; 17(4):1158-1170.
Score: 0.365
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Gatchalian J, Ali M, Andrews FH, Zhang Y, Barrett AS, Kutateladze TG. Structural Insight into Recognition of Methylated Histone H3K4 by Set3. J Mol Biol. 2017 06 30; 429(13):2066-2074.
Score: 0.364
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Andrews FH, Strahl BD, Kutateladze TG. Insights into newly discovered marks and readers of epigenetic information. Nat Chem Biol. 2016 Aug 18; 12(9):662-8.
Score: 0.361
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Andrews FH, Shinsky SA, Shanle EK, Bridgers JB, Gest A, Tsun IK, Krajewski K, Shi X, Strahl BD, Kutateladze TG. The Taf14 YEATS domain is a reader of histone crotonylation. Nat Chem Biol. 2016 06; 12(6):396-8.
Score: 0.353
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Musselman CA, Kutateladze TG. Preparation, Biochemical Analysis, and Structure Determination of Methyllysine Readers. Methods Enzymol. 2016; 573:345-62.
Score: 0.348
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Andrews FH, Gatchalian J, Krajewski K, Strahl BD, Kutateladze TG. Regulation of Methyllysine Readers through Phosphorylation. ACS Chem Biol. 2016 Mar 18; 11(3):547-53.
Score: 0.346
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Allen HF, Daze KD, Shimbo T, Lai A, Musselman CA, Sims JK, Wade PA, Hof F, Kutateladze TG. Inhibition of histone binding by supramolecular hosts. Biochem J. 2014 May 01; 459(3):505-12.
Score: 0.308
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Musselman CA, Khorasanizadeh S, Kutateladze TG. Towards understanding methyllysine readout. Biochim Biophys Acta. 2014 Aug; 1839(8):686-93.
Score: 0.307
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Klein BJ, Piao L, Xi Y, Rincon-Arano H, Rothbart SB, Peng D, Wen H, Larson C, Zhang X, Zheng X, Cortazar MA, Pe?a PV, Mangan A, Bentley DL, Strahl BD, Groudine M, Li W, Shi X, Kutateladze TG. The histone-H3K4-specific demethylase KDM5B binds to its substrate and product through distinct PHD fingers. Cell Rep. 2014 Jan 30; 6(2):325-35.
Score: 0.302
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Musselman CA, Gibson MD, Hartwick EW, North JA, Gatchalian J, Poirier MG, Kutateladze TG. Binding of PHF1 Tudor to H3K36me3 enhances nucleosome accessibility. Nat Commun. 2013; 4:2969.
Score: 0.281
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Musselman CA, Lalonde ME, C?t? J, Kutateladze TG. Perceiving the epigenetic landscape through histone readers. Nat Struct Mol Biol. 2012 Dec; 19(12):1218-27.
Score: 0.279
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Musselman CA, Avvakumov N, Watanabe R, Abraham CG, Lalonde ME, Hong Z, Allen C, Roy S, Nu?ez JK, Nickoloff J, Kulesza CA, Yasui A, C?t? J, Kutateladze TG. Molecular basis for H3K36me3 recognition by the Tudor domain of PHF1. Nat Struct Mol Biol. 2012 Dec; 19(12):1266-72.
Score: 0.278
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Ali M, Yan K, Lalonde ME, Degerny C, Rothbart SB, Strahl BD, C?t? J, Yang XJ, Kutateladze TG. Tandem PHD fingers of MORF/MOZ acetyltransferases display selectivity for acetylated histone H3 and are required for the association with chromatin. J Mol Biol. 2012 Dec 14; 424(5):328-38.
Score: 0.277
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Kutateladze TG. Histone deacetylation: IP4 is an epigenetic coregulator. Nat Chem Biol. 2012 Feb 15; 8(3):230-1.
Score: 0.264
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Kutateladze TG. SnapShot: Histone readers. Cell. 2011 Sep 02; 146(5):842-842.e1.
Score: 0.256
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Musselman CA, Kutateladze TG. Handpicking epigenetic marks with PHD fingers. Nucleic Acids Res. 2011 Nov; 39(21):9061-71.
Score: 0.255
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Musselman CA, Mansfield RE, Garske AL, Davrazou F, Kwan AH, Oliver SS, O'Leary H, Denu JM, Mackay JP, Kutateladze TG. Binding of the CHD4 PHD2 finger to histone H3 is modulated by covalent modifications. Biochem J. 2009 Sep 25; 423(2):179-87.
Score: 0.224
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Champagne KS, Kutateladze TG. Structural insight into histone recognition by the ING PHD fingers. Curr Drug Targets. 2009 May; 10(5):432-41.
Score: 0.218
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Pe?a PV, Musselman CA, Kuo AJ, Gozani O, Kutateladze TG. NMR assignments and histone specificity of the ING2 PHD finger. Magn Reson Chem. 2009 Apr; 47(4):352-8.
Score: 0.217
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Champagne KS, Saksouk N, Pe?a PV, Johnson K, Ullah M, Yang XJ, C?t? J, Kutateladze TG. The crystal structure of the ING5 PHD finger in complex with an H3K4me3 histone peptide. Proteins. 2008 Sep; 72(4):1371-6.
Score: 0.208
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Pe?a PV, Hom RA, Hung T, Lin H, Kuo AJ, Wong RP, Subach OM, Champagne KS, Zhao R, Verkhusha VV, Li G, Gozani O, Kutateladze TG. Histone H3K4me3 binding is required for the DNA repair and apoptotic activities of ING1 tumor suppressor. J Mol Biol. 2008 Jul 04; 380(2):303-12.
Score: 0.203
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Pe?a PV, Davrazou F, Shi X, Walter KL, Verkhusha VV, Gozani O, Zhao R, Kutateladze TG. Molecular mechanism of histone H3K4me3 recognition by plant homeodomain of ING2. Nature. 2006 Jul 06; 442(7098):100-3.
Score: 0.178
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Zhang Y, Xie G, Lee JE, Zandian M, Sudarshan D, Estavoyer B, Benz C, Viita T, Asgaritarghi G, Lachance C, Messmer C, Simonetti L, Sinha VK, Lambert JP, Chen YW, Wang SP, Ivarsson Y, Affar EB, C?t? J, Ge K, Kutateladze TG. ASXLs binding to the PHD2/3 fingers of MLL4 provides a mechanism for the recruitment of BAP1 to active enhancers. Nat Commun. 2024 Jun 07; 15(1):4883.
Score: 0.155
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Yokoyama A, Niida H, Kutateladze TG, C?t? J. HBO1, a MYSTerious KAT and its links to cancer. Biochim Biophys Acta Gene Regul Mech. 2024 09; 1867(3):195045.
Score: 0.155
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Lauberth SM, Kutateladze TG, Black JC. Interpreting Combinatorial Epigenetic Modifications for Biological Meaning. J Mol Biol. 2024 04 01; 436(7):168501.
Score: 0.152
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Gaurav N, Kutateladze TG. Non-histone binding functions of PHD fingers. Trends Biochem Sci. 2023 07; 48(7):610-617.
Score: 0.143
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Ortiz G, Kutateladze TG, Fujimori DG. Chemical tools targeting readers of lysine methylation. Curr Opin Chem Biol. 2023 06; 74:102286.
Score: 0.143
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Klein BJ, Deshpande A, Cox KL, Xuan F, Zandian M, Barbosa K, Khanal S, Tong Q, Zhang Y, Zhang P, Sinha A, Bohlander SK, Shi X, Wen H, Poirier MG, Deshpande AJ, Kutateladze TG. The role of the PZP domain of AF10 in acute leukemia driven by AF10 translocations. Nat Commun. 2021 07 05; 12(1):4130.
Score: 0.127
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Klein BJ, Cox KL, Jang SM, Singh RK, C?t? J, Poirier MG, Kutateladze TG. Structural and biophysical characterization of the nucleosome-binding PZP domain. STAR Protoc. 2021 06 18; 2(2):100479.
Score: 0.125
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Yu Y, Tencer A, Xuan H, Kutateladze TG, Shi X. ZZEF1 is a Histone Reader and Transcriptional Coregulator of Kr?ppel-Like Factors. J Mol Biol. 2021 01 22; 433(2):166722.
Score: 0.121
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Tencer AH, Cox KL, Wright GM, Zhang Y, Petell CJ, Klein BJ, Strahl BD, Black JC, Poirier MG, Kutateladze TG. Molecular mechanism of the MORC4 ATPase activation. Nat Commun. 2020 10 29; 11(1):5466.
Score: 0.121
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Liu J, Xue Z, Vann KR, Shi X, Kutateladze TG. Protocol for Biochemical Analysis and Structure Determination of the ZZ Domain of the E3?Ubiquitin Ligase HERC2. STAR Protoc. 2020 12 18; 1(3):100155.
Score: 0.121
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Zhang Y, Guo Y, Gough SM, Zhang J, Vann KR, Li K, Cai L, Shi X, Aplan PD, Wang GG, Kutateladze TG. Mechanistic insights into chromatin targeting by leukemic NUP98-PHF23 fusion. Nat Commun. 2020 07 03; 11(1):3339.
Score: 0.118
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Mondal P, Sen S, Klein BJ, Tiwary N, Gadad SS, Kutateladze TG, Roy S, Das C. TCF19 Promotes Cell Proliferation through Binding to the Histone H3K4me3 Mark. Biochemistry. 2020 02 04; 59(4):389-399.
Score: 0.113
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Zhang Y, Kutateladze TG. Liquid-liquid phase separation is an intrinsic physicochemical property of chromatin. Nat Struct Mol Biol. 2019 12; 26(12):1085-1086.
Score: 0.113
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Klein BJ, Cox KL, Jang SM, C?t? J, Poirier MG, Kutateladze TG. Molecular Basis for the PZP Domain of BRPF1 Association with Chromatin. Structure. 2020 01 07; 28(1):105-110.e3.
Score: 0.113
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Manickavinayaham S, V?lez-Cruz R, Biswas AK, Bedford E, Klein BJ, Kutateladze TG, Liu B, Bedford MT, Johnson DG. E2F1 acetylation directs p300/CBP-mediated histone acetylation at DNA double-strand breaks to facilitate repair. Nat Commun. 2019 10 30; 10(1):4951.
Score: 0.113
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Zhang Y, Ahn J, Green KJ, Vann KR, Black J, Brooke CB, Kutateladze TG. MORC3 Is a Target of the Influenza A Viral Protein NS1. Structure. 2019 06 04; 27(6):1029-1033.e3.
Score: 0.109
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Zhang Y, Klein BJ, Cox KL, Bertulat B, Tencer AH, Holden MR, Wright GM, Black J, Cardoso MC, Poirier MG, Kutateladze TG. Mechanism for autoinhibition and activation of the MORC3 ATPase. Proc Natl Acad Sci U S A. 2019 03 26; 116(13):6111-6119.
Score: 0.108
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Zhang Y, Mi W, Xue Y, Shi X, Kutateladze TG. The ZZ domain as a new epigenetic reader and a degradation signal sensor. Crit Rev Biochem Mol Biol. 2019 02; 54(1):1-10.
Score: 0.107
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Mi W, Zhang Y, Lyu J, Wang X, Tong Q, Peng D, Xue Y, Tencer AH, Wen H, Li W, Kutateladze TG, Shi X. The ZZ-type zinc finger of ZZZ3 modulates the ATAC complex-mediated histone acetylation and gene activation. Nat Commun. 2018 09 14; 9(1):3759.
Score: 0.104
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Vann KR, Kutateladze TG. Architecture of PRC2 Holo Complexes. Trends Biochem Sci. 2018 07; 43(7):487-489.
Score: 0.102
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Mi W, Guan H, Lyu J, Zhao D, Xi Y, Jiang S, Andrews FH, Wang X, Gagea M, Wen H, Tora L, Dent SYR, Kutateladze TG, Li W, Li H, Shi X. YEATS2 links histone acetylation to tumorigenesis of non-small cell lung cancer. Nat Commun. 2017 10 20; 8(1):1088.
Score: 0.098
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Brown DA, Di Cerbo V, Feldmann A, Ahn J, Ito S, Blackledge NP, Nakayama M, McClellan M, Dimitrova E, Turberfield AH, Long HK, King HW, Kriaucionis S, Schermelleh L, Kutateladze TG, Koseki H, Klose RJ. The SET1 Complex Selects Actively Transcribed Target Genes via Multivalent Interaction with CpG Island Chromatin. Cell Rep. 2017 Sep 05; 20(10):2313-2327.
Score: 0.097
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Zhu L, Li Q, Wong SH, Huang M, Klein BJ, Shen J, Ikenouye L, Onishi M, Schneidawind D, Buechele C, Hansen L, Duque-Afonso J, Zhu F, Martin GM, Gozani O, Majeti R, Kutateladze TG, Cleary ML. ASH1L Links Histone H3 Lysine 36 Dimethylation to MLL Leukemia. Cancer Discov. 2016 07; 6(7):770-83.
Score: 0.089
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Gatchalian J, Gallardo CM, Shinsky SA, Ospina RR, Liendo AM, Krajewski K, Klein BJ, Andrews FH, Strahl BD, M van Wely KH, Kutateladze TG. Chromatin condensation and recruitment of PHD finger proteins to histone H3K4me3 are mutually exclusive. Nucleic Acids Res. 2016 07 27; 44(13):6102-12.
Score: 0.088
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Kutateladze TG, Kiessling LL. Focus on Epigenetics. ACS Chem Biol. 2016 Mar 18; 11(3):541-2.
Score: 0.088
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Klein BJ, Muthurajan UM, Lalonde ME, Gibson MD, Andrews FH, Hepler M, Machida S, Yan K, Kurumizaka H, Poirier MG, C?t? J, Luger K, Kutateladze TG. Bivalent interaction of the PZP domain of BRPF1 with the nucleosome impacts chromatin dynamics and acetylation. Nucleic Acids Res. 2016 Jan 08; 44(1):472-84.
Score: 0.086
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Shanle EK, Andrews FH, Meriesh H, McDaniel SL, Dronamraju R, DiFiore JV, Jha D, Wozniak GG, Bridgers JB, Kerschner JL, Krajewski K, Mart?n GM, Morrison AJ, Kutateladze TG, Strahl BD. Association of Taf14 with acetylated histone H3 directs gene transcription and the DNA damage response. Genes Dev. 2015 Sep 01; 29(17):1795-800.
Score: 0.084
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Das C, Roy S, Namjoshi S, Malarkey CS, Jones DN, Kutateladze TG, Churchill ME, Tyler JK. Binding of the histone chaperone ASF1 to the CBP bromodomain promotes histone acetylation. Proc Natl Acad Sci U S A. 2014 Mar 25; 111(12):E1072-81.
Score: 0.076
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Ali M, Hom RA, Blakeslee W, Ikenouye L, Kutateladze TG. Diverse functions of PHD fingers of the MLL/KMT2 subfamily. Biochim Biophys Acta. 2014 Feb; 1843(2):366-71.
Score: 0.075
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Lalonde ME, Avvakumov N, Glass KC, Joncas FH, Saksouk N, Holliday M, Paquet E, Yan K, Tong Q, Klein BJ, Tan S, Yang XJ, Kutateladze TG, C?t? J. Exchange of associated factors directs a switch in HBO1 acetyltransferase histone tail specificity. Genes Dev. 2013 Sep 15; 27(18):2009-24.
Score: 0.074
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Gatchalian J, F?tterer A, Rothbart SB, Tong Q, Rincon-Arano H, S?nchez de Diego A, Groudine M, Strahl BD, Mart?nez-A C, van Wely KH, Kutateladze TG. Dido3 PHD modulates cell differentiation and division. Cell Rep. 2013 Jul 11; 4(1):148-58.
Score: 0.073
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Oliver SS, Musselman CA, Srinivasan R, Svaren JP, Kutateladze TG, Denu JM. Multivalent recognition of histone tails by the PHD fingers of CHD5. Biochemistry. 2012 Aug 21; 51(33):6534-44.
Score: 0.068
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Yuan CC, Matthews AG, Jin Y, Chen CF, Chapman BA, Ohsumi TK, Glass KC, Kutateladze TG, Borowsky ML, Struhl K, Oettinger MA. Histone H3R2 symmetric dimethylation and histone H3K4 trimethylation are tightly correlated in eukaryotic genomes. Cell Rep. 2012 Feb 23; 1(2):83-90.
Score: 0.066
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Musselman CA, Ram?rez J, Sims JK, Mansfield RE, Oliver SS, Denu JM, Mackay JP, Wade PA, Hagman J, Kutateladze TG. Bivalent recognition of nucleosomes by the tandem PHD fingers of the CHD4 ATPase is required for CHD4-mediated repression. Proc Natl Acad Sci U S A. 2012 Jan 17; 109(3):787-92.
Score: 0.066
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Mansfield RE, Musselman CA, Kwan AH, Oliver SS, Garske AL, Davrazou F, Denu JM, Kutateladze TG, Mackay JP. Plant homeodomain (PHD) fingers of CHD4 are histone H3-binding modules with preference for unmodified H3K4 and methylated H3K9. J Biol Chem. 2011 Apr 01; 286(13):11779-91.
Score: 0.061
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Chang PY, Hom RA, Musselman CA, Zhu L, Kuo A, Gozani O, Kutateladze TG, Cleary ML. Binding of the MLL PHD3 finger to histone H3K4me3 is required for MLL-dependent gene transcription. J Mol Biol. 2010 Jul 09; 400(2):137-44.
Score: 0.058
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Hung T, Binda O, Champagne KS, Kuo AJ, Johnson K, Chang HY, Simon MD, Kutateladze TG, Gozani O. ING4 mediates crosstalk between histone H3 K4 trimethylation and H3 acetylation to attenuate cellular transformation. Mol Cell. 2009 Jan 30; 33(2):248-56.
Score: 0.054
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Saksouk N, Avvakumov N, Champagne KS, Hung T, Doyon Y, Cayrou C, Paquet E, Ullah M, Landry AJ, C?t? V, Yang XJ, Gozani O, Kutateladze TG, C?t? J. HBO1 HAT complexes target chromatin throughout gene coding regions via multiple PHD finger interactions with histone H3 tail. Mol Cell. 2009 Jan 30; 33(2):257-65.
Score: 0.054
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Matthews AG, Kuo AJ, Ram?n-Maiques S, Han S, Champagne KS, Ivanov D, Gallardo M, Carney D, Cheung P, Ciccone DN, Walter KL, Utz PJ, Shi Y, Kutateladze TG, Yang W, Gozani O, Oettinger MA. RAG2 PHD finger couples histone H3 lysine 4 trimethylation with V(D)J recombination. Nature. 2007 Dec 13; 450(7172):1106-10.
Score: 0.049
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Shi X, Kachirskaia I, Walter KL, Kuo JH, Lake A, Davrazou F, Chan SM, Martin DG, Fingerman IM, Briggs SD, Howe L, Utz PJ, Kutateladze TG, Lugovskoy AA, Bedford MT, Gozani O. Proteome-wide analysis in Saccharomyces cerevisiae identifies several PHD fingers as novel direct and selective binding modules of histone H3 methylated at either lysine 4 or lysine 36. J Biol Chem. 2007 Jan 26; 282(4):2450-5.
Score: 0.046
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Shi X, Hong T, Walter KL, Ewalt M, Michishita E, Hung T, Carney D, Pe?a P, Lan F, Kaadige MR, Lacoste N, Cayrou C, Davrazou F, Saha A, Cairns BR, Ayer DE, Kutateladze TG, Shi Y, C?t? J, Chua KF, Gozani O. ING2 PHD domain links histone H3 lysine 4 methylation to active gene repression. Nature. 2006 Jul 06; 442(7098):96-9.
Score: 0.044
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Chen Z, Zang J, Whetstine J, Hong X, Davrazou F, Kutateladze TG, Simpson M, Mao Q, Pan CH, Dai S, Hagman J, Hansen K, Shi Y, Zhang G. Structural insights into histone demethylation by JMJD2 family members. Cell. 2006 May 19; 125(4):691-702.
Score: 0.044
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Riching AS, Danis E, Zhao Y, Cao Y, Chi C, Bagchi RA, Klein BJ, Xu H, Kutateladze TG, McKinsey TA, Buttrick PM, Song K. Suppression of canonical TGF-? signaling enables GATA4 to interact with H3K27me3 demethylase JMJD3 to promote cardiomyogenesis. J Mol Cell Cardiol. 2021 04; 153:44-59.
Score: 0.031
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Bacon CW, Challa A, Hyder U, Shukla A, Borkar AN, Bayo J, Liu J, Wu SY, Chiang CM, Kutateladze TG, D'Orso I. KAP1 Is a Chromatin Reader that Couples Steps of RNA Polymerase II Transcription to Sustain Oncogenic Programs. Mol Cell. 2020 06 18; 78(6):1133-1151.e14.
Score: 0.029
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Gibson MD, Gatchalian J, Slater A, Kutateladze TG, Poirier MG. PHF1 Tudor and N-terminal domains synergistically target partially unwrapped nucleosomes to increase DNA accessibility. Nucleic Acids Res. 2017 04 20; 45(7):3767-3776.
Score: 0.024
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Alpatov R, Lesch BJ, Nakamoto-Kinoshita M, Blanco A, Chen S, St?tzer A, Armache KJ, Simon MD, Xu C, Ali M, Murn J, Prisic S, Kutateladze TG, Vakoc CR, Min J, Kingston RE, Fischle W, Warren ST, Page DC, Shi Y. A chromatin-dependent role of the fragile X mental retardation protein FMRP in the DNA damage response. Cell. 2014 May 08; 157(4):869-81.
Score: 0.019
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Avvakumov N, Lalonde ME, Saksouk N, Paquet E, Glass KC, Landry AJ, Doyon Y, Cayrou C, Robitaille GA, Richard DE, Yang XJ, Kutateladze TG, C?t? J. Conserved molecular interactions within the HBO1 acetyltransferase complexes regulate cell proliferation. Mol Cell Biol. 2012 Feb; 32(3):689-703.
Score: 0.016
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Garske AL, Oliver SS, Wagner EK, Musselman CA, LeRoy G, Garcia BA, Kutateladze TG, Denu JM. Combinatorial profiling of chromatin binding modules reveals multisite discrimination. Nat Chem Biol. 2010 Apr; 6(4):283-90.
Score: 0.014
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Connection Strength
The connection strength for concepts is the sum of the scores for each matching publication.
Publication scores are based on many factors, including how long ago they were written and whether the person is a first or senior author.
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