Colorado PROFILES, The Colorado Clinical and Translational Sciences Institute (CCTSI)
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Natalie Rose Davidson

TitleAssistant Professor
InstitutionUniversity of Colorado Denver - Anschutz Medical Campus
DepartmentSOM-OB/GYN RS GENERAL OPS

    Collapse Research 
    Collapse research activities and funding
    R00HG012945     (DAVIDSON, NATALIE ROSE)May 15, 2023 - Jul 31, 2027
    NIH
    Domain adaptation approaches to unify established and emerging sequencing technologies
    Role: Principal Investigator
    K99HG012945     (DAVIDSON, NATALIE ROSE)May 15, 2023 - Apr 30, 2025
    NIH
    Domain adaptation approaches to unify established and emerging sequencing technologies
    Role: Principal Investigator

    Collapse Bibliographic 
    Collapse selected publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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    1. Lawson-Michod KA, Marks JR, Collin LJ, Nix DA, Davidson NR, Huff CD, Yu Y, Atkinson A, Johnson CE, Salas LA, Peres LC, Greene CS, Schildkraut JM, Doherty JA. Genomic Characterization of High-Grade Serous Ovarian Carcinoma Reveals Distinct Somatic Features in Black Individuals. Cancer Res. 2025 May 02; 85(9):1725-1737. PMID: 40063699.
      View in: PubMed
    2. Ivich A, Davidson NR, Grieshober L, Li W, Hicks SC, Doherty JA, Greene CS. Missing cell types in single-cell references impact deconvolution of bulk data but are detectable. Genome Biol. 2025 Apr 07; 26(1):86. PMID: 40197327.
      View in: PubMed
    3. Davidson NR, Zhang F, Greene CS. BuDDI: Bulk Deconvolution with Domain Invariance to predict cell-type-specific perturbations from bulk. PLoS Comput Biol. 2025 Jan; 21(1):e1012742. PMID: 39823522.
      View in: PubMed
    4. Lin S, Nguyen LL, McMellen A, Leibowitz MS, Davidson N, Spinosa D, Bitler BG. Leveraging Multi-omics to Disentangle the Complexity of Ovarian Cancer. Mol Diagn Ther. 2025 Mar; 29(2):145-151. PMID: 39557776.
      View in: PubMed
    5. Davidson NR, Barnard ME, Hippen AA, Campbell A, Johnson CE, Way GP, Dalley BK, Berchuck A, Salas LA, Peres LC, Marks JR, Schildkraut JM, Greene CS, Doherty JA. Molecular Subtypes of High-Grade Serous Ovarian Cancer across Racial Groups and Gene Expression Platforms. Cancer Epidemiol Biomarkers Prev. 2024 Aug 01; 33(8):1114-1125. PMID: 38780898.
      View in: PubMed
    6. Davidson NR, Greene CS. Analysis of science journalism reveals gender and regional disparities in coverage. Elife. 2024 May 28; 12. PMID: 38804191.
      View in: PubMed
    7. Davidson NR, Zhang F, Greene CS. BuDDI: BulkDeconvolution withDomainInvariance to predict cell-type-specific perturbations from bulk. bioRxiv. 2024 Apr 04. PMID: 37503097.
      View in: PubMed
    8. Davidson NR, Barnard ME, Hippen AA, Campbell A, Johnson CE, Way GP, Dalley BK, Berchuck A, Salas LA, Peres LC, Marks JR, Schildkraut JM, Greene CS, Doherty JA. Molecular subtypes of high-grade serous ovarian cancer across racial groups and gene expression platforms. bioRxiv. 2023 Dec 02. PMID: 37961178.
      View in: PubMed
    9. Calabrese C, Davidson NR, Demircioglu D, Fonseca NA, He Y, Kahles A, Lehmann KV, Liu F, Shiraishi Y, Soulette CM, Urban L, Greger L, Li S, Liu D, Perry MD, Xiang Q, Zhang F, Zhang J, Bailey P, Erkek S, Hoadley KA, Hou Y, Huska MR, Kilpinen H, Korbel JO, Marin MG, Markowski J, Nandi T, Pan-Hammarstr?m Q, Pedamallu CS, Siebert R, Stark SG, Su H, Tan P, Waszak SM, Yung C, Zhu S, Awadalla P, Creighton CJ, Meyerson M, Ouellette BFF, Wu K, Yang H, Brazma A, Brooks AN, G?ke J, R?tsch G, Schwarz RF, Stegle O, Zhang Z. Author Correction: Genomic basis for RNA alterations in cancer. Nature. 2023 Feb; 614(7948):E37. PMID: 36697831.
      View in: PubMed
    10. Salloum D, Singh K, Davidson NR, Cao L, Kuo D, Sanghvi VR, Jiang M, Lafoz MT, Viale A, Ratsch G, Wendel HG. A Rapid Translational Immune Response Program in CD8 Memory T Lymphocytes. J Immunol. 2022 09 15; 209(6):1189-1199. PMID: 36002234.
      View in: PubMed
    11. Simmler P, Cortijo C, Koch LM, Galliker P, Angori S, Bolck HA, Mueller C, Vukolic A, Mirtschink P, Christinat Y, Davidson NR, Lehmann KV, Pellegrini G, Pauli C, Lenggenhager D, Guccini I, Ringel T, Hirt C, Marquart KF, Schaefer M, R?tsch G, Peter M, Moch H, Stoffel M, Schwank G. SF3B1 facilitates HIF1-signaling and promotes malignancy in pancreatic cancer. Cell Rep. 2022 08 23; 40(8):111266. PMID: 36001976.
      View in: PubMed
    12. Hippen AA, Davidson NR, Greene CS. Computational audits combat disparities in recognition. Nat Hum Behav. 2022 04; 6(4):473-474. PMID: 35039653.
      View in: PubMed
    13. Calabrese C, Davidson NR, Demircioglu D, Fonseca NA, He Y, Kahles A, Lehmann KV, Liu F, Shiraishi Y, Soulette CM, Urban L, Greger L, Li S, Liu D, Perry MD, Xiang Q, Zhang F, Zhang J, Bailey P, Erkek S, Hoadley KA, Hou Y, Huska MR, Kilpinen H, Korbel JO, Marin MG, Markowski J, Nandi T, Pan-Hammarstr?m Q, Pedamallu CS, Siebert R, Stark SG, Su H, Tan P, Waszak SM, Yung C, Zhu S, Awadalla P, Creighton CJ, Meyerson M, Ouellette BFF, Wu K, Yang H, Brazma A, Brooks AN, G?ke J, R?tsch G, Schwarz RF, Stegle O, Zhang Z. Genomic basis for RNA alterations in cancer. Nature. 2020 02; 578(7793):129-136. PMID: 32025019.
      View in: PubMed
    14. Krishnamoorthy GP, Davidson NR, Leach SD, Zhao Z, Lowe SW, Lee G, Landa I, Nagarajah J, Saqcena M, Singh K, Wendel HG, Dogan S, Tamarapu PP, Blenis J, Ghossein RA, Knauf JA, R?tsch G, Fagin JA. EIF1AX and RAS Mutations Cooperate to Drive Thyroid Tumorigenesis through ATF4 and c-MYC. Cancer Discov. 2019 02; 9(2):264-281. PMID: 30305285.
      View in: PubMed
    15. Davidson NR, Godfrey KR, Alquaddoomi F, Nola D, DiStefano JJ. Corrigendum to "DISTING: A web application for fast algorithmic computation of alternative indistinguishable linear compartmental models" [Computer Methods and Programs in Biomedicine 143 (2017) 129-135]. Comput Methods Programs Biomed. 2017 07; 146:25. PMID: 28688486.
      View in: PubMed
    16. Davidson NR, Godfrey KR, Alquaddoomi F, Nola D, DiStefano JJ. DISTING: A web application for fast algorithmic computation of alternative indistinguishable linear compartmental models. Comput Methods Programs Biomed. 2017 May; 143:129-135. PMID: 28391810.
      View in: PubMed
    17. Waldman YY, Biddanda A, Davidson NR, Billing-Ross P, Dubrovsky M, Campbell CL, Oddoux C, Friedman E, Atzmon G, Halperin E, Ostrer H, Keinan A. The Genetics of Bene Israel from India Reveals Both Substantial Jewish and Indian Ancestry. PLoS One. 2016; 11(3):e0152056. PMID: 27010569.
      View in: PubMed
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