Colorado PROFILES, The Colorado Clinical and Translational Sciences Institute (CCTSI)
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Last Name
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Fathi Karouia

TitleResearch Associate
InstitutionUniversity of Colorado Boulder
DepartmentAero-Bioserve Space Techs

    Collapse Bibliographic 
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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    1. Salido RA, Zhao HN, McDonald D, Mannochio-Russo H, Zuffa S, Oles RE, Aron AT, El Abiead Y, Farmer S, Gonz?lez A, Martino C, Mohanty I, Parker CW, Patel L, Portal Gomes PW, Schmid R, Schwartz T, Zhu J, Barratt MR, Rubins KH, Chu H, Karouia F, Venkateswaran K, Dorrestein PC, Knight R. The International Space Station has a unique and extreme microbial and chemical environment driven by use patterns. Cell. 2025 Apr 03; 188(7):2022-2041.e23. PMID: 40020666.
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    2. Mason CE, Green J, Adamopoulos KI, Afshin EE, Baechle JJ, Basner M, Bailey SM, Bielski L, Borg J, Borg J, Broddrick JT, Burke M, Caicedo A, Casta?eda V, Chatterjee S, Chin CR, Church G, Costes SV, De Vlaminck I, Desai RI, Dhir R, Diaz JE, Etlin SM, Feinstein Z, Furman D, Garcia-Medina JS, Garrett-Bakelman F, Giacomello S, Gupta A, Hassanin A, Houerbi N, Irby I, Javorsky E, Jirak P, Jones CW, Kamal KY, Kangas BD, Karouia F, Kim J, Kim JH, Kleinman AS, Lam T, Lawler JM, Lee JA, Limoli CL, Lucaci A, MacKay M, McDonald JT, Melnick AM, Meydan C, Mieczkowski J, Muratani M, Najjar D, Othman MA, Overbey EG, Paar V, Park J, Paul AM, Perdyan A, Proszynski J, Reynolds RJ, Ronca AE, Rubins K, Ryon KA, Sanders LM, Glowe PS, Shevde Y, Schmidt MA, Scott RT, Shirah B, Sienkiewicz K, Sierra MA, Siew K, Theriot CA, Tierney BT, Venkateswaran K, Hirschberg JW, Walsh SB, Walter C, Winer DA, Yu M, Zea L, Mateus J, Beheshti A. A second space age spanning omics, platforms and medicine across orbits. Nature. 2024 Aug; 632(8027):995-1008. PMID: 38862027.
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    3. Siew K, Nestler KA, Nelson C, D'Ambrosio V, Zhong C, Li Z, Grillo A, Wan ER, Patel V, Overbey E, Kim J, Yun S, Vaughan MB, Cheshire C, Cubitt L, Broni-Tabi J, Al-Jaber MY, Boyko V, Meydan C, Barker P, Arif S, Afsari F, Allen N, Al-Maadheed M, Altinok S, Bah N, Border S, Brown AL, Burling K, Cheng-Campbell M, Col?n LM, Degoricija L, Figg N, Finch R, Foox J, Faridi P, French A, Gebre S, Gordon P, Houerbi N, Valipour Kahrood H, Kiffer FC, Klosinska AS, Kubik A, Lee HC, Li Y, Lucarelli N, Marullo AL, Matei I, McCann CM, Mimar S, Naglah A, Nicod J, O'Shaughnessy KM, Oliveira LC, Oswalt L, Patras LI, Lai Polo SH, Rodr?guez-Lopez M, Roufosse C, Sadeghi-Alavijeh O, Sanchez-Hodge R, Paul AS, Schittenhelm RB, Schweickart A, Scott RT, Choy Lim Kam Sian TC, da Silveira WA, Slawinski H, Snell D, Sosa J, Saravia-Butler AM, Tabetah M, Tanuwidjaya E, Walker-Samuel S, Yang X, Zhang H, Godovac-Zimmermann J, Sarder P, Sanders LM, Costes SV, Campbell RAA, Karouia F, Mohamed-Alis V, Rodriques S, Lynham S, Steele JR, Baranzini S, Fazelinia H, Dai Z, Uruno A, Shiba D, Yamamoto M, A C Almeida E, Blaber E, Schisler JC, Eisch AJ, Muratani M, Zwart SR, Smith SM, Galazka JM, Mason CE, Beheshti A, Walsh SB. Cosmic kidney disease: an integrated pan-omic, physiological and morphological study into spaceflight-induced renal dysfunction. Nat Commun. 2024 Jun 11; 15(1):4923. PMID: 38862484.
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    4. Camera A, Tabetah M, Casta?eda V, Kim J, Galsinh AS, Haro-Vinueza A, Salinas I, Seylani A, Arif S, Das S, Mori MA, Carano A, de Oliveira LC, Muratani M, Barker R, Zaksas V, Goel C, Dimokidis E, Taylor DM, Jeong J, Overbey E, Meydan C, Porterfield DM, D?az JE, Caicedo A, Schisler JC, Laiakis EC, Mason CE, Kim MS, Karouia F, Szewczyk NJ, Beheshti A. Aging and putative frailty biomarkers are altered by spaceflight. Sci Rep. 2024 06 11; 14(1):13098. PMID: 38862573.
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    5. Seylani A, Galsinh AS, Tasoula A, I AR, Camera A, Calleja-Agius J, Borg J, Goel C, Kim J, Clark KB, Das S, Arif S, Boerrigter M, Coffey C, Szewczyk N, Mason CE, Manoli M, Karouia F, Schwertz H, Beheshti A, Tulodziecki D. Ethical considerations for the age of non-governmental space exploration. Nat Commun. 2024 Jun 11; 15(1):4774. PMID: 38862473.
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    6. Mathyk BA, Tabetah M, Karim R, Zaksas V, Kim J, Anu RI, Muratani M, Tasoula A, Singh RS, Chen YK, Overbey E, Park J, Cope H, Fazelinia H, Povero D, Borg J, Klotz RV, Yu M, Young SL, Mason CE, Szewczyk N, St Clair RM, Karouia F, Beheshti A. Spaceflight induces changes in gene expression profiles linked to insulin and estrogen. Commun Biol. 2024 06 11; 7(1):692. PMID: 38862620.
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    7. Spry JA, Siegel B, Bakermans C, Beaty DW, Bell MS, Benardini JN, Bonaccorsi R, Castro-Wallace SL, Coil DA, Coustenis A, Doran PT, Fenton L, Fidler DP, Glass B, Hoffman SJ, Karouia F, Levine JS, Lupisella ML, Martin-Torres J, Mogul R, Olsson-Francis K, Ortega-Ugalde S, Patel MR, Pearce DA, Race MS, Regberg AB, Rettberg P, Rummel JD, Sato KY, Schuerger AC, Sefton-Nash E, Sharkey M, Singh NK, Sinibaldi S, Stabekis P, Stoker CR, Venkateswaran KJ, Zimmerman RR, Zorzano-Mier MP. Planetary Protection Knowledge Gap Closure Enabling Crewed Missions to Mars. Astrobiology. 2024 Mar; 24(3):230-274. PMID: 38507695.
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    8. Leo P, de Melo Texeira M, Chander AM, Singh NK, Simpson AC, Yurkov A, Karouia F, Stajich JE, Mason CE, Venkateswaran K. Genomic characterization and radiation tolerance of Naganishia kalamii sp. nov. and Cystobasidium onofrii sp. nov. from Mars 2020 mission assembly facilities. IMA Fungus. 2023 Aug 11; 14(1):15. PMID: 37568226.
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    9. Simpson AC, Eedara VVR, Singh NK, Damle N, Parker CW, Karouia F, Mason CE, Venkateswaran K. Comparative genomic analysis of Cohnella hashimotonis sp. nov. isolated from the International Space Station. Front Microbiol. 2023; 14:1166013. PMID: 37396358.
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    10. Wiencek JR, Das S, Beheshti A, Crucian BE, Karouia F, Trudel G, McMonigal KA. Lab Medicine in Space. Clin Chem. 2023 04 28; 69(5):442-449. PMID: 37038963.
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    11. Drago-Ferrante R, Di Fiore R, Karouia F, Subbannayya Y, Das S, Aydogan Mathyk B, Arif S, Guevara-Cerd?n AP, Seylani A, Galsinh AS, Kukulska W, Borg J, Suleiman S, Porterfield DM, Camera A, Christenson LK, Ronca AE, Steller JG, Beheshti A, Calleja-Agius J. Extraterrestrial Gynecology: Could Spaceflight Increase the Risk of Developing Cancer in Female Astronauts? An Updated Review. Int J Mol Sci. 2022 Jul 05; 23(13). PMID: 35806469.
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    12. Urbaniak C, Morrison MD, Thissen JB, Karouia F, Smith DJ, Mehta S, Jaing C, Venkateswaran K. Microbial Tracking-2, a metagenomics analysis of bacteria and fungi onboard the International Space Station. Microbiome. 2022 06 29; 10(1):100. PMID: 35765106.
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    13. Morrison MD, Thissen JB, Karouia F, Mehta S, Urbaniak C, Venkateswaran K, Smith DJ, Jaing C. Investigation of Spaceflight Induced Changes to Astronaut Microbiomes. Front Microbiol. 2021; 12:659179. PMID: 34149649.
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    14. Mhatre S, Wood JM, Sielaff AC, Mora M, Duller S, Singh NK, Karouia F, Moissl-Eichinger C, Venkateswaran K. Assessing the Risk of Transfer of Microorganisms at the International Space Station Due to Cargo Delivery by Commercial Resupply Vehicles. Front Microbiol. 2020; 11:566412. PMID: 33240227.
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    15. Bharadwaj AR, Singh NK, Wood JM, Debieu M, O'Hara NB, Karouia F, Mason CE, Venkateswaran K. Draft Genome Sequences of Lactobacillales Isolated from the International Space Station. Microbiol Resour Announc. 2020 Sep 24; 9(39). PMID: 32972947.
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    16. Bharadwaj AR, Daudu R, Singh NK, Wood JM, Debieu M, O'Hara NB, Karouia F, Mason CE, Venkateswaran K. Draft Genome Sequences of Enterobacteriales Strains Isolated from the International Space Station. Microbiol Resour Announc. 2020 Sep 10; 9(37). PMID: 32912916.
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    17. Urbaniak C, Wong S, Tighe S, Arumugam A, Liu B, Parker CW, Wood JM, Singh NK, Skorupa DJ, Peyton BM, Jenson R, Karouia F, Dragon J, Venkateswaran K. Validating an Automated Nucleic Acid Extraction Device for Omics in Space Using Whole Cell Microbial Reference Standards. Front Microbiol. 2020; 11:1909. PMID: 32973700.
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    18. Avila-Herrera A, Thissen J, Urbaniak C, Be NA, Smith DJ, Karouia F, Mehta S, Venkateswaran K, Jaing C. Crewmember microbiome may influence microbial composition of ISS habitable surfaces. PLoS One. 2020; 15(4):e0231838. PMID: 32348348.
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    19. Cepeda C, Vergnes L, Carpo N, Schibler MJ, Bentolila LA, Karouia F, Espinosa-Jeffrey A. Human Neural Stem Cells Flown into Space Proliferate and Generate Young Neurons. Appl Sci (Basel). 2019 Oct 01; 9(19). PMID: 34484810.
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    20. Peyvan K, Karouia F, Cooper JJ, Chamberlain J, Suciu D, Slota M, Pohorille A. Gene Expression Measurement Module (GEMM) for space application: Design and validation. Life Sci Space Res (Amst). 2019 Aug; 22:55-67. PMID: 31421849.
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    21. Checinska Sielaff A, Urbaniak C, Mohan GBM, Stepanov VG, Tran Q, Wood JM, Minich J, McDonald D, Mayer T, Knight R, Karouia F, Fox GE, Venkateswaran K. Characterization of the total and viable bacterial and fungal communities associated with the International Space Station surfaces. Microbiome. 2019 04 08; 7(1):50. PMID: 30955503.
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    22. Tirumalai MR, Karouia F, Tran Q, Stepanov VG, Bruce RJ, Ott CM, Pierson DL, Fox GE. Evaluation of Acquired Antibiotic Resistance in Escherichia coli Exposed to Long-Term Low-Shear Modeled Microgravity and Background Antibiotic Exposure. mBio. 2019 01 15; 10(1). PMID: 30647159.
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    23. Romsdahl J, Blachowicz A, Chiang AJ, Chiang YM, Masonjones S, Yaegashi J, Countryman S, Karouia F, Kalkum M, Stajich JE, Venkateswaran K, Wang CCC. International Space Station conditions alter genomics, proteomics, and metabolomics in Aspergillus nidulans. Appl Microbiol Biotechnol. 2019 Feb; 103(3):1363-1377. PMID: 30539259.
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    24. Singh NK, Wood JM, Karouia F, Venkateswaran K. Correction to: Succession and persistence of microbial communities and antimicrobial resistance genes associated with International Space Station environmental surfaces. Microbiome. 2018 12 04; 6(1):214. PMID: 30514368.
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    25. Singh NK, Wood JM, Karouia F, Venkateswaran K. Succession and persistence of microbial communities and antimicrobial resistance genes associated with International Space Station environmental surfaces. Microbiome. 2018 11 13; 6(1):204. PMID: 30424821.
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    26. Tirumalai MR, Karouia F, Tran Q, Stepanov VG, Bruce RJ, Ott CM, Pierson DL, Fox GE. The adaptation of Escherichia coli cells grown in simulated microgravity for an extended period is both phenotypic and genomic. NPJ Microgravity. 2017; 3:15. PMID: 28649637.
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    27. Karouia F, Peyvan K, Pohorille A. Toward biotechnology in space: High-throughput instruments for in situ biological research beyond Earth. Biotechnol Adv. 2017 Nov 15; 35(7):905-932. PMID: 28433608.
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    28. Lu T, Zhang Y, Kidane Y, Feiveson A, Stodieck L, Karouia F, Ramesh G, Rohde L, Wu H. Cellular responses and gene expression profile changes due to bleomycin-induced DNA damage in human fibroblasts in space. PLoS One. 2017; 12(3):e0170358. PMID: 28248986.
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    29. Lu T, Zhang Y, Wong M, Feiveson A, Gaza R, Stoffle N, Wang H, Wilson B, Rohde L, Stodieck L, Karouia F, Wu H. Detection of DNA damage by space radiation in human fibroblasts flown on the International Space Station. Life Sci Space Res (Amst). 2017 Feb; 12:24-31. PMID: 28212705.
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    30. Zhang Y, Lu T, Wong M, Wang X, Stodieck L, Karouia F, Story M, Wu H. Transient gene and microRNA expression profile changes of confluent human fibroblast cells in spaceflight. FASEB J. 2016 06; 30(6):2211-24. PMID: 26917741.
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    31. Gioia J, Yerrapragada S, Qin X, Jiang H, Igboeli OC, Muzny D, Dugan-Rocha S, Ding Y, Hawes A, Liu W, Perez L, Kovar C, Dinh H, Lee S, Nazareth L, Blyth P, Holder M, Buhay C, Tirumalai MR, Liu Y, Dasgupta I, Bokhetache L, Fujita M, Karouia F, Eswara Moorthy P, Siefert J, Uzman A, Buzumbo P, Verma A, Zwiya H, McWilliams BD, Olowu A, Clinkenbeard KD, Newcombe D, Golebiewski L, Petrosino JF, Nicholson WL, Fox GE, Venkateswaran K, Highlander SK, Weinstock GM. Paradoxical DNA repair and peroxide resistance gene conservation in Bacillus pumilus SAFR-032. PLoS One. 2007 Sep 26; 2(9):e928. PMID: 17895969.
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    32. Tucker DL, Karouia F, Wang J, Luo Y, Li TB, Willson RC, Fofanov Y, Fox GE. Effect of an artificial RNA marker on gene expression in Escherichia coli. Appl Environ Microbiol. 2005 Jul; 71(7):4156-9. PMID: 16000839.
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