 Connection
Noah Fierer to Sequence Analysis, DNA
This is a "connection" page, showing publications Noah Fierer has written about Sequence Analysis, DNA.
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Connection Strength |
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1.935 |
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Lauber CL, Hamady M, Knight R, Fierer N. Pyrosequencing-based assessment of soil pH as a predictor of soil bacterial community structure at the continental scale. Appl Environ Microbiol. 2009 Aug; 75(15):5111-20.
Score: 0.257
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Hammer TJ, Sanders JG, Fierer N. Not all animals need a microbiome. FEMS Microbiol Lett. 2019 05 01; 366(10).
Score: 0.128
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Emerson JB, Keady PB, Clements N, Morgan EE, Awerbuch J, Miller SL, Fierer N. High temporal variability in airborne bacterial diversity and abundance inside single-family residences. Indoor Air. 2017 05; 27(3):576-586.
Score: 0.108
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Bergmann GT, Craine JM, Robeson MS, Fierer N. Seasonal Shifts in Diet and Gut Microbiota of the American Bison (Bison bison). PLoS One. 2015; 10(11):e0142409.
Score: 0.101
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Ramirez KS, Leff JW, Barber?n A, Bates ST, Betley J, Crowther TW, Kelly EF, Oldfield EE, Shaw EA, Steenbock C, Bradford MA, Wall DH, Fierer N. Biogeographic patterns in below-ground diversity in New York City's Central Park are similar to those observed globally. Proc Biol Sci. 2014 Nov 22; 281(1795).
Score: 0.094
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Portillo MC, Leff JW, Lauber CL, Fierer N. Cell size distributions of soil bacterial and archaeal taxa. Appl Environ Microbiol. 2013 Dec; 79(24):7610-7.
Score: 0.087
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McGuire KL, Payne SG, Palmer MI, Gillikin CM, Keefe D, Kim SJ, Gedallovich SM, Discenza J, Rangamannar R, Koshner JA, Massmann AL, Orazi G, Essene A, Leff JW, Fierer N. Digging the New York City Skyline: soil fungal communities in green roofs and city parks. PLoS One. 2013; 8(3):e58020.
Score: 0.083
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Fierer N, Lauber CL, Ramirez KS, Zaneveld J, Bradford MA, Knight R. Comparative metagenomic, phylogenetic and physiological analyses of soil microbial communities across nitrogen gradients. ISME J. 2012 May; 6(5):1007-17.
Score: 0.076
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Jones RT, Bressan A, Greenwell AM, Fierer N. Bacterial communities of two parthenogenetic aphid species cocolonizing two host plants across the Hawaiian Islands. Appl Environ Microbiol. 2011 Dec; 77(23):8345-9.
Score: 0.076
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Yilmaz P, Kottmann R, Field D, Knight R, Cole JR, Amaral-Zettler L, Gilbert JA, Karsch-Mizrachi I, Johnston A, Cochrane G, Vaughan R, Hunter C, Park J, Morrison N, Rocca-Serra P, Sterk P, Arumugam M, Bailey M, Baumgartner L, Birren BW, Blaser MJ, Bonazzi V, Booth T, Bork P, Bushman FD, Buttigieg PL, Chain PS, Charlson E, Costello EK, Huot-Creasy H, Dawyndt P, DeSantis T, Fierer N, Fuhrman JA, Gallery RE, Gevers D, Gibbs RA, San Gil I, Gonzalez A, Gordon JI, Guralnick R, Hankeln W, Highlander S, Hugenholtz P, Jansson J, Kau AL, Kelley ST, Kennedy J, Knights D, Koren O, Kuczynski J, Kyrpides N, Larsen R, Lauber CL, Legg T, Ley RE, Lozupone CA, Ludwig W, Lyons D, Maguire E, Meth? BA, Meyer F, Muegge B, Nakielny S, Nelson KE, Nemergut D, Neufeld JD, Newbold LK, Oliver AE, Pace NR, Palanisamy G, Peplies J, Petrosino J, Proctor L, Pruesse E, Quast C, Raes J, Ratnasingham S, Ravel J, Relman DA, Assunta-Sansone S, Schloss PD, Schriml L, Sinha R, Smith MI, Sodergren E, Spo A, Stombaugh J, Tiedje JM, Ward DV, Weinstock GM, Wendel D, White O, Whiteley A, Wilke A, Wortman JR, Yatsunenko T, Gl?ckner FO. Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications. Nat Biotechnol. 2011 May; 29(5):415-20.
Score: 0.073
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Bates ST, Cropsey GW, Caporaso JG, Knight R, Fierer N. Bacterial communities associated with the lichen symbiosis. Appl Environ Microbiol. 2011 Feb; 77(4):1309-14.
Score: 0.072
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Bates ST, Berg-Lyons D, Caporaso JG, Walters WA, Knight R, Fierer N. Examining the global distribution of dominant archaeal populations in soil. ISME J. 2011 May; 5(5):908-17.
Score: 0.071
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Caporaso JG, Lauber CL, Walters WA, Berg-Lyons D, Lozupone CA, Turnbaugh PJ, Fierer N, Knight R. Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample. Proc Natl Acad Sci U S A. 2011 Mar 15; 108 Suppl 1:4516-22.
Score: 0.069
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Rousk J, B??th E, Brookes PC, Lauber CL, Lozupone C, Caporaso JG, Knight R, Fierer N. Soil bacterial and fungal communities across a pH gradient in an arable soil. ISME J. 2010 Oct; 4(10):1340-51.
Score: 0.069
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Kuczynski J, Costello EK, Nemergut DR, Zaneveld J, Lauber CL, Knights D, Koren O, Fierer N, Kelley ST, Ley RE, Gordon JI, Knight R. Direct sequencing of the human microbiome readily reveals community differences. Genome Biol. 2010; 11(5):210.
Score: 0.069
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Lauber CL, Zhou N, Gordon JI, Knight R, Fierer N. Effect of storage conditions on the assessment of bacterial community structure in soil and human-associated samples. FEMS Microbiol Lett. 2010 Jun; 307(1):80-6.
Score: 0.068
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Bowers RM, Lauber CL, Wiedinmyer C, Hamady M, Hallar AG, Fall R, Knight R, Fierer N. Characterization of airborne microbial communities at a high-elevation site and their potential to act as atmospheric ice nuclei. Appl Environ Microbiol. 2009 Aug; 75(15):5121-30.
Score: 0.064
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Redford AJ, Fierer N. Bacterial succession on the leaf surface: a novel system for studying successional dynamics. Microb Ecol. 2009 Jul; 58(1):189-98.
Score: 0.063
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Jones RT, Robeson MS, Lauber CL, Hamady M, Knight R, Fierer N. A comprehensive survey of soil acidobacterial diversity using pyrosequencing and clone library analyses. ISME J. 2009 Apr; 3(4):442-53.
Score: 0.063
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Fierer N, Liu Z, Rodr?guez-Hern?ndez M, Knight R, Henn M, Hernandez MT. Short-term temporal variability in airborne bacterial and fungal populations. Appl Environ Microbiol. 2008 Jan; 74(1):200-7.
Score: 0.058
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Bowers RM, Kyrpides NC, Stepanauskas R, Harmon-Smith M, Doud D, Reddy TBK, Schulz F, Jarett J, Rivers AR, Eloe-Fadrosh EA, Tringe SG, Ivanova NN, Copeland A, Clum A, Becraft ED, Malmstrom RR, Birren B, Podar M, Bork P, Weinstock GM, Garrity GM, Dodsworth JA, Yooseph S, Sutton G, Gl?ckner FO, Gilbert JA, Nelson WC, Hallam SJ, Jungbluth SP, Ettema TJG, Tighe S, Konstantinidis KT, Liu WT, Baker BJ, Rattei T, Eisen JA, Hedlund B, McMahon KD, Fierer N, Knight R, Finn R, Cochrane G, Karsch-Mizrachi I, Tyson GW, Rinke C, Lapidus A, Meyer F, Yilmaz P, Parks DH, Eren AM, Schriml L, Banfield JF, Hugenholtz P, Woyke T. Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea. Nat Biotechnol. 2017 Aug 08; 35(8):725-731.
Score: 0.028
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Zapka C, Leff J, Henley J, Tittl J, De Nardo E, Butler M, Griggs R, Fierer N, Edmonds-Wilson S. Comparison of Standard Culture-Based Method to Culture-Independent Method for Evaluation of Hygiene Effects on the Hand Microbiome. mBio. 2017 03 28; 8(2).
Score: 0.028
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Hulcr J, Latimer AM, Henley JB, Rountree NR, Fierer N, Lucky A, Lowman MD, Dunn RR. A jungle in there: bacteria in belly buttons are highly diverse, but predictable. PLoS One. 2012; 7(11):e47712.
Score: 0.020
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Shade A, Read JS, Youngblut ND, Fierer N, Knight R, Kratz TK, Lottig NR, Roden EE, Stanley EH, Stombaugh J, Whitaker RJ, Wu CH, McMahon KD. Lake microbial communities are resilient after a whole-ecosystem disturbance. ISME J. 2012 Dec; 6(12):2153-67.
Score: 0.020
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Knight R, Jansson J, Field D, Fierer N, Desai N, Fuhrman JA, Hugenholtz P, van der Lelie D, Meyer F, Stevens R, Bailey MJ, Gordon JI, Kowalchuk GA, Gilbert JA. Unlocking the potential of metagenomics through replicated experimental design. Nat Biotechnol. 2012 Jun 07; 30(6):513-20.
Score: 0.020
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Hulcr J, Rountree NR, Diamond SE, Stelinski LL, Fierer N, Dunn RR. Mycangia of ambrosia beetles host communities of bacteria. Microb Ecol. 2012 Oct; 64(3):784-93.
Score: 0.020
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McKenzie VJ, Bowers RM, Fierer N, Knight R, Lauber CL. Co-habiting amphibian species harbor unique skin bacterial communities in wild populations. ISME J. 2012 Mar; 6(3):588-96.
Score: 0.019
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Chu H, Fierer N, Lauber CL, Caporaso JG, Knight R, Grogan P. Soil bacterial diversity in the Arctic is not fundamentally different from that found in other biomes. Environ Microbiol. 2010 Nov; 12(11):2998-3006.
Score: 0.018
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Nemergut DR, Townsend AR, Sattin SR, Freeman KR, Fierer N, Neff JC, Bowman WD, Schadt CW, Weintraub MN, Schmidt SK. The effects of chronic nitrogen fertilization on alpine tundra soil microbial communities: implications for carbon and nitrogen cycling. Environ Microbiol. 2008 Nov; 10(11):3093-105.
Score: 0.015
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Connection Strength
The connection strength for concepts is the sum of the scores for each matching publication.
Publication scores are based on many factors, including how long ago they were written and whether the person is a first or senior author.
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