 Connection
Noah Fierer to Soil Microbiology
This is a "connection" page, showing publications Noah Fierer has written about Soil Microbiology.
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Connection Strength |
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19.368 |
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Ramoneda J, Stallard-Olivera E, Hoffert M, Winfrey CC, Stadler M, Ni?o-Garc?a JP, Fierer N. Building a genome-based understanding of bacterial pH preferences. Sci Adv. 2023 04 28; 9(17):eadf8998.
Score: 0.733
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Oliverio AM, Bissett A, McGuire K, Saltonstall K, Turner BL, Fierer N. The Role of Phosphorus Limitation in Shaping Soil Bacterial Communities and Their Metabolic Capabilities. mBio. 2020 10 27; 11(5).
Score: 0.616
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Oliverio AM, Geisen S, Delgado-Baquerizo M, Maestre FT, Turner BL, Fierer N. The global-scale distributions of soil protists and their contributions to belowground systems. Sci Adv. 2020 01; 6(4):eaax8787.
Score: 0.584
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Carini P, Delgado-Baquerizo M, Hinckley ES, Holland-Moritz H, Brewer TE, Rue G, Vanderburgh C, McKnight D, Fierer N. Effects of Spatial Variability and Relic DNA Removal on the Detection of Temporal Dynamics in Soil Microbial Communities. mBio. 2020 01 21; 11(1).
Score: 0.584
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Brewer TE, Aronson EL, Arogyaswamy K, Billings SA, Botthoff JK, Campbell AN, Dove NC, Fairbanks D, Gallery RE, Hart SC, Kaye J, King G, Logan G, Lohse KA, Maltz MR, Mayorga E, O'Neill C, Owens SM, Packman A, Pett-Ridge J, Plante AF, Richter DD, Silver WL, Yang WH, Fierer N. Ecological and Genomic Attributes of Novel Bacterial Taxa That Thrive in Subsurface Soil Horizons. mBio. 2019 10 01; 10(5).
Score: 0.572
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Walsh CM, Gebert MJ, Delgado-Baquerizo M, Maestre FT, Fierer N. A Global Survey of Mycobacterial Diversity in Soil. Appl Environ Microbiol. 2019 09 01; 85(17).
Score: 0.567
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Bradford MA, McCulley RL, Crowther TW, Oldfield EE, Wood SA, Fierer N. Cross-biome patterns in soil microbial respiration predictable from evolutionary theory on thermal adaptation. Nat Ecol Evol. 2019 01 14; 3(2):223-231.
Score: 0.544
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Leff JW, Bardgett RD, Wilkinson A, Jackson BG, Pritchard WJ, De Long JR, Oakley S, Mason KE, Ostle NJ, Johnson D, Baggs EM, Fierer N. Predicting the structure of soil communities from plant community taxonomy, phylogeny, and traits. ISME J. 2018 06; 12(7):1794-1805.
Score: 0.513
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Delgado-Baquerizo M, Oliverio AM, Brewer TE, Benavent-Gonz?lez A, Eldridge DJ, Bardgett RD, Maestre FT, Singh BK, Fierer N. A global atlas of the dominant bacteria found in soil. Science. 2018 01 19; 359(6373):320-325.
Score: 0.508
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Fierer N. Embracing the unknown: disentangling the complexities of the soil microbiome. Nat Rev Microbiol. 2017 Oct; 15(10):579-590.
Score: 0.494
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Delgado-Baquerizo M, Bissett A, Eldridge DJ, Maestre FT, He JZ, Wang JT, Hamonts K, Liu YR, Singh BK, Fierer N. Palaeoclimate explains a unique proportion of the global variation in soil bacterial communities. Nat Ecol Evol. 2017 Sep; 1(9):1339-1347.
Score: 0.493
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Oliverio AM, Bradford MA, Fierer N. Identifying the microbial taxa that consistently respond to?soil warming across time and space. Glob Chang Biol. 2017 05; 23(5):2117-2129.
Score: 0.470
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Brewer TE, Handley KM, Carini P, Gilbert JA, Fierer N. Genome reduction in an abundant and ubiquitous soil bacterium 'Candidatus Udaeobacter copiosus'. Nat Microbiol. 2016 Oct 31; 2:16198.
Score: 0.467
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Barber?n A, McGuire KL, Wolf JA, Jones FA, Wright SJ, Turner BL, Essene A, Hubbell SP, Faircloth BC, Fierer N. Relating belowground microbial composition to the taxonomic, phylogenetic, and functional trait distributions of trees in a tropical forest. Ecol Lett. 2015 Dec; 18(12):1397-405.
Score: 0.435
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Leff JW, Jones SE, Prober SM, Barber?n A, Borer ET, Firn JL, Harpole WS, Hobbie SE, Hofmockel KS, Knops JM, McCulley RL, La Pierre K, Risch AC, Seabloom EW, Sch?tz M, Steenbock C, Stevens CJ, Fierer N. Consistent responses of soil microbial communities to elevated nutrient inputs in grasslands across the globe. Proc Natl Acad Sci U S A. 2015 Sep 01; 112(35):10967-72.
Score: 0.430
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Prober SM, Leff JW, Bates ST, Borer ET, Firn J, Harpole WS, Lind EM, Seabloom EW, Adler PB, Bakker JD, Cleland EE, DeCrappeo NM, DeLorenze E, Hagenah N, Hautier Y, Hofmockel KS, Kirkman KP, Knops JM, La Pierre KJ, MacDougall AS, McCulley RL, Mitchell CE, Risch AC, Schuetz M, Stevens CJ, Williams RJ, Fierer N. Plant diversity predicts beta but not alpha diversity of soil microbes across grasslands worldwide. Ecol Lett. 2015 Jan; 18(1):85-95.
Score: 0.409
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Ramirez KS, Leff JW, Barber?n A, Bates ST, Betley J, Crowther TW, Kelly EF, Oldfield EE, Shaw EA, Steenbock C, Bradford MA, Wall DH, Fierer N. Biogeographic patterns in below-ground diversity in New York City's Central Park are similar to those observed globally. Proc Biol Sci. 2014 Nov 22; 281(1795).
Score: 0.408
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McGuire KL, D'Angelo H, Brearley FQ, Gedallovich SM, Babar N, Yang N, Gillikin CM, Gradoville R, Bateman C, Turner BL, Mansor P, Leff JW, Fierer N. Responses of soil fungi to logging and oil palm agriculture in Southeast Asian tropical forests. Microb Ecol. 2015 May; 69(4):733-47.
Score: 0.401
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Barber?n A, Ramirez KS, Leff JW, Bradford MA, Wall DH, Fierer N. Why are some microbes more ubiquitous than others? Predicting the habitat breadth of soil bacteria. Ecol Lett. 2014 Jul; 17(7):794-802.
Score: 0.392
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Neher DA, Weicht TR, Bates ST, Leff JW, Fierer N. Changes in bacterial and fungal communities across compost recipes, preparation methods, and composting times. PLoS One. 2013; 8(11):e79512.
Score: 0.381
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Fierer N, Ladau J, Clemente JC, Leff JW, Owens SM, Pollard KS, Knight R, Gilbert JA, McCulley RL. Reconstructing the microbial diversity and function of pre-agricultural tallgrass prairie soils in the United States. Science. 2013 Nov 01; 342(6158):621-4.
Score: 0.380
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Portillo MC, Leff JW, Lauber CL, Fierer N. Cell size distributions of soil bacterial and archaeal taxa. Appl Environ Microbiol. 2013 Dec; 79(24):7610-7.
Score: 0.377
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Lauber CL, Ramirez KS, Aanderud Z, Lennon J, Fierer N. Temporal variability in soil microbial communities across land-use types. ISME J. 2013 Aug; 7(8):1641-50.
Score: 0.365
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McGuire KL, Payne SG, Palmer MI, Gillikin CM, Keefe D, Kim SJ, Gedallovich SM, Discenza J, Rangamannar R, Koshner JA, Massmann AL, Orazi G, Essene A, Leff JW, Fierer N. Digging the New York City Skyline: soil fungal communities in green roofs and city parks. PLoS One. 2013; 8(3):e58020.
Score: 0.362
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Fierer N, Leff JW, Adams BJ, Nielsen UN, Bates ST, Lauber CL, Owens S, Gilbert JA, Wall DH, Caporaso JG. Cross-biome metagenomic analyses of soil microbial communities and their functional attributes. Proc Natl Acad Sci U S A. 2012 Dec 26; 109(52):21390-5.
Score: 0.357
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Fierer N, Lauber CL, Ramirez KS, Zaneveld J, Bradford MA, Knight R. Comparative metagenomic, phylogenetic and physiological analyses of soil microbial communities across nitrogen gradients. ISME J. 2012 May; 6(5):1007-17.
Score: 0.332
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Barber?n A, Bates ST, Casamayor EO, Fierer N. Using network analysis to explore co-occurrence patterns in soil microbial communities. ISME J. 2012 Feb; 6(2):343-51.
Score: 0.327
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Fierer N, McCain CM, Meir P, Zimmermann M, Rapp JM, Silman MR, Knight R. Microbes do not follow the elevational diversity patterns of plants and animals. Ecology. 2011 Apr; 92(4):797-804.
Score: 0.317
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Ramirez KS, Lauber CL, Knight R, Bradford MA, Fierer N. Consistent effects of nitrogen fertilization on soil bacterial communities in contrasting systems. Ecology. 2010 Dec; 91(12):3463-70; discussion 3503-14.
Score: 0.310
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Bates ST, Berg-Lyons D, Caporaso JG, Walters WA, Knight R, Fierer N. Examining the global distribution of dominant archaeal populations in soil. ISME J. 2011 May; 5(5):908-17.
Score: 0.309
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Rousk J, B??th E, Brookes PC, Lauber CL, Lozupone C, Caporaso JG, Knight R, Fierer N. Soil bacterial and fungal communities across a pH gradient in an arable soil. ISME J. 2010 Oct; 4(10):1340-51.
Score: 0.298
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Lauber CL, Zhou N, Gordon JI, Knight R, Fierer N. Effect of storage conditions on the assessment of bacterial community structure in soil and human-associated samples. FEMS Microbiol Lett. 2010 Jun; 307(1):80-6.
Score: 0.296
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Lauber CL, Hamady M, Knight R, Fierer N. Pyrosequencing-based assessment of soil pH as a predictor of soil bacterial community structure at the continental scale. Appl Environ Microbiol. 2009 Aug; 75(15):5111-20.
Score: 0.280
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Fierer N, Carney KM, Horner-Devine MC, Megonigal JP. The biogeography of ammonia-oxidizing bacterial communities in soil. Microb Ecol. 2009 Aug; 58(2):435-45.
Score: 0.277
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Jones RT, Robeson MS, Lauber CL, Hamady M, Knight R, Fierer N. A comprehensive survey of soil acidobacterial diversity using pyrosequencing and clone library analyses. ISME J. 2009 Apr; 3(4):442-53.
Score: 0.272
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Fierer N, Breitbart M, Nulton J, Salamon P, Lozupone C, Jones R, Robeson M, Edwards RA, Felts B, Rayhawk S, Knight R, Rohwer F, Jackson RB. Metagenomic and small-subunit rRNA analyses reveal the genetic diversity of bacteria, archaea, fungi, and viruses in soil. Appl Environ Microbiol. 2007 Nov; 73(21):7059-66.
Score: 0.248
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Craine JM, Morrow C, Fierer N. Microbial nitrogen limitation increases decomposition. Ecology. 2007 Aug; 88(8):2105-13.
Score: 0.246
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Fierer N, Bradford MA, Jackson RB. Toward an ecological classification of soil bacteria. Ecology. 2007 Jun; 88(6):1354-64.
Score: 0.243
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Fierer N, Jackson RB. The diversity and biogeography of soil bacterial communities. Proc Natl Acad Sci U S A. 2006 Jan 17; 103(3):626-31.
Score: 0.221
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Fierer N, Jackson JA, Vilgalys R, Jackson RB. Assessment of soil microbial community structure by use of taxon-specific quantitative PCR assays. Appl Environ Microbiol. 2005 Jul; 71(7):4117-20.
Score: 0.213
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Philippot L, Chenu C, Kappler A, Rillig MC, Fierer N. The interplay between microbial communities and soil properties. Nat Rev Microbiol. 2024 Apr; 22(4):226-239.
Score: 0.189
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Caro TA, McFarlin J, Jech S, Fierer N, Kopf S. Hydrogen stable isotope probing of lipids demonstrates slow rates of microbial growth in soil. Proc Natl Acad Sci U S A. 2023 04 18; 120(16):e2211625120.
Score: 0.183
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Fierer N, Schimel JP, Holden PA. Influence of drying-rewetting frequency on soil bacterial community structure. Microb Ecol. 2003 Jan; 45(1):63-71.
Score: 0.178
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Dragone NB, Henley JB, Holland-Moritz H, Diaz M, Hogg ID, Lyons WB, Wall DH, Adams BJ, Fierer N. Elevational Constraints on the Composition and Genomic Attributes of Microbial Communities in Antarctic Soils. mSystems. 2022 02 22; 7(1):e0133021.
Score: 0.168
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Lekberg Y, Arnillas CA, Borer ET, Bullington LS, Fierer N, Kennedy PG, Leff JW, Luis AD, Seabloom EW, Henning JA. Nitrogen and phosphorus fertilization consistently favor pathogenic over mutualistic fungi in grassland soils. Nat Commun. 2021 06 09; 12(1):3484.
Score: 0.161
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Walsh CM, Becker-Uncapher I, Carlson M, Fierer N. Variable influences of soil and seed-associated bacterial communities on the assembly of seedling microbiomes. ISME J. 2021 09; 15(9):2748-2762.
Score: 0.159
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Semchenko M, Leff JW, Lozano YM, Saar S, Davison J, Wilkinson A, Jackson BG, Pritchard WJ, De Long JR, Oakley S, Mason KE, Ostle NJ, Baggs EM, Johnson D, Fierer N, Bardgett RD. Fungal diversity regulates plant-soil feedbacks in temperate grassland. Sci Adv. 2018 11; 4(11):eaau4578.
Score: 0.135
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Rath KM, Fierer N, Murphy DV, Rousk J. Linking bacterial community composition to soil salinity along environmental gradients. ISME J. 2019 03; 13(3):836-846.
Score: 0.135
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Nottingham AT, Fierer N, Turner BL, Whitaker J, Ostle NJ, McNamara NP, Bardgett RD, Leff JW, Salinas N, Silman MR, Kruuk LEB, Meir P. Microbes follow Humboldt: temperature drives plant and soil microbial diversity patterns from the Amazon to the Andes. Ecology. 2018 11; 99(11):2455-2466.
Score: 0.134
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Cameron EK, Martins IS, Lavelle P, Mathieu J, Tedersoo L, Gottschall F, Guerra CA, Hines J, Patoine G, Siebert J, Winter M, Cesarz S, Delgado-Baquerizo M, Ferlian O, Fierer N, Kreft H, Lovejoy TE, Montanarella L, Orgiazzi A, Pereira HM, Phillips HRP, Settele J, Wall DH, Eisenhauer N. Global gaps in soil biodiversity data. Nat Ecol Evol. 2018 07; 2(7):1042-1043.
Score: 0.131
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Ortiz-?lvarez R, Fierer N, de Los R?os A, Casamayor EO, Barber?n A. Consistent changes in the taxonomic structure and functional attributes of bacterial communities during primary succession. ISME J. 2018 06; 12(7):1658-1667.
Score: 0.128
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Rojas X, Guo J, Leff JW, McNear DH, Fierer N, McCulley RL. Infection with a Shoot-Specific Fungal Endophyte (Epichlo?) Alters Tall Fescue Soil Microbial Communities. Microb Ecol. 2016 07; 72(1):197-206.
Score: 0.112
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Stopnisek N, Z?hlke D, Carlier A, Barber?n A, Fierer N, Becher D, Riedel K, Eberl L, Weisskopf L. Molecular mechanisms underlying the close association between soil Burkholderia and fungi. ISME J. 2016 Jan; 10(1):253-64.
Score: 0.106
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Barber?n A, Ladau J, Leff JW, Pollard KS, Menninger HL, Dunn RR, Fierer N. Continental-scale distributions of dust-associated bacteria and fungi. Proc Natl Acad Sci U S A. 2015 May 05; 112(18):5756-61.
Score: 0.105
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Treseder KK, Maltz MR, Hawkins BA, Fierer N, Stajich JE, McGuire KL. Evolutionary histories of soil fungi are reflected in their large-scale biogeography. Ecol Lett. 2014 Sep; 17(9):1086-93.
Score: 0.099
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Forsberg KJ, Patel S, Gibson MK, Lauber CL, Knight R, Fierer N, Dantas G. Bacterial phylogeny structures soil resistomes across habitats. Nature. 2014 May 29; 509(7502):612-6.
Score: 0.099
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Crowther TW, Maynard DS, Leff JW, Oldfield EE, McCulley RL, Fierer N, Bradford MA. Predicting the responsiveness of soil biodiversity to deforestation: a cross-biome study. Glob Chang Biol. 2014 Sep; 20(9):2983-94.
Score: 0.098
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Bowers RM, Clements N, Emerson JB, Wiedinmyer C, Hannigan MP, Fierer N. Seasonal variability in bacterial and fungal diversity of the near-surface atmosphere. Environ Sci Technol. 2013; 47(21):12097-106.
Score: 0.095
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Stopnisek N, Bodenhausen N, Frey B, Fierer N, Eberl L, Weisskopf L. Genus-wide acid tolerance accounts for the biogeographical distribution of soil Burkholderia populations. Environ Microbiol. 2014 Jun; 16(6):1503-12.
Score: 0.093
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McGuire KL, Allison SD, Fierer N, Treseder KK. Ectomycorrhizal-dominated boreal and tropical forests have distinct fungal communities, but analogous spatial patterns across soil horizons. PLoS One. 2013; 8(7):e68278.
Score: 0.093
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McGuire KL, Fierer N, Bateman C, Treseder KK, Turner BL. Fungal community composition in neotropical rain forests: the influence of tree diversity and precipitation. Microb Ecol. 2012 May; 63(4):804-12.
Score: 0.083
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Bowers RM, McLetchie S, Knight R, Fierer N. Spatial variability in airborne bacterial communities across land-use types and their relationship to the bacterial communities of potential source environments. ISME J. 2011 Apr; 5(4):601-12.
Score: 0.077
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Chu H, Fierer N, Lauber CL, Caporaso JG, Knight R, Grogan P. Soil bacterial diversity in the Arctic is not fundamentally different from that found in other biomes. Environ Microbiol. 2010 Nov; 12(11):2998-3006.
Score: 0.077
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Kuczynski J, Liu Z, Lozupone C, McDonald D, Fierer N, Knight R. Microbial community resemblance methods differ in their ability to detect biologically relevant patterns. Nat Methods. 2010 Oct; 7(10):813-9.
Score: 0.076
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Fierer N, Strickland MS, Liptzin D, Bradford MA, Cleveland CC. Global patterns in belowground communities. Ecol Lett. 2009 Nov; 12(11):1238-49.
Score: 0.071
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Strickland MS, Lauber C, Fierer N, Bradford MA. Testing the functional significance of microbial community composition. Ecology. 2009 Feb; 90(2):441-51.
Score: 0.068
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Nemergut DR, Townsend AR, Sattin SR, Freeman KR, Fierer N, Neff JC, Bowman WD, Schadt CW, Weintraub MN, Schmidt SK. The effects of chronic nitrogen fertilization on alpine tundra soil microbial communities: implications for carbon and nitrogen cycling. Environ Microbiol. 2008 Nov; 10(11):3093-105.
Score: 0.066
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Chen Y, Gebert MJ, Faith SA, Dunn RR, Fierer N, Barber?n A. Global Patterns and Climatic Controls of Dust-Associated Microbial Communities. Microbiol Spectr. 2021 10 31; 9(2):e0144721.
Score: 0.041
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McBride SG, Choudoir M, Fierer N, Strickland MS. Volatile organic compounds from leaf litter decomposition alter soil microbial communities and carbon dynamics. Ecology. 2020 10; 101(10):e03130.
Score: 0.038
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Allwood JS, Fierer N, Dunn RR. The Future of Environmental DNA in Forensic Science. Appl Environ Microbiol. 2020 01 07; 86(2).
Score: 0.036
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Nottingham AT, Whitaker J, Ostle NJ, Bardgett RD, McNamara NP, Fierer N, Salinas N, Ccahuana AJQ, Turner BL, Meir P. Microbial responses to warming enhance soil carbon loss following translocation across a tropical forest elevation gradient. Ecol Lett. 2019 Nov; 22(11):1889-1899.
Score: 0.036
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Bowman WD, Ayyad A, Bueno de Mesquita CP, Fierer N, Potter TS, Sternagel S. Limited ecosystem recovery from simulated chronic nitrogen deposition. Ecol Appl. 2018 10; 28(7):1762-1772.
Score: 0.033
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Nemergut DR, Costello EK, Hamady M, Lozupone C, Jiang L, Schmidt SK, Fierer N, Townsend AR, Cleveland CC, Stanish L, Knight R. Global patterns in the biogeography of bacterial taxa. Environ Microbiol. 2011 Jan; 13(1):135-144.
Score: 0.019
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Hofmockel KS, Fierer N, Colman BP, Jackson RB. Amino acid abundance and proteolytic potential in North American soils. Oecologia. 2010 Aug; 163(4):1069-78.
Score: 0.018
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Connection Strength
The connection strength for concepts is the sum of the scores for each matching publication.
Publication scores are based on many factors, including how long ago they were written and whether the person is a first or senior author.
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