 Connection
Charles Sagerstrom to Zebrafish
This is a "connection" page, showing publications Charles Sagerstrom has written about Zebrafish.
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Connection Strength |
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6.471 |
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Kim YI, O'Rourke R, Sagerstr?m CG. scMultiome analysis identifies embryonic hindbrain progenitors with mixed rhombomere identities. Elife. 2023 Nov 10; 12.
Score: 0.631
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Stanney W, Ladam F, Donaldson IJ, Parsons TJ, Maehr R, Bobola N, Sagerstr?m CG. Combinatorial action of NF-Y and TALE at embryonic enhancers defines distinct gene expression programs during zygotic genome activation in zebrafish. Dev Biol. 2020 03 15; 459(2):161-180.
Score: 0.482
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Ladam F, Stanney W, Donaldson IJ, Yildiz O, Bobola N, Sagerstr?m CG. TALE factors use two distinct functional modes to control an essential zebrafish gene expression program. Elife. 2018 06 18; 7.
Score: 0.434
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Maurer JM, Sagerstr?m CG. A parental requirement for dual-specificity phosphatase 6 in zebrafish. BMC Dev Biol. 2018 03 15; 18(1):6.
Score: 0.427
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Ghosh P, Sagerstr?m CG. Developing roles for Hox proteins in hindbrain gene regulatory networks. Int J Dev Biol. 2018; 62(11-12):767-774.
Score: 0.421
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Weicksel SE, Gupta A, Zannino DA, Wolfe SA, Sagerstr?m CG. Targeted germ line disruptions reveal general and species-specific roles for paralog group 1 hox genes in zebrafish. BMC Dev Biol. 2014 Jun 05; 14:25.
Score: 0.328
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Zannino DA, Downes GB, Sagerstr?m CG. prdm12b specifies the p1 progenitor domain and reveals a role for V1 interneurons in swim movements. Dev Biol. 2014 Jun 15; 390(2):247-60.
Score: 0.323
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Ladam F, Sagerstr?m CG. Functional analysis of hox genes in zebrafish. Methods Mol Biol. 2014; 1196:133-44.
Score: 0.319
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Weicksel SE, Xu J, Sagerstr?m CG. Dynamic nucleosome organization at hox promoters during zebrafish embryogenesis. PLoS One. 2013; 8(5):e63175.
Score: 0.305
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Alexa K, Choe SK, Hirsch N, Etheridge L, Laver E, Sagerstr?m CG. Maternal and zygotic aldh1a2 activity is required for pancreas development in zebrafish. PLoS One. 2009 Dec 11; 4(12):e8261.
Score: 0.241
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Choe SK, Lu P, Nakamura M, Lee J, Sagerstr?m CG. Meis cofactors control HDAC and CBP accessibility at Hox-regulated promoters during zebrafish embryogenesis. Dev Cell. 2009 Oct; 17(4):561-7.
Score: 0.237
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Choe SK, Hirsch N, Zhang X, Sagerstr?m CG. hnf1b genes in zebrafish hindbrain development. Zebrafish. 2008 Sep; 5(3):179-87.
Score: 0.220
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diIorio P, Alexa K, Choe SK, Etheridge L, Sagerstr?m CG. TALE-family homeodomain proteins regulate endodermal sonic hedgehog expression and pattern the anterior endoderm. Dev Biol. 2007 Apr 01; 304(1):221-31.
Score: 0.196
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Runko AP, Sagerstr?m CG. Nlz belongs to a family of zinc-finger-containing repressors and controls segmental gene expression in the zebrafish hindbrain. Dev Biol. 2003 Oct 15; 262(2):254-67.
Score: 0.157
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Bhandari S, Hong K, Miyawaki-Kuwakado A, Tomimatsu K, Kim YI, Nam IK, Sagerstr?m CG, Nakamura M, Choe SK. nudt7 gene depletion causes transcriptomic change in early development of zebrafish. J Biochem. 2022 Dec 27; 173(1):53-63.
Score: 0.149
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Lane ME, Runko AP, Roy NM, Sagerstr?m CG. Dynamic expression and regulation by Fgf8 and Pou2 of the zebrafish LIM-only gene, lmo4. Gene Expr Patterns. 2002 Dec; 2(3-4):207-11.
Score: 0.148
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Etheridge L, Diiorio P, Sagerstr?m CG. A zebrafish unc-45-related gene expressed during muscle development. Dev Dyn. 2002 Aug; 224(4):457-60.
Score: 0.144
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Sagerstr?m CG, Kao BA, Lane ME, Sive H. Isolation and characterization of posteriorly restricted genes in the zebrafish gastrula. Dev Dyn. 2001 Apr; 220(4):402-8.
Score: 0.132
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Vlachakis N, Ellstrom DR, Sagerstr?m CG. A novel pbx family member expressed during early zebrafish embryogenesis forms trimeric complexes with Meis3 and Hoxb1b. Dev Dyn. 2000 Jan; 217(1):109-19.
Score: 0.121
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Yildiz O, Downes GB, Sagerstr?m CG. Zebrafish prdm12b acts independently of nkx6.1 repression to promote eng1b expression in the neural tube p1 domain. Neural Dev. 2019 02 27; 14(1):5.
Score: 0.114
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Grinblat Y, Lane ME, Sagerstr?m C, Sive H. Analysis of zebrafish development using explant culture assays. Methods Cell Biol. 1999; 59:127-56.
Score: 0.113
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Ghosh P, Maurer JM, Sagerstr?m CG. Analysis of novel caudal hindbrain genes reveals different regulatory logic for gene expression in rhombomere 4 versus 5/6 in embryonic zebrafish. Neural Dev. 2018 06 26; 13(1):13.
Score: 0.109
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Sagerstr?m CG, Grinblat Y, Sive H. Anteroposterior patterning in the zebrafish, Danio rerio: an explant assay reveals inductive and suppressive cell interactions. Development. 1996 06; 122(6):1873-83.
Score: 0.094
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Choe SK, Ladam F, Sagerstr?m CG. TALE factors poise promoters for activation by Hox proteins. Dev Cell. 2014 Jan 27; 28(2):203-11.
Score: 0.080
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Choe SK, Nakamura M, Ladam F, Etheridge L, Sagerstr?m CG. A Gal4/UAS system for conditional transgene expression in rhombomere 4 of the zebrafish hindbrain. Dev Dyn. 2012 Jun; 241(6):1125-32.
Score: 0.071
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Zannino DA, Sagerstr?m CG, Appel B. olig2-Expressing hindbrain cells are required for migrating facial motor neurons. Dev Dyn. 2012 Feb; 241(2):315-26.
Score: 0.070
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Choe SK, Zhang X, Hirsch N, Straubhaar J, Sagerstr?m CG. A screen for hoxb1-regulated genes identifies ppp1r14al as a regulator of the rhombomere 4 Fgf-signaling center. Dev Biol. 2011 Oct 15; 358(2):356-67.
Score: 0.067
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Nakamura M, Choe SK, Runko AP, Gardner PD, Sagerstr?m CG. Nlz1/Znf703 acts as a repressor of transcription. BMC Dev Biol. 2008 Nov 12; 8:108.
Score: 0.056
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Choe SK, Sagerstr?m CG. Variable Meis-dependence among paralog group-1 Hox proteins. Biochem Biophys Res Commun. 2005 Jun 17; 331(4):1384-91.
Score: 0.044
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Sagerstr?m CG, Gammill LS, Veale R, Sive H. Specification of the enveloping layer and lack of autoneuralization in zebrafish embryonic explants. Dev Dyn. 2005 Jan; 232(1):85-97.
Score: 0.043
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Choe SK, Sagerstr?m CG. Paralog group 1 hox genes regulate rhombomere 5/6 expression of vhnf1, a repressor of rostral hindbrain fates, in a meis-dependent manner. Dev Biol. 2004 Jul 15; 271(2):350-61.
Score: 0.041
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Roy NM, Sagerstr?m CG. An early Fgf signal required for gene expression in the zebrafish hindbrain primordium. Brain Res Dev Brain Res. 2004 Jan 31; 148(1):27-42.
Score: 0.040
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Choe SK, Vlachakis N, Sagerstr?m CG. Meis family proteins are required for hindbrain development in the zebrafish. Development. 2002 Feb; 129(3):585-95.
Score: 0.035
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Vlachakis N, Choe SK, Sagerstr?m CG. Meis3 synergizes with Pbx4 and Hoxb1b in promoting hindbrain fates in the zebrafish. Development. 2001 Apr; 128(8):1299-312.
Score: 0.033
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Bridoux L, Zarrineh P, Mallen J, Phuycharoen M, Latorre V, Ladam F, Losa M, Baker SM, Sagerstrom C, Mace KA, Rattray M, Bobola N. HOX paralogs selectively convert binding of ubiquitous transcription factors into tissue-specific patterns of enhancer activation. PLoS Genet. 2020 12; 16(12):e1009162.
Score: 0.032
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Mallappa C, Nasipak BT, Etheridge L, Androphy EJ, Jones SN, Sagerstr?m CG, Ohkawa Y, Imbalzano AN. Myogenic microRNA expression requires ATP-dependent chromatin remodeling enzyme function. Mol Cell Biol. 2010 Jul; 30(13):3176-86.
Score: 0.015
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Connection Strength
The connection strength for concepts is the sum of the scores for each matching publication.
Publication scores are based on many factors, including how long ago they were written and whether the person is a first or senior author.
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