 Metagenomics
"Metagenomics" is a descriptor in the National Library of Medicine's controlled vocabulary thesaurus,
MeSH (Medical Subject Headings). Descriptors are arranged in a hierarchical structure,
which enables searching at various levels of specificity.
The genomic analysis of assemblages of organisms.
| Descriptor ID |
D056186
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| MeSH Number(s) |
H01.158.273.343.350.261
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| Concept/Terms |
Metagenomics- Metagenomics
- Metagenomic
- Environmental Genomics
- Environmental Genomic
- Genomic, Environmental
- Genomics, Environmental
- Population Genomics
- Genomic, Population
- Genomics, Population
- Population Genomic
- Community Genomics
- Community Genomic
- Genomic, Community
- Genomics, Community
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Below are MeSH descriptors whose meaning is more general than "Metagenomics".
Below are MeSH descriptors whose meaning is more specific than "Metagenomics".
This graph shows the total number of publications written about "Metagenomics" by people in this website by year, and whether "Metagenomics" was a major or minor topic of these publications.
To see the data from this visualization as text, click here.
| Year | Major Topic | Minor Topic | Total |
|---|
| 2010 | 2 | 1 | 3 | | 2011 | 5 | 2 | 7 | | 2012 | 3 | 1 | 4 | | 2013 | 2 | 1 | 3 | | 2014 | 4 | 3 | 7 | | 2015 | 3 | 3 | 6 | | 2016 | 0 | 5 | 5 | | 2017 | 4 | 3 | 7 | | 2018 | 0 | 2 | 2 | | 2019 | 9 | 8 | 17 | | 2020 | 2 | 4 | 6 | | 2021 | 4 | 8 | 12 | | 2022 | 0 | 3 | 3 | | 2023 | 0 | 5 | 5 |
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Below are the most recent publications written about "Metagenomics" by people in Profiles.
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Arehart CH, Sterrett JD, Garris RL, Quispe-Pilco RE, Gignoux CR, Evans LM, Stanislawski MA. Poly-omic risk scores predict inflammatory bowel disease diagnosis. mSystems. 2024 Jan 23; 9(1):e0067723.
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Park SY, Chang EJ, Ledeboer N, Messacar K, Lindner MS, Venkatasubrahmanyam S, Wilber JC, Vaughn ML, Bercovici S, Perkins BA, Nolte FS. Plasma Microbial Cell-Free DNA Sequencing from over 15,000 Patients Identified a Broad Spectrum of Pathogens. J Clin Microbiol. 2023 08 23; 61(8):e0185522.
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Mick E, Tsitsiklis A, Kamm J, Kalantar KL, Caldera S, Lyden A, Tan M, Detweiler AM, Neff N, Osborne CM, Williamson KM, Soesanto V, Leroue M, Maddux AB, Sim?es EA, Carpenter TC, Wagner BD, DeRisi JL, Ambroggio L, Mourani PM, Langelier CR. Integrated host/microbe metagenomics enables accurate lower respiratory tract infection diagnosis in critically ill children. J Clin Invest. 2023 04 03; 133(7).
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Grundy BS, Parikh H, Jacob S, Banura P, Moore CC, Liu J, Houpt ER. Pathogen Detection Using Metagenomic Next-Generation Sequencing of Plasma Samples from Patients with Sepsis in Uganda. Microbiol Spectr. 2023 02 14; 11(1):e0431222.
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Mangalea MR, Keift K, Duerkop BA, Anantharaman K. Assembly and Annotation of Viral Metagenomes from Short-Read Sequencing Data. Methods Mol Biol. 2023; 2649:317-337.
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Zbinden ZD, Douglas MR, Chafin TK, Douglas ME. Riverscape community genomics: A comparative analytical approach to identify common drivers of spatial structure. Mol Ecol. 2023 12; 32(24):6743-6765.
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Niles DT, Lee RA, Lamb GS, Dhaheri FA, Boguniewicz J. Plasma cell-free metagenomic next generation sequencing in the clinical setting for the diagnosis of infectious diseases: a systematic review and meta-analysis. Diagn Microbiol Infect Dis. 2023 Jan; 105(1):115838.
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Tsitsiklis A, Osborne CM, Kamm J, Williamson K, Kalantar K, Dudas G, Caldera S, Lyden A, Tan M, Neff N, Soesanto V, Harris JK, Ambroggio L, Maddux AB, Carpenter TC, Reeder RW, Locandro C, Sim?es EAF, Leroue MK, Hall MW, Zuppa AF, Carcillo J, Meert KL, Sapru A, Pollack MM, McQuillen PS, Notterman DA, Dean JM, Zinter MS, Wagner BD, DeRisi JL, Mourani PM, Langelier CR. Lower respiratory tract infections in children requiring mechanical ventilation: a multicentre prospective surveillance study incorporating airway metagenomics. Lancet Microbe. 2022 04; 3(4):e284-e293.
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Dragone NB, Henley JB, Holland-Moritz H, Diaz M, Hogg ID, Lyons WB, Wall DH, Adams BJ, Fierer N. Elevational Constraints on the Composition and Genomic Attributes of Microbial Communities in Antarctic Soils. mSystems. 2022 02 22; 7(1):e0133021.
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Graff K, Dominguez SR, Messacar K. Metagenomic Next-Generation Sequencing for Diagnosis of Pediatric Meningitis and Encephalitis: A Review. J Pediatric Infect Dis Soc. 2021 Dec 24; 10(Supplement_4):S78-S87.
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