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Connection

Tom Altman to Software

This is a "connection" page, showing publications Tom Altman has written about Software.

 
Connection Strength
 
 
 
0.639
 
  1. Karp PD, Paley S, Altman T. Data mining in the MetaCyc family of pathway databases. Methods Mol Biol. 2013; 939:183-200.
    View in: PubMed
    Score: 0.317
  2. Hu JC, Sherlock G, Siegele DA, Aleksander SA, Ball CA, Demeter J, Gouni S, Holland TA, Karp PD, Lewis JE, Liles NM, McIntosh BK, Mi H, Muruganujan A, Wymore F, Thomas PD, Altman T. PortEco: a resource for exploring bacterial biology through high-throughput data and analysis tools. Nucleic Acids Res. 2014 Jan; 42(Database issue):D677-84.
    View in: PubMed
    Score: 0.084
  3. Le T, Altman T, Gardiner K. HIGEDA: a hierarchical gene-set genetics based algorithm for finding subtle motifs in biological sequences. Bioinformatics. 2010 Feb 01; 26(3):302-9.
    View in: PubMed
    Score: 0.064
  4. Karp PD, Paley SM, Krummenacker M, Latendresse M, Dale JM, Lee TJ, Kaipa P, Gilham F, Spaulding A, Popescu L, Altman T, Paulsen I, Keseler IM, Caspi R. Pathway Tools version 13.0: integrated software for pathway/genome informatics and systems biology. Brief Bioinform. 2010 Jan; 11(1):40-79.
    View in: PubMed
    Score: 0.064
  5. Edgar RC, Taylor B, Lin V, Altman T, Barbera P, Meleshko D, Lohr D, Novakovsky G, Buchfink B, Al-Shayeb B, Banfield JF, de la Pe?a M, Korobeynikov A, Chikhi R, Babaian A. Petabase-scale sequence alignment catalyses viral discovery. Nature. 2022 02; 602(7895):142-147.
    View in: PubMed
    Score: 0.037
  6. Caspi R, Altman T, Billington R, Dreher K, Foerster H, Fulcher CA, Holland TA, Keseler IM, Kothari A, Kubo A, Krummenacker M, Latendresse M, Mueller LA, Ong Q, Paley S, Subhraveti P, Weaver DS, Weerasinghe D, Zhang P, Karp PD. The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of Pathway/Genome Databases. Nucleic Acids Res. 2014 Jan; 42(Database issue):D459-71.
    View in: PubMed
    Score: 0.021
  7. Caspi R, Altman T, Dreher K, Fulcher CA, Subhraveti P, Keseler IM, Kothari A, Krummenacker M, Latendresse M, Mueller LA, Ong Q, Paley S, Pujar A, Shearer AG, Travers M, Weerasinghe D, Zhang P, Karp PD. The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases. Nucleic Acids Res. 2012 Jan; 40(Database issue):D742-53.
    View in: PubMed
    Score: 0.018
  8. Keseler IM, Collado-Vides J, Santos-Zavaleta A, Peralta-Gil M, Gama-Castro S, Mu?iz-Rascado L, Bonavides-Martinez C, Paley S, Krummenacker M, Altman T, Kaipa P, Spaulding A, Pacheco J, Latendresse M, Fulcher C, Sarker M, Shearer AG, Mackie A, Paulsen I, Gunsalus RP, Karp PD. EcoCyc: a comprehensive database of Escherichia coli biology. Nucleic Acids Res. 2011 Jan; 39(Database issue):D583-90.
    View in: PubMed
    Score: 0.017
  9. Caspi R, Altman T, Dale JM, Dreher K, Fulcher CA, Gilham F, Kaipa P, Karthikeyan AS, Kothari A, Krummenacker M, Latendresse M, Mueller LA, Paley S, Popescu L, Pujar A, Shearer AG, Zhang P, Karp PD. The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases. Nucleic Acids Res. 2010 Jan; 38(Database issue):D473-9.
    View in: PubMed
    Score: 0.016
Connection Strength

The connection strength for concepts is the sum of the scores for each matching publication.

Publication scores are based on many factors, including how long ago they were written and whether the person is a first or senior author.

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