Colorado PROFILES, The Colorado Clinical and Translational Sciences Institute (CCTSI)
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Sudipta Panja

TitleResearch Associate
InstitutionUniversity of Colorado Denver - Anschutz Medical Campus
DepartmentSOM-OP General Operations
Phone303/724-3577

    Collapse Bibliographic 
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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    1. Upadhyay V, Panja S, Krishnamachari Y, Mittal SN, Xi H, Xu W, Song J, Hu G, Su Y, Mallela KMG. Effect of silicone oil on the structure, stability, and aggregation of a therapeutic antibody. J Pharm Sci. 2025 May 23; 114(8):103848. PMID: 40414350.
      View in: PubMed
    2. Panja S, Kapoor E, Siddhanta K, Jogdeo CM, Sil D, Khan RI, Kumari N, Ding L, Gendelman HE, Singh AB, Oupick? D. Bioactive polymers as stimulus-responsive anti-metastatic combination agents to treat pancreatic cancer. Biomaterials. 2025 Sep; 320:123255. PMID: 40107179.
      View in: PubMed
    3. Panja S, Rankenberg J, Michel C, Cooksley G, Glomb MA, Nagaraj RH. Proximal cysteine residues in proteins promote Ne-carboxyalkylation of lysine residues by a-dicarbonyl compounds. J Biol Chem. 2025 Apr; 301(4):108377. PMID: 40049410.
      View in: PubMed
    4. Patel M, Panja S, Zaman LA, Yeapuri P, Bhattarai S, Gorantla S, Chang L, Heredia A, Walczak P, Hanson B, Cohen SM, Kevadiya BD, Gendelman HE. CCR5-ligand decorated rilpivirine lipid-based nanoparticles for sustained antiretroviral responses. Nat Commun. 2025 Jan 08; 16(1):513. PMID: 39779664.
      View in: PubMed
    5. Upadhyay V, Ray S, Panja S, Saviola AJ, Maluf NK, Mallela KMG. Biophysical characterization of the dystrophin C-terminal domain: Dystrophin interacts differentially with dystrobrevin isoforms. J Biol Chem. 2024 12; 300(12):108002. PMID: 39551137.
      View in: PubMed
    6. Jogdeo CM, Panja S, Kumari N, Tang W, Kapoor E, Siddhanta K, Das A, Boesen EI, Foster KW, Oupick? D. Inulin-based nanoparticles for targeted siRNA delivery in acute kidney injury. J Control Release. 2024 Dec; 376:577-592. PMID: 39419450.
      View in: PubMed
    7. Panja S, Nahomi RB, Rankenberg J, Michel CR, Nagaraj RH. Thiol-Mediated Enhancement of Ne-Acetyllysine Formation in Lens Proteins. ACS Chem Biol. 2024 07 19; 19(7):1495-1505. PMID: 38904252.
      View in: PubMed
    8. Jogdeo CM, Siddhanta K, Das A, Ding L, Panja S, Kumari N, Oupick? D. Beyond Lipids: Exploring Advances in Polymeric Gene Delivery in the Lipid Nanoparticles Era. Adv Mater. 2024 Aug; 36(31):e2404608. PMID: 38842816.
      View in: PubMed
    9. Gendelman HE, Patel M, Panja S, Zaman LA, Yeapuri P, Bhattarai S, Gorantla S, Chang L, Heredia A, Walczak P, Cohen S, Kevadiya B. CCR5 Decorated Rilpivirine Lipid Nanoparticles Build Myeloid Drug Depots Which Sustains Antiretroviral Activities. Res Sq. 2024 Jun 03. PMID: 38883780.
      View in: PubMed
    10. Nayan MU, Panja S, Sultana A, Zaman LA, Vora LK, Sillman B, Gendelman HE, Edagwa B. Polymer Delivery Systems for Long-Acting Antiretroviral Drugs. Pharmaceutics. 2024 Jan 28; 16(2). PMID: 38399244.
      View in: PubMed
    11. Ali MU, Chaudhary BN, Panja S, Gendelman HE. Theranostic Diagnostics. Results Probl Cell Differ. 2024; 73:551-578. PMID: 39242393.
      View in: PubMed
    12. Panja S, Nam MH, Gaikwad H, Rankenberg J, Nagaraj RH. Topical ocular application of aggrelyte-2A reduces lens stiffness in mice. Front Ophthalmol (Lausanne). 2023; 3:1274825. PMID: 38983035.
      View in: PubMed
    13. Upadhyay V, Panja S, Lucas A, Patrick C, Mallela KMG. Biophysical evolution of the receptor-binding domains of SARS-CoVs. Biophys J. 2023 12 05; 122(23):4489-4502. PMID: 37897042.
      View in: PubMed
    14. Panja S, Nahomi RB, Rankenberg J, Michel CR, Gaikwad H, Nam MH, Nagaraj RH. Aggrelyte-2 promotes protein solubility and decreases lens stiffness through lysine acetylation and disulfide reduction: Implications for treating presbyopia. Aging Cell. 2023 04; 22(4):e13797. PMID: 36823285.
      View in: PubMed
    15. Panja S, Gaikwad H, Rankenberg J, Nam MH, Nagaraj RH. Promotion of Protein Solubility and Reduction in Stiffness in Human Lenses by Aggrelyte-1: Implications for Reversing Presbyopia. Int J Mol Sci. 2023 Jan 22; 24(3). PMID: 36768517.
      View in: PubMed
    16. Jogdeo CM, Panja S, Kanvinde S, Kapoor E, Siddhanta K, Oupick? D. Advances in Lipid-Based Codelivery Systems for Cancer and Inflammatory Diseases. Adv Healthc Mater. 2023 03; 12(7):e2202400. PMID: 36453542.
      View in: PubMed
    17. Panja S, Siegel D, Camandola S, de Cabo R, Ross D, Mallela KMG. FAD-deficient P187S mutation of NAD(P)H:quinone oxidoreductase 1 (NQO1*2) binds and accelerates ?-amyloid aggregation. Biosci Rep. 2022 11 30; 42(11). PMID: 36281795.
      View in: PubMed
    18. Khan R, Panja S, Ding L, Tang S, Tang W, Kapoor E, Bennett RG, Oupick? D. Polymeric Chloroquine as an Effective Antimigration Agent in the Treatment of Pancreatic Cancer. Mol Pharm. 2022 12 05; 19(12):4631-4643. PMID: 36346968.
      View in: PubMed
    19. Kumari N, Siddhanta K, Panja S, Joshi V, Jogdeo C, Kapoor E, Khan R, Kollala SS, Kumar B, Sil D, Singh AB, Murry DJ, Oupick? D. Oral Delivery of Nucleic Acid Therapies for Local and Systemic Action. Pharm Res. 2023 Jan; 40(1):107-122. PMID: 36271204.
      View in: PubMed
    20. Tang W, Panja S, Jogdeo CM, Tang S, Ding L, Yu A, Foster KW, Dsouza DL, Chhonker YS, Jensen-Smith H, Jang HS, Boesen EI, Murry DJ, Padanilam B, Oupick? D. Modified chitosan for effective renal delivery of siRNA to treat acute kidney injury. Biomaterials. 2022 06; 285:121562. PMID: 35552115.
      View in: PubMed
    21. Sil D, Panja S, Jogdeo CM, Kumar R, Yu A, Holbert CE, Ding L, Foley JR, Stewart TM, Casero RA, Oupick? D. Self-Assembled Alkylated Polyamine Analogs as Supramolecular Anticancer Agents. Molecules. 2022 Apr 10; 27(8). PMID: 35458639.
      View in: PubMed
    22. Tang W, Panja S, Jogdeo CM, Tang S, Yu A, Oupick? D. Study of Renal Accumulation of Targeted Polycations in Acute Kidney Injury. Biomacromolecules. 2022 05 09; 23(5):2064-2074. PMID: 35394757.
      View in: PubMed
    23. Yu A, Tang S, Ding L, Foley J, Tang W, Jia H, Panja S, Holbert CE, Hang Y, Stewart TM, Smith LM, Sil D, Casero RA, Oupick? D. Hyaluronate-coated perfluoroalkyl polyamine prodrugs as bioactive siRNA delivery systems for the treatment of peritoneal cancers. Biomater Adv. 2022 May; 136. PMID: 35813988.
      View in: PubMed
    24. Yu A, Tang S, Ding L, Foley J, Tang W, Jia H, Panja S, Holbert CE, Hang Y, Stewart TM, Smith LM, Sil D, Casero RA, Oupick? D. Hyaluronate-coated perfluoroalkyl polyamine prodrugs as bioactive siRNA delivery systems for the treatment of peritoneal cancers. Biomater Adv. 2022 May; 136:212755. PMID: 35929290.
      View in: PubMed
    25. Panja S, Siehr A, Sahoo A, Siegel RA, Shen W. Biodegradable Elastomers Enabling Thermoprocessing Below 100 ?C. Biomacromolecules. 2022 01 10; 23(1):163-173. PMID: 34898190.
      View in: PubMed
    26. Upadhyay V, Lucas A, Panja S, Miyauchi R, Mallela KMG. Receptor binding, immune escape, and protein stability direct the natural selection of SARS-CoV-2 variants. J Biol Chem. 2021 10; 297(4):101208. PMID: 34543625.
      View in: PubMed
    27. Alzobaidi S, Wu P, Da C, Zhang X, Hackbarth J, Angeles T, Rabat-Torki NJ, MacAuliffe S, Panja S, Johnston KP. Effect of surface chemistry of silica nanoparticles on contact angle of oil on calcite surfaces in concentrated brine with divalent ions. J Colloid Interface Sci. 2021 Jan 01; 581(Pt B):656-668. PMID: 32814189.
      View in: PubMed
    28. Panja S, Hanson S, Wang C. EDTA-Inspired Polydentate Hydrogels with Exceptionally High Heavy Metal Adsorption Capacity as Reusable Adsorbents for Wastewater Purification. ACS Appl Mater Interfaces. 2020 Jun 03; 12(22):25276-25285. PMID: 32383581.
      View in: PubMed
    29. Upadhyay V, Bandi S, Panja S, Saba L, Mallela KMG. Tissue-Specificity of Dystrophin-Actin Interactions: Isoform-Specific Thermodynamic Stability and Actin-Binding Function of Tandem Calponin-Homology Domains. ACS Omega. 2020 Feb 11; 5(5):2159-2168. PMID: 32064376.
      View in: PubMed
    30. Panja S, Bharti R, Dey G, Lynd NA, Chattopadhyay S. Coordination-Assisted Self-Assembled Polypeptide Nanogels to Selectively Combat Bacterial Infection. ACS Appl Mater Interfaces. 2019 Sep 18; 11(37):33599-33611. PMID: 31429277.
      View in: PubMed
    31. Panja S, Khatua DK, Halder M. Effect of casein on pure lecithin liposome: Mixed biomacromolecular system for providing superior stabilization to hydrophobic molecules. Colloids Surf B Biointerfaces. 2019 Aug 01; 180:298-305. PMID: 31071569.
      View in: PubMed
    32. Panja S, Khatua DK, Halder M. Investigations on the Effect of Fatty Acid Additives on Casein Micelles: Role of Ethylenic Unsaturation on the Interaction and Structural Diversity. ACS Omega. 2018 Jan 31; 3(1):821-830. PMID: 31457932.
      View in: PubMed
    33. Panja S, Khatua DK, Halder M. Simultaneous Binding of Folic Acid and Methotrexate to Human Serum Albumin: Insights into the Structural Changes of Protein and the Location and Competitive Displacement of Drugs. ACS Omega. 2018 Jan 31; 3(1):246-253. PMID: 30023775.
      View in: PubMed
    34. Panja S, Behera S, Kundu SC, Halder M. Optical Spectroscopic and Morphological Characterizations of Curcuminized Silk Biomaterials: A Perspective from Drug Stabilization. ACS Omega. 2017 Oct 31; 2(10):6755-6767. PMID: 30023531.
      View in: PubMed
    35. Das I, Panja S, Halder M. Modulation and Salt-Induced Reverse Modulation of the Excited-State Proton-Transfer Process of Lysozymized Pyranine: The Contrasting Scenario of the Ground-State Acid-Base Equilibrium of the Photoacid. J Phys Chem B. 2016 07 28; 120(29):7076-87. PMID: 27355857.
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    36. Panja S, Halder M. Exploration of electrostatic interaction in the hydrophobic pocket of lysozyme: Importance of ligand-induced perturbation of the secondary structure on the mode of binding of exogenous ligand and possible consequences. J Photochem Photobiol B. 2016 Aug; 161:253-65. PMID: 27285817.
      View in: PubMed
    37. Panja S, Maji S, Maiti TK, Chattopadhyay S. A Smart Magnetically Active Nanovehicle for on-Demand Targeted Drug Delivery: Where van der Waals Force Balances the Magnetic Interaction. ACS Appl Mater Interfaces. 2015 Nov 04; 7(43):24229-41. PMID: 26458134.
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    38. Datta S, Panja S, Mitra P, Halder M. Distilbene derivative as a new environment-sensitive bifunctional ligand for the possible induction of serum protein aggregation: a spectroscopic investigation and potential consequences. Langmuir. 2015 Oct 06; 31(39):10781-90. PMID: 26340589.
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    39. Payyappilly SS, Panja S, Mandal P, Dhara S, Chattopadhyay S. Organic solvent-free low temperature method of preparation for self assembled amphiphilic poly(?-caprolactone)-poly(ethylene glycol) block copolymer based nanocarriers for protein delivery. Colloids Surf B Biointerfaces. 2015 Nov 01; 135:510-517. PMID: 26291587.
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    40. Datta S, Panja S, Halder M. Detailed scenario of the acid-base behavior of prototropic molecules in the subdomain-IIA pocket of serum albumin: results and prospects in drug delivery. J Phys Chem B. 2014 Oct 23; 118(42):12153-67. PMID: 25243734.
      View in: PubMed
    41. Panja S, Saha B, Ghosh SK, Chattopadhyay S. synthesis of novel four armed PE-PCL grafted superparamagnetic and biocompatible nanoparticles. Langmuir. 2013 Oct 08; 29(40):12530-40. PMID: 24041315.
      View in: PubMed
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