 Connection
Gregg Beckham to Bacterial Proteins
This is a "connection" page, showing publications Gregg Beckham has written about Bacterial Proteins.
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Connection Strength |
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3.290 |
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Werner AZ, Giannone RJ, Keller MJ, Plavchak C, Carper DL, Abraham PE, Wilkes RA, Aristilde L, Salvachúa D, Ratanathanawongs Williams SK, Hettich RL, Beckham GT. A distinct subpopulation of membrane vesicles in Pseudomonas putida is enriched in enzymes for lignin catabolism. Appl Environ Microbiol. 2025 Oct 22; 91(10):e0161725.
Score: 0.583
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Prates ET, Crowley MF, Skaf MS, Beckham GT. Catalytic Mechanism of Aryl-Ether Bond Cleavage in Lignin by LigF and LigG. J Phys Chem B. 2019 12 05; 123(48):10142-10151.
Score: 0.388
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Franden MA, Jayakody LN, Li WJ, Wagner NJ, Cleveland NS, Michener WE, Hauer B, Blank LM, Wierckx N, Klebensberger J, Beckham GT. Engineering Pseudomonas putida KT2440 for efficient ethylene glycol utilization. Metab Eng. 2018 07; 48:197-207.
Score: 0.351
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Austin HP, Allen MD, Donohoe BS, Rorrer NA, Kearns FL, Silveira RL, Pollard BC, Dominick G, Duman R, El Omari K, Mykhaylyk V, Wagner A, Michener WE, Amore A, Skaf MS, Crowley MF, Thorne AW, Johnson CW, Woodcock HL, McGeehan JE, Beckham GT. Characterization and engineering of a plastic-degrading aromatic polyesterase. Proc Natl Acad Sci U S A. 2018 05 08; 115(19):E4350-E4357.
Score: 0.348
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Wilkes RA, Miller TE, Waldbauer J, Zhou N, Zhang L, DiBiase BN, Kamat NP, Aristilde L, Beckham GT, Werner AZ. Engineered Membrane Vesicle Production via oprF or oprI Deletion Has Distinct Phenotypic Effects in Pseudomonas putida. ACS Synth Biol. 2025 Jul 18; 14(7):2739-2752.
Score: 0.143
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Holmes EC, Breunig SL, Johnson CW, Beckham GT, Bleem AC. Insights into genetic determinants of volatile fatty acid catabolism in Cupriavidus necator H16. Appl Environ Microbiol. 2025 Jul 23; 91(7):e0051525.
Score: 0.143
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Holmes EC, Bleem AC, Johnson CW, Beckham GT. Adaptive laboratory evolution and metabolic engineering of Cupriavidus necator for improved catabolism of volatile fatty acids. Metab Eng. 2024 Nov; 86:262-273.
Score: 0.137
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Bleem AC, Kuatsjah E, Johnsen J, Mohamed ET, Alexander WG, Kellermyer ZA, Carroll AL, Rossi R, Schlander IB, Peabody V GL, Guss AM, Feist AM, Beckham GT. Evolution and engineering of pathways for aromatic O-demethylation in Pseudomonas putida KT2440. Metab Eng. 2024 Jul; 84:145-157.
Score: 0.133
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Kuatsjah E, Zahn M, Chen X, Kato R, Hinchen DJ, Konev MO, Katahira R, Orr C, Wagner A, Zou Y, Haugen SJ, Ramirez KJ, Michener JK, Pickford AR, Kamimura N, Masai E, Houk KN, McGeehan JE, Beckham GT. Biochemical and structural characterization of a sphingomonad diarylpropane lyase for cofactorless deformylation. Proc Natl Acad Sci U S A. 2023 01 24; 120(4):e2212246120.
Score: 0.121
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Kuatsjah E, Chan ACK, Katahira R, Haugen SJ, Beckham GT, Murphy MEP, Eltis LD. Structural and functional analysis of lignostilbene dioxygenases from Sphingobium sp. SYK-6. J Biol Chem. 2021 Jan-Jun; 296:100758.
Score: 0.107
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Fetherolf MM, Levy-Booth DJ, Navas LE, Liu J, Grigg JC, Wilson A, Katahira R, Beckham GT, Mohn WW, Eltis LD. Characterization of alkylguaiacol-degrading cytochromes P450 for the biocatalytic valorization of lignin. Proc Natl Acad Sci U S A. 2020 10 13; 117(41):25771-25778.
Score: 0.103
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Knott BC, Erickson E, Allen MD, Gado JE, Graham R, Kearns FL, Pardo I, Topuzlu E, Anderson JJ, Austin HP, Dominick G, Johnson CW, Rorrer NA, Szostkiewicz CJ, Copié V, Payne CM, Woodcock HL, Donohoe BS, Beckham GT, McGeehan JE. Characterization and engineering of a two-enzyme system for plastics depolymerization. Proc Natl Acad Sci U S A. 2020 10 13; 117(41):25476-25485.
Score: 0.103
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Bissaro B, Streit B, Isaksen I, Eijsink VGH, Beckham GT, DuBois JL, Røhr ÅK. Molecular mechanism of the chitinolytic peroxygenase reaction. Proc Natl Acad Sci U S A. 2020 01 21; 117(3):1504-1513.
Score: 0.098
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Mallinson SJB, Machovina MM, Silveira RL, Garcia-Borràs M, Gallup N, Johnson CW, Allen MD, Skaf MS, Crowley MF, Neidle EL, Houk KN, Beckham GT, DuBois JL, McGeehan JE. A promiscuous cytochrome P450 aromatic O-demethylase for lignin bioconversion. Nat Commun. 2018 06 27; 9(1):2487.
Score: 0.088
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Tumen-Velasquez M, Johnson CW, Ahmed A, Dominick G, Fulk EM, Khanna P, Lee SA, Schmidt AL, Linger JG, Eiteman MA, Beckham GT, Neidle EL. Accelerating pathway evolution by increasing the gene dosage of chromosomal segments. Proc Natl Acad Sci U S A. 2018 07 03; 115(27):7105-7110.
Score: 0.088
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Jana S, Hamre AG, Wildberger P, Holen MM, Eijsink VG, Beckham GT, Sørlie M, Payne CM. Aromatic-Mediated Carbohydrate Recognition in Processive Serratia marcescens Chitinases. J Phys Chem B. 2016 Feb 25; 120(7):1236-49.
Score: 0.075
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Wu M, Bu L, Vuong TV, Wilson DB, Crowley MF, Sandgren M, Ståhlberg J, Beckham GT, Hansson H. Loop motions important to product expulsion in the Thermobifida fusca glycoside hydrolase family 6 cellobiohydrolase from structural and computational studies. J Biol Chem. 2013 Nov 15; 288(46):33107-17.
Score: 0.063
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Payne CM, Baban J, Horn SJ, Backe PH, Arvai AS, Dalhus B, Bjørås M, Eijsink VG, Sørlie M, Beckham GT, Vaaje-Kolstad G. Hallmarks of processivity in glycoside hydrolases from crystallographic and computational studies of the Serratia marcescens chitinases. J Biol Chem. 2012 Oct 19; 287(43):36322-30.
Score: 0.059
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Zhou N, Wilkes RA, Chen X, Teitel KP, Belgrave JA, Beckham GT, Werner AZ, Yu Y, Aristilde L. Quantitative decoding of coupled carbon and energy metabolism in Pseudomonas putida for lignin carbon utilization. Commun Biol. 2025 Aug 29; 8(1):1310.
Score: 0.036
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Baugh AC, Tumen-Velasquez MP, Zempel IR, Duscent-Maitland CV, Slarks LE, Defalco JB, Johnson CW, Beckham GT, Neidle EL. Rewiring Aromatic Compound Consumption: Chromosomal Amplification and Evolution of a Foreign Pathway in Acinetobacter baylyi ADP1. ACS Synth Biol. 2025 Sep 19; 14(9):3543-3556.
Score: 0.036
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Stepnov AA, Lopez-Tavera E, Klauer R, Lincoln CL, Chowreddy RR, Beckham GT, Eijsink VGH, Solomon K, Blenner M, Vaaje-Kolstad G. Revisiting the activity of two poly(vinyl chloride)- and polyethylene-degrading enzymes. Nat Commun. 2024 10 01; 15(1):8501.
Score: 0.034
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Elmore JR, Dexter GN, Salvachúa D, Martinez-Baird J, Hatmaker EA, Huenemann JD, Klingeman DM, Peabody GL, Peterson DJ, Singer C, Beckham GT, Guss AM. Production of itaconic acid from alkali pretreated lignin by dynamic two stage bioconversion. Nat Commun. 2021 04 15; 12(1):2261.
Score: 0.027
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Wada A, Prates ÉT, Hirano R, Werner AZ, Kamimura N, Jacobson DA, Beckham GT, Masai E. Characterization of aromatic acid/proton symporters in Pseudomonas putida KT2440 toward efficient microbial conversion of lignin-related aromatics. Metab Eng. 2021 03; 64:167-179.
Score: 0.026
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Connection Strength
The connection strength for concepts is the sum of the scores for each matching publication.
Publication scores are based on many factors, including how long ago they were written and whether the person is a first or senior author.
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