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Jacob T. Stanley

TitleResearch Associate
InstitutionUniversity of Colorado Boulder
DepartmentBiofrontiers Institute

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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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    1. Sigauke RF, Sanford L, Maas ZL, Jones T, Stanley JT, Townsend HA, Allen MA, Dowell RD. Atlas of nascent RNA transcripts reveals enhancer to gene linkages. bioRxiv. 2023 Dec 08. PMID: 38105978.
      View in: PubMed
    2. Kurland JV, Cutler AA, Stanley JT, Betta ND, Van Deusen A, Pawlikowski B, Hall M, Antwine T, Russell A, Allen MA, Dowell R, Olwin B. Aging disrupts gene expression timing during muscle regeneration. Stem Cell Reports. 2023 06 13; 18(6):1325-1339. PMID: 37315524.
      View in: PubMed
    3. Campeau S, McNulty C, Stanley JT, Gerber AN, Sasse SK, Dowell RD. Determination of steady-state transcriptome modifications associated with repeated homotypic stress in the rat rostral posterior hypothalamic region. Front Neurosci. 2023; 17:1173699. PMID: 37360161.
      View in: PubMed
    4. Hunter S, Sigauke RF, Stanley JT, Allen MA, Dowell RD. Protocol variations in run-on transcription dataset preparation produce detectable signatures in sequencing libraries. BMC Genomics. 2022 Mar 07; 23(1):187. PMID: 35255806.
      View in: PubMed
    5. Rubin JD, Stanley JT, Sigauke RF, Levandowski CB, Maas ZL, Westfall J, Taatjes DJ, Dowell RD. Transcription factor enrichment analysis (TFEA) quantifies the activity of multiple transcription factors from a single experiment. Commun Biol. 2021 06 02; 4(1):661. PMID: 34079046.
      View in: PubMed
    6. Stanley JT, Gilchrist AR, Stabell AC, Allen MA, Sawyer SL, Dowell RD. Two-stage ML Classifier for Identifying Host Protein Targets of the Dengue Protease. Pac Symp Biocomput. 2020; 25:487-498. PMID: 31797621.
      View in: PubMed
    7. Boucheron LS, Stanley JT, Dai Y, You SS, Parzyck CT, Narayanan S, Sandy AR, Jiang Z, Meron M, Lin B, Shpyrko OG. Stress relaxation in quasi-two-dimensional self-assembled nanoparticle monolayers. Phys Rev E. 2018 May; 97(5-1):052803. PMID: 29906983.
      View in: PubMed
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