Colorado PROFILES, The Colorado Clinical and Translational Sciences Institute (CCTSI)
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Connection

Noah Fierer to RNA, Ribosomal, 16S

This is a "connection" page, showing publications Noah Fierer has written about RNA, Ribosomal, 16S.

 
Connection Strength
 
 
 
4.196
 
  1. Flores GE, Henley JB, Fierer N. A direct PCR approach to accelerate analyses of human-associated microbial communities. PLoS One. 2012; 7(9):e44563.
    View in: PubMed
    Score: 0.365
  2. Webster TM, McFarland A, Gebert MJ, Oliverio AM, Nichols LM, Dunn RR, Hartmann EM, Fierer N. Structure and Functional Attributes of Bacterial Communities in Premise Plumbing Across the United States. Environ Sci Technol. 2021 10 19; 55(20):14105-14114.
    View in: PubMed
    Score: 0.171
  3. Carini P, Delgado-Baquerizo M, Hinckley ES, Holland-Moritz H, Brewer TE, Rue G, Vanderburgh C, McKnight D, Fierer N. Effects of Spatial Variability and Relic DNA Removal on the Detection of Temporal Dynamics in Soil Microbial Communities. mBio. 2020 01 21; 11(1).
    View in: PubMed
    Score: 0.152
  4. Brewer TE, Albertsen M, Edwards A, Kirkegaard RH, Rocha EPC, Fierer N. Unlinked rRNA genes are widespread among bacteria and archaea. ISME J. 2020 02; 14(2):597-608.
    View in: PubMed
    Score: 0.150
  5. Walsh CM, Gebert MJ, Delgado-Baquerizo M, Maestre FT, Fierer N. A Global Survey of Mycobacterial Diversity in Soil. Appl Environ Microbiol. 2019 09 01; 85(17).
    View in: PubMed
    Score: 0.148
  6. Hammer TJ, Sanders JG, Fierer N. Not all animals need a microbiome. FEMS Microbiol Lett. 2019 05 01; 366(10).
    View in: PubMed
    Score: 0.145
  7. Hammer TJ, Janzen DH, Hallwachs W, Jaffe SP, Fierer N. Caterpillars lack a resident gut microbiome. Proc Natl Acad Sci U S A. 2017 09 05; 114(36):9641-9646.
    View in: PubMed
    Score: 0.129
  8. Emerson JB, Keady PB, Clements N, Morgan EE, Awerbuch J, Miller SL, Fierer N. High temporal variability in airborne bacterial diversity and abundance inside single-family residences. Indoor Air. 2017 05; 27(3):576-586.
    View in: PubMed
    Score: 0.122
  9. Bergmann GT, Craine JM, Robeson MS, Fierer N. Seasonal Shifts in Diet and Gut Microbiota of the American Bison (Bison bison). PLoS One. 2015; 10(11):e0142409.
    View in: PubMed
    Score: 0.114
  10. Emerson JB, Keady PB, Brewer TE, Clements N, Morgan EE, Awerbuch J, Miller SL, Fierer N. Impacts of flood damage on airborne bacteria and fungi in homes after the 2013 Colorado Front Range flood. Environ Sci Technol. 2015 Mar 03; 49(5):2675-84.
    View in: PubMed
    Score: 0.108
  11. Leff JW, Del Tredici P, Friedman WE, Fierer N. Spatial structuring of bacterial communities within individual Ginkgo biloba trees. Environ Microbiol. 2015 Jul; 17(7):2352-61.
    View in: PubMed
    Score: 0.107
  12. Ramirez KS, Leff JW, Barber?n A, Bates ST, Betley J, Crowther TW, Kelly EF, Oldfield EE, Shaw EA, Steenbock C, Bradford MA, Wall DH, Fierer N. Biogeographic patterns in below-ground diversity in New York City's Central Park are similar to those observed globally. Proc Biol Sci. 2014 Nov 22; 281(1795).
    View in: PubMed
    Score: 0.107
  13. Seite S, Flores GE, Henley JB, Martin R, Zelenkova H, Aguilar L, Fierer N. Microbiome of affected and unaffected skin of patients with atopic dermatitis before and after emollient treatment. J Drugs Dermatol. 2014 Nov; 13(11):1365-72.
    View in: PubMed
    Score: 0.106
  14. Barber?n A, Ramirez KS, Leff JW, Bradford MA, Wall DH, Fierer N. Why are some microbes more ubiquitous than others? Predicting the habitat breadth of soil bacteria. Ecol Lett. 2014 Jul; 17(7):794-802.
    View in: PubMed
    Score: 0.102
  15. Bowers RM, Clements N, Emerson JB, Wiedinmyer C, Hannigan MP, Fierer N. Seasonal variability in bacterial and fungal diversity of the near-surface atmosphere. Environ Sci Technol. 2013; 47(21):12097-106.
    View in: PubMed
    Score: 0.099
  16. Portillo MC, Leff JW, Lauber CL, Fierer N. Cell size distributions of soil bacterial and archaeal taxa. Appl Environ Microbiol. 2013 Dec; 79(24):7610-7.
    View in: PubMed
    Score: 0.098
  17. Jones RT, Sanchez LG, Fierer N. A cross-taxon analysis of insect-associated bacterial diversity. PLoS One. 2013; 8(4):e61218.
    View in: PubMed
    Score: 0.095
  18. Shade A, Caporaso JG, Handelsman J, Knight R, Fierer N. A meta-analysis of changes in bacterial and archaeal communities with time. ISME J. 2013 Aug; 7(8):1493-506.
    View in: PubMed
    Score: 0.095
  19. Lauber CL, Ramirez KS, Aanderud Z, Lennon J, Fierer N. Temporal variability in soil microbial communities across land-use types. ISME J. 2013 Aug; 7(8):1641-50.
    View in: PubMed
    Score: 0.095
  20. Fierer N, Leff JW, Adams BJ, Nielsen UN, Bates ST, Lauber CL, Owens S, Gilbert JA, Wall DH, Caporaso JG. Cross-biome metagenomic analyses of soil microbial communities and their functional attributes. Proc Natl Acad Sci U S A. 2012 Dec 26; 109(52):21390-5.
    View in: PubMed
    Score: 0.093
  21. Flores GE, Bates ST, Caporaso JG, Lauber CL, Leff JW, Knight R, Fierer N. Diversity, distribution and sources of bacteria in residential kitchens. Environ Microbiol. 2013 Feb; 15(2):588-96.
    View in: PubMed
    Score: 0.093
  22. Fierer N, Lauber CL, Ramirez KS, Zaneveld J, Bradford MA, Knight R. Comparative metagenomic, phylogenetic and physiological analyses of soil microbial communities across nitrogen gradients. ISME J. 2012 May; 6(5):1007-17.
    View in: PubMed
    Score: 0.087
  23. Barber?n A, Bates ST, Casamayor EO, Fierer N. Using network analysis to explore co-occurrence patterns in soil microbial communities. ISME J. 2012 Feb; 6(2):343-51.
    View in: PubMed
    Score: 0.085
  24. Fierer N, McCain CM, Meir P, Zimmermann M, Rapp JM, Silman MR, Knight R. Microbes do not follow the elevational diversity patterns of plants and animals. Ecology. 2011 Apr; 92(4):797-804.
    View in: PubMed
    Score: 0.083
  25. Bates ST, Cropsey GW, Caporaso JG, Knight R, Fierer N. Bacterial communities associated with the lichen symbiosis. Appl Environ Microbiol. 2011 Feb; 77(4):1309-14.
    View in: PubMed
    Score: 0.081
  26. Ramirez KS, Lauber CL, Knight R, Bradford MA, Fierer N. Consistent effects of nitrogen fertilization on soil bacterial communities in contrasting systems. Ecology. 2010 Dec; 91(12):3463-70; discussion 3503-14.
    View in: PubMed
    Score: 0.081
  27. Bates ST, Berg-Lyons D, Caporaso JG, Walters WA, Knight R, Fierer N. Examining the global distribution of dominant archaeal populations in soil. ISME J. 2011 May; 5(5):908-17.
    View in: PubMed
    Score: 0.081
  28. Redford AJ, Bowers RM, Knight R, Linhart Y, Fierer N. The ecology of the phyllosphere: geographic and phylogenetic variability in the distribution of bacteria on tree leaves. Environ Microbiol. 2010 Nov; 12(11):2885-93.
    View in: PubMed
    Score: 0.080
  29. Caporaso JG, Lauber CL, Walters WA, Berg-Lyons D, Lozupone CA, Turnbaugh PJ, Fierer N, Knight R. Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample. Proc Natl Acad Sci U S A. 2011 Mar 15; 108 Suppl 1:4516-22.
    View in: PubMed
    Score: 0.078
  30. Caporaso JG, Kuczynski J, Stombaugh J, Bittinger K, Bushman FD, Costello EK, Fierer N, Pe?a AG, Goodrich JK, Gordon JI, Huttley GA, Kelley ST, Knights D, Koenig JE, Ley RE, Lozupone CA, McDonald D, Muegge BD, Pirrung M, Reeder J, Sevinsky JR, Turnbaugh PJ, Walters WA, Widmann J, Yatsunenko T, Zaneveld J, Knight R. QIIME allows analysis of high-throughput community sequencing data. Nat Methods. 2010 May; 7(5):335-6.
    View in: PubMed
    Score: 0.077
  31. Lauber CL, Zhou N, Gordon JI, Knight R, Fierer N. Effect of storage conditions on the assessment of bacterial community structure in soil and human-associated samples. FEMS Microbiol Lett. 2010 Jun; 307(1):80-6.
    View in: PubMed
    Score: 0.077
  32. Bowers RM, Lauber CL, Wiedinmyer C, Hamady M, Hallar AG, Fall R, Knight R, Fierer N. Characterization of airborne microbial communities at a high-elevation site and their potential to act as atmospheric ice nuclei. Appl Environ Microbiol. 2009 Aug; 75(15):5121-30.
    View in: PubMed
    Score: 0.073
  33. Fierer N, Carney KM, Horner-Devine MC, Megonigal JP. The biogeography of ammonia-oxidizing bacterial communities in soil. Microb Ecol. 2009 Aug; 58(2):435-45.
    View in: PubMed
    Score: 0.072
  34. Redford AJ, Fierer N. Bacterial succession on the leaf surface: a novel system for studying successional dynamics. Microb Ecol. 2009 Jul; 58(1):189-98.
    View in: PubMed
    Score: 0.071
  35. Fierer N, Liu Z, Rodr?guez-Hern?ndez M, Knight R, Henn M, Hernandez MT. Short-term temporal variability in airborne bacterial and fungal populations. Appl Environ Microbiol. 2008 Jan; 74(1):200-7.
    View in: PubMed
    Score: 0.065
  36. Fierer N, Morse JL, Berthrong ST, Bernhardt ES, Jackson RB. Environmental controls on the landscape-scale biogeography of stream bacterial communities. Ecology. 2007 Sep; 88(9):2162-73.
    View in: PubMed
    Score: 0.065
  37. Steen AD, Crits-Christoph A, Carini P, DeAngelis KM, Fierer N, Lloyd KG, Cameron Thrash J. High proportions of bacteria and archaea across most biomes remain uncultured. ISME J. 2019 12; 13(12):3126-3130.
    View in: PubMed
    Score: 0.037
  38. Thompson LR, Sanders JG, McDonald D, Amir A, Ladau J, Locey KJ, Prill RJ, Tripathi A, Gibbons SM, Ackermann G, Navas-Molina JA, Janssen S, Kopylova E, V?zquez-Baeza Y, Gonz?lez A, Morton JT, Mirarab S, Zech Xu Z, Jiang L, Haroon MF, Kanbar J, Zhu Q, Jin Song S, Kosciolek T, Bokulich NA, Lefler J, Brislawn CJ, Humphrey G, Owens SM, Hampton-Marcell J, Berg-Lyons D, McKenzie V, Fierer N, Fuhrman JA, Clauset A, Stevens RL, Shade A, Pollard KS, Goodwin KD, Jansson JK, Gilbert JA, Knight R. A communal catalogue reveals Earth's multiscale microbial diversity. Nature. 2017 11 23; 551(7681):457-463.
    View in: PubMed
    Score: 0.033
  39. Zapka C, Leff J, Henley J, Tittl J, De Nardo E, Butler M, Griggs R, Fierer N, Edmonds-Wilson S. Comparison of Standard Culture-Based Method to Culture-Independent Method for Evaluation of Hygiene Effects on the Hand Microbiome. mBio. 2017 03 28; 8(2).
    View in: PubMed
    Score: 0.031
  40. Shade A, Jones SE, Caporaso JG, Handelsman J, Knight R, Fierer N, Gilbert JA. Conditionally rare taxa disproportionately contribute to temporal changes in microbial diversity. mBio. 2014 Jul 15; 5(4):e01371-14.
    View in: PubMed
    Score: 0.026
  41. Forsberg KJ, Patel S, Gibson MK, Lauber CL, Knight R, Fierer N, Dantas G. Bacterial phylogeny structures soil resistomes across habitats. Nature. 2014 May 29; 509(7502):612-6.
    View in: PubMed
    Score: 0.026
  42. Stopnisek N, Bodenhausen N, Frey B, Fierer N, Eberl L, Weisskopf L. Genus-wide acid tolerance accounts for the biogeographical distribution of soil Burkholderia populations. Environ Microbiol. 2014 Jun; 16(6):1503-12.
    View in: PubMed
    Score: 0.024
  43. Hulcr J, Latimer AM, Henley JB, Rountree NR, Fierer N, Lucky A, Lowman MD, Dunn RR. A jungle in there: bacteria in belly buttons are highly diverse, but predictable. PLoS One. 2012; 7(11):e47712.
    View in: PubMed
    Score: 0.023
  44. Shade A, Read JS, Youngblut ND, Fierer N, Knight R, Kratz TK, Lottig NR, Roden EE, Stanley EH, Stombaugh J, Whitaker RJ, Wu CH, McMahon KD. Lake microbial communities are resilient after a whole-ecosystem disturbance. ISME J. 2012 Dec; 6(12):2153-67.
    View in: PubMed
    Score: 0.023
  45. McKenzie VJ, Bowers RM, Fierer N, Knight R, Lauber CL. Co-habiting amphibian species harbor unique skin bacterial communities in wild populations. ISME J. 2012 Mar; 6(3):588-96.
    View in: PubMed
    Score: 0.021
  46. Nemergut DR, Costello EK, Hamady M, Lozupone C, Jiang L, Schmidt SK, Fierer N, Townsend AR, Cleveland CC, Stanish L, Knight R. Global patterns in the biogeography of bacterial taxa. Environ Microbiol. 2011 Jan; 13(1):135-144.
    View in: PubMed
    Score: 0.020
  47. Caporaso JG, Lauber CL, Costello EK, Berg-Lyons D, Gonzalez A, Stombaugh J, Knights D, Gajer P, Ravel J, Fierer N, Gordon JI, Knight R. Moving pictures of the human microbiome. Genome Biol. 2011; 12(5):R50.
    View in: PubMed
    Score: 0.020
  48. Chu H, Fierer N, Lauber CL, Caporaso JG, Knight R, Grogan P. Soil bacterial diversity in the Arctic is not fundamentally different from that found in other biomes. Environ Microbiol. 2010 Nov; 12(11):2998-3006.
    View in: PubMed
    Score: 0.020
  49. Dominguez-Bello MG, Costello EK, Contreras M, Magris M, Hidalgo G, Fierer N, Knight R. Delivery mode shapes the acquisition and structure of the initial microbiota across multiple body habitats in newborns. Proc Natl Acad Sci U S A. 2010 Jun 29; 107(26):11971-5.
    View in: PubMed
    Score: 0.020
  50. Costello EK, Lauber CL, Hamady M, Fierer N, Gordon JI, Knight R. Bacterial community variation in human body habitats across space and time. Science. 2009 Dec 18; 326(5960):1694-7.
    View in: PubMed
    Score: 0.019
Connection Strength

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