Tom Altman
Title | Professor |
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Institution | University of Colorado Denver - Denver Campus |
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Department | CEDC-Computer SC & Engineering |
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Phone | 303/315-1401 |
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Bibliographic
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Edgar RC, Taylor J, Lin V, Altman T, Barbera P, Meleshko D, Lohr D, Novakovsky G, Buchfink B, Al-Shayeb B, Banfield JF, de la Peña M, Korobeynikov A, Chikhi R, Babaian A. Petabase-scale sequence alignment catalyses viral discovery. Nature. 2022 02; 602(7895):142-147. PMID: 35082445.
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Yin X, Altman T, Rutherford E, West KA, Wu Y, Choi J, Beck PL, Kaplan GG, Dabbagh K, DeSantis TZ, Iwai S. A Comparative Evaluation of Tools to Predict Metabolite Profiles From Microbiome Sequencing Data. Front Microbiol. 2020; 11:595910. PMID: 33343536.
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Rulifson G, Bielefeldt AR. Evolution of Students' Varied Conceptualizations About Socially Responsible Engineering: A Four Year Longitudinal Study. Sci Eng Ethics. 2019 06; 25(3):939-974. PMID: 22102576.
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Rulifson G, Bielefeldt AR. Evolution of Students' Varied Conceptualizations About Socially Responsible Engineering: A Four Year Longitudinal Study. Sci Eng Ethics. 2019 06; 25(3):939-974. PMID: 25048541.
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Rulifson G, Bielefeldt AR. Evolution of Students' Varied Conceptualizations About Socially Responsible Engineering: A Four Year Longitudinal Study. Sci Eng Ethics. 2019 06; 25(3):939-974. PMID: 24285306.
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Rulifson G, Bielefeldt AR. Evolution of Students' Varied Conceptualizations About Socially Responsible Engineering: A Four Year Longitudinal Study. Sci Eng Ethics. 2019 06; 25(3):939-974. PMID: 19850718.
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Hahn AS, Altman T, Konwar KM, Hanson NW, Kim D, Relman DA, Dill DL, Hallam SJ. A geographically-diverse collection of 418 human gut microbiome pathway genome databases. Sci Data. 2017 04 11; 4:170035. PMID: 28398290.
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Shearer AG, Altman T, Rhee CD. Finding sequences for over 270 orphan enzymes. PLoS One. 2014; 9(5):e97250. PMID: 24826896.
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Caspi R, Altman T, Billington R, Dreher K, Foerster H, Fulcher CA, Holland TA, Keseler IM, Kothari A, Kubo A, Krummenacker M, Latendresse M, Mueller LA, Ong Q, Paley S, Subhraveti P, Weaver DS, Weerasinghe D, Zhang P, Karp PD. The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of Pathway/Genome Databases. Nucleic Acids Res. 2014 Jan; 42(Database issue):D459-71. PMID: 24225315.
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Altman T, Travers M, Kothari A, Caspi R, Karp PD. A systematic comparison of the MetaCyc and KEGG pathway databases. BMC Bioinformatics. 2013 Mar 27; 14:112. PMID: 23530693.
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Karp PD, Paley S, Altman T. Data mining in the MetaCyc family of pathway databases. Methods Mol Biol. 2013; 939:183-200. PMID: 23192547.
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Keseler IM, Collado-Vides J, Santos-Zavaleta A, Peralta-Gil M, Gama-Castro S, Muñiz-Rascado L, Bonavides-Martinez C, Paley S, Krummenacker M, Altman T, Kaipa P, Spaulding A, Pacheco J, Latendresse M, Fulcher C, Sarker M, Shearer AG, Mackie A, Paulsen I, Gunsalus RP, Karp PD. EcoCyc: a comprehensive database of Escherichia coli biology. Nucleic Acids Res. 2011 Jan; 39(Database issue):D583-90. PMID: 21097882.
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Le T, Altman T, Gardiner K. HIGEDA: a hierarchical gene-set genetics based algorithm for finding subtle motifs in biological sequences. Bioinformatics. 2010 Feb 01; 26(3):302-9. PMID: 19996163.
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Karp PD, Paley SM, Krummenacker M, Latendresse M, Dale JM, Lee TJ, Kaipa P, Gilham F, Spaulding A, Popescu L, Altman T, Paulsen I, Keseler IM, Caspi R. Pathway Tools version 13.0: integrated software for pathway/genome informatics and systems biology. Brief Bioinform. 2010 Jan; 11(1):40-79. PMID: 19955237.
This graph shows the total number of publications by year, by first, middle/unknown, or last author.
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Year | Publications |
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2009 | 2 | 2010 | 1 | 2013 | 3 | 2014 | 1 | 2017 | 1 | 2018 | 4 | 2020 | 1 | 2022 | 1 |
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