 Synteny
"Synteny" is a descriptor in the National Library of Medicine's controlled vocabulary thesaurus,
MeSH (Medical Subject Headings). Descriptors are arranged in a hierarchical structure,
which enables searching at various levels of specificity.
The presence of two or more genetic loci on the same chromosome. Extensions of this original definition refer to the similarity in content and organization between chromosomes, of different species for example.
| Descriptor ID |
D026801
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| MeSH Number(s) |
G02.111.810.550.830 G05.810.550.830
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| Concept/Terms |
Synteny- Synteny
- Syntenies
- Syntenic Homology
- Homologies, Syntenic
- Homology, Syntenic
- Syntenic Homologies
Conserved Synteny- Conserved Synteny
- Conserved Syntenies
- Syntenies, Conserved
- Synteny, Conserved
- Syntenic Conservation
- Conservation, Syntenic
- Conservations, Syntenic
- Syntenic Conservations
Colinearity, Chromosomal- Colinearity, Chromosomal
- Chromosomal Colinearities
- Colinearities, Chromosomal
- Chromosomal Colinearity
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Below are MeSH descriptors whose meaning is more general than "Synteny".
Below are MeSH descriptors whose meaning is more specific than "Synteny".
This graph shows the total number of publications written about "Synteny" by people in this website by year, and whether "Synteny" was a major or minor topic of these publications.
To see the data from this visualization as text, click here.
| Year | Major Topic | Minor Topic | Total |
|---|
| 2004 | 0 | 1 | 1 | | 2006 | 0 | 1 | 1 | | 2007 | 0 | 2 | 2 | | 2008 | 0 | 1 | 1 | | 2011 | 0 | 1 | 1 | | 2014 | 0 | 1 | 1 | | 2015 | 0 | 2 | 2 | | 2016 | 0 | 1 | 1 | | 2018 | 0 | 3 | 3 | | 2020 | 0 | 1 | 1 | | 2021 | 0 | 1 | 1 | | 2022 | 0 | 1 | 1 | | 2023 | 0 | 1 | 1 |
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Below are the most recent publications written about "Synteny" by people in Profiles.
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Hoffman JR, Karol KG, Ohmura Y, Pogoda CS, Keepers KG, McMullin RT, Lendemer JC. Mitochondrial genomes in the iconic reindeer lichens: Architecture, variation, and synteny across multiple evolutionary scales. Mycologia. 2023 Mar-Apr; 115(2):187-205.
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Lovell JT, Sreedasyam A, Schranz ME, Wilson M, Carlson JW, Harkess A, Emms D, Goodstein DM, Schmutz J. GENESPACE tracks regions of interest and gene copy number variation across multiple genomes. Elife. 2022 09 09; 11.
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Koochekian N, Ascanio A, Farleigh K, Card DC, Schield DR, Castoe TA, Jezkova T. A chromosome-level genome assembly and annotation of the desert horned lizard, Phrynosoma platyrhinos, provides insight into chromosomal rearrangements among reptiles. Gigascience. 2022 02 04; 11.
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Seixas FA, Edelman NB, Mallet J. Synteny-Based Genome Assembly for 16 Species of Heliconius Butterflies, and an Assessment of Structural Variation across the Genus. Genome Biol Evol. 2021 07 06; 13(7).
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Feng S, Stiller J, Deng Y, Armstrong J, Fang Q, Reeve AH, Xie D, Chen G, Guo C, Faircloth BC, Petersen B, Wang Z, Zhou Q, Diekhans M, Chen W, Andreu-S?nchez S, Margaryan A, Howard JT, Parent C, Pacheco G, Sinding MS, Puetz L, Cavill E, Ribeiro ?M, Eckhart L, Fjelds? J, Hosner PA, Brumfield RT, Christidis L, Bertelsen MF, Sicheritz-Ponten T, Tietze DT, Robertson BC, Song G, Borgia G, Claramunt S, Lovette IJ, Cowen SJ, Njoroge P, Dumbacher JP, Ryder OA, Fuchs J, Bunce M, Burt DW, Cracraft J, Meng G, Hackett SJ, Ryan PG, J?nsson KA, Jamieson IG, da Fonseca RR, Braun EL, Houde P, Mirarab S, Suh A, Hansson B, Ponnikas S, Sigeman H, Stervander M, Frandsen PB, van der Zwan H, van der Sluis R, Visser C, Balakrishnan CN, Clark AG, Fitzpatrick JW, Bowman R, Chen N, Cloutier A, Sackton TB, Edwards SV, Foote DJ, Shakya SB, Sheldon FH, Vignal A, Soares AER, Shapiro B, Gonz?lez-Sol?s J, Ferrer-Obiol J, Rozas J, Riutort M, Tigano A, Friesen V, Dal?n L, Urrutia AO, Sz?kely T, Liu Y, Campana MG, Corvelo A, Fleischer RC, Rutherford KM, Gemmell NJ, Dussex N, Mouritsen H, Thiele N, Delmore K, Liedvogel M, Franke A, Hoeppner MP, Krone O, Fudickar AM, Mil? B, Ketterson ED, Fidler AE, Friis G, Parody-Merino ?M, Battley PF, Cox MP, Lima NCB, Prosdocimi F, Parchman TL, Schlinger BA, Loiselle BA, Blake JG, Lim HC, Day LB, Fuxjager MJ, Baldwin MW, Braun MJ, Wirthlin M, Dikow RB, Ryder TB, Camenisch G, Keller LF, DaCosta JM, Hauber ME, Louder MIM, Witt CC, McGuire JA, Mudge J, Megna LC, Carling MD, Wang B, Taylor SA, Del-Rio G, Aleixo A, Vasconcelos ATR, Mello CV, Weir JT, Haussler D, Li Q, Yang H, Wang J, Lei F, Rahbek C, Gilbert MTP, Graves GR, Jarvis ED, Paten B, Zhang G. Dense sampling of bird diversity increases power of comparative genomics. Nature. 2020 11; 587(7833):252-257.
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Lazar NH, Nevonen KA, O'Connell B, McCann C, O'Neill RJ, Green RE, Meyer TJ, Okhovat M, Carbone L. Epigenetic maintenance of topological domains in the highly rearranged gibbon genome. Genome Res. 2018 07; 28(7):983-997.
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Holt C, Campbell M, Keays DA, Edelman N, Kapusta A, Maclary E, T Domyan E, Suh A, Warren WC, Yandell M, Gilbert MTP, Shapiro MD. Improved Genome Assembly and Annotation for the Rock Pigeon (Columba livia). G3 (Bethesda). 2018 05 04; 8(5):1391-1398.
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Pogoda CS, Keepers KG, Lendemer JC, Kane NC, Tripp EA. Reductions in complexity of mitochondrial genomes in lichen-forming fungi shed light on genome architecture of obligate symbioses. Mol Ecol. 2018 03; 27(5):1155-1169.
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Vera JM, Dowell RD. Survey of cryptic unstable transcripts in yeast. BMC Genomics. 2016 Apr 26; 17:305.
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Larremore DB, Sundararaman SA, Liu W, Proto WR, Clauset A, Loy DE, Speede S, Plenderleith LJ, Sharp PM, Hahn BH, Rayner JC, Buckee CO. Ape parasite origins of human malaria virulence genes. Nat Commun. 2015 Oct 12; 6:8368.
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