 Connection
Carlos Catalano to DNA, Viral
This is a "connection" page, showing publications Carlos Catalano has written about DNA, Viral.
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Connection Strength |
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5.319 |
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Ortiz D, delToro D, Ordyan M, Pajak J, Sippy J, Catala A, Oh CS, Vu A, Arya G, Feiss M, Smith DE, Catalano CE. Evidence that a catalytic glutamate and an 'Arginine Toggle'?act in concert to mediate ATP hydrolysis and mechanochemical coupling in a viral DNA packaging motor. Nucleic Acids Res. 2019 02 20; 47(3):1404-1415.
Score: 0.539
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Lambert S, Yang Q, De Angeles R, Chang JR, Ortega M, Davis C, Catalano CE. Molecular Dissection of the Forces Responsible for Viral Capsid Assembly and Stabilization by Decoration Proteins. Biochemistry. 2017 02 07; 56(5):767-778.
Score: 0.467
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Yang TC, Ortiz D, Nosaka L, Lander GC, Catalano CE. Thermodynamic Interrogation of the Assembly of a Viral Genome Packaging Motor Complex. Biophys J. 2015 Oct 20; 109(8):1663-75.
Score: 0.428
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Andrews BT, Catalano CE. Strong subunit coordination drives a powerful viral DNA packaging motor. Proc Natl Acad Sci U S A. 2013 Apr 09; 110(15):5909-14.
Score: 0.358
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Chang JR, Andrews BT, Catalano CE. Energy-independent helicase activity of a viral genome packaging motor. Biochemistry. 2012 Jan 10; 51(1):391-400.
Score: 0.329
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Maluf NK, Gaussier H, Bogner E, Feiss M, Catalano CE. Assembly of bacteriophage lambda terminase into a viral DNA maturation and packaging machine. Biochemistry. 2006 Dec 26; 45(51):15259-68.
Score: 0.231
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Ortega ME, Catalano CE. Bacteriophage lambda gpNu1 and Escherichia coli IHF proteins cooperatively bind and bend viral DNA: implications for the assembly of a genome-packaging motor. Biochemistry. 2006 Apr 25; 45(16):5180-9.
Score: 0.222
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Rawson B, Yang Q, Catalano CE, Smith DE. Single-molecule measurements of bacteriophage lambda DNA packaging using purified terminase motor proteins and E. coli integration host factor. Sci Rep. 2025 Feb 27; 15(1):7093.
Score: 0.205
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Yang Q, Catalano CE. A minimal kinetic model for a viral DNA packaging machine. Biochemistry. 2004 Jan 20; 43(2):289-99.
Score: 0.189
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de Beer T, Fang J, Ortega M, Yang Q, Maes L, Duffy C, Berton N, Sippy J, Overduin M, Feiss M, Catalano CE. Insights into specific DNA recognition during the assembly of a viral genome packaging machine. Mol Cell. 2002 May; 9(5):981-91.
Score: 0.168
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Catalano CE, Morais MC. Viral genome packaging machines: Structure and enzymology. Enzymes. 2021; 50:369-413.
Score: 0.163
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Yang Q, Catalano CE. ATP serves as a nucleotide switch coupling the genome maturation and packaging motor complexes of a virus assembly machine. Nucleic Acids Res. 2020 05 21; 48(9):5006-5015.
Score: 0.147
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Catalano CE. The terminase enzyme from bacteriophage lambda: a DNA-packaging machine. Cell Mol Life Sci. 2000 Jan 20; 57(1):128-48.
Score: 0.144
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delToro D, Ortiz D, Ordyan M, Pajak J, Sippy J, Catala A, Oh CS, Vu A, Arya G, Smith DE, Catalano CE, Feiss M. Functional Dissection of a Viral DNA?Packaging Machine's Walker B?Motif. J Mol Biol. 2019 11 08; 431(22):4455-4474.
Score: 0.140
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Yang Q, de Beer T, Woods L, Meyer JD, Manning MC, Overduin M, Catalano CE. Cloning, expression, and characterization of a DNA binding domain of gpNu1, a phage lambda DNA packaging protein. Biochemistry. 1999 Jan 05; 38(1):465-77.
Score: 0.134
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Yang TC, Ortiz D, Yang Q, De Angelis RW, Sanyal SJ, Catalano CE. Physical and Functional Characterization of a Viral Genome Maturation Complex. Biophys J. 2017 Apr 25; 112(8):1551-1560.
Score: 0.119
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Yang Q, Hanagan A, Catalano CE. Assembly of a nucleoprotein complex required for DNA packaging by bacteriophage lambda. Biochemistry. 1997 Mar 11; 36(10):2744-52.
Score: 0.118
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delToro D, Ortiz D, Ordyan M, Sippy J, Oh CS, Keller N, Feiss M, Catalano CE, Smith DE. Walker-A Motif Acts to Coordinate ATP Hydrolysis with Motor Output in Viral DNA Packaging. J Mol Biol. 2016 07 03; 428(13):2709-29.
Score: 0.111
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Catalano CE, Tomka MA. Role of gpFI protein in DNA packaging by bacteriophage lambda. Biochemistry. 1995 Aug 08; 34(31):10036-42.
Score: 0.105
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Catalano CE, Cue D, Feiss M. Virus DNA packaging: the strategy used by phage lambda. Mol Microbiol. 1995 Jun; 16(6):1075-86.
Score: 0.104
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Sanyal SJ, Yang TC, Catalano CE. Integration host factor assembly at the cohesive end site of the bacteriophage lambda genome: implications for viral DNA packaging and bacterial gene regulation. Biochemistry. 2014 Dec 09; 53(48):7459-70.
Score: 0.100
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Chang JR, Song EH, Nakatani-Webster E, Monkkonen L, Ratner DM, Catalano CE. Phage lambda capsids as tunable display nanoparticles. Biomacromolecules. 2014 Dec 08; 15(12):4410-9.
Score: 0.100
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Tomka MA, Catalano CE. Physical and kinetic characterization of the DNA packaging enzyme from bacteriophage lambda. J Biol Chem. 1993 Feb 15; 268(5):3056-65.
Score: 0.089
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Medina E, Nakatani E, Kruse S, Catalano CE. Thermodynamic characterization of viral procapsid expansion into a functional capsid shell. J Mol Biol. 2012 May 04; 418(3-4):167-80.
Score: 0.083
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Tsay JM, Sippy J, DelToro D, Andrews BT, Draper B, Rao V, Catalano CE, Feiss M, Smith DE. Mutations altering a structurally conserved loop-helix-loop region of a viral packaging motor change DNA translocation velocity and processivity. J Biol Chem. 2010 Jul 30; 285(31):24282-9.
Score: 0.074
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Yang Q, Maluf NK, Catalano CE. Packaging of a unit-length viral genome: the role of nucleotides and the gpD decoration protein in stable nucleocapsid assembly in bacteriophage lambda. J Mol Biol. 2008 Nov 28; 383(5):1037-48.
Score: 0.065
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Ortega ME, Gaussier H, Catalano CE. The DNA maturation domain of gpA, the DNA packaging motor protein of bacteriophage lambda, contains an ATPase site associated with endonuclease activity. J Mol Biol. 2007 Nov 02; 373(4):851-65.
Score: 0.061
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Gaussier H, Ortega ME, Maluf NK, Catalano CE. Nucleotides regulate the conformational state of the small terminase subunit from bacteriophage lambda: implications for the assembly of a viral genome-packaging motor. Biochemistry. 2005 Jul 19; 44(28):9645-56.
Score: 0.053
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Maluf NK, Yang Q, Catalano CE. Self-association properties of the bacteriophage lambda terminase holoenzyme: implications for the DNA packaging motor. J Mol Biol. 2005 Apr 01; 347(3):523-42.
Score: 0.051
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Prokhorov NS, Davis CR, Maruthi K, Yang Q, Sherman MB, Woodson M, White MA, Miller LM, Jarrold MF, Catalano CE, Morais MC. Biophysical and structural characterization of a multifunctional viral genome packaging motor. Nucleic Acids Res. 2024 Jan 25; 52(2):831-843.
Score: 0.047
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Yang Q, Catalano CE. Biochemical characterization of bacteriophage lambda genome packaging in vitro. Virology. 2003 Jan 20; 305(2):276-87.
Score: 0.044
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Hang JQ, Catalano CE, Feiss M. The functional asymmetry of cosN, the nicking site for bacteriophage lambda DNA packaging, is dependent on the terminase binding site, cosB. Biochemistry. 2001 Nov 06; 40(44):13370-7.
Score: 0.041
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Woods L, Catalano CE. Kinetic characterization of the GTPase activity of phage lambda terminase: evidence for communication between the two "NTPase" catalytic sites of the enzyme. Biochemistry. 1999 Nov 02; 38(44):14624-30.
Score: 0.035
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Hang Q, Woods L, Feiss M, Catalano CE. Cloning, expression, and biochemical characterization of hexahistidine-tagged terminase proteins. J Biol Chem. 1999 May 28; 274(22):15305-14.
Score: 0.034
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Nurmemmedov E, Castelnovo M, Catalano CE, Evilevitch A. Biophysics of viral infectivity: matching genome length with capsid size. Q Rev Biophys. 2007 Nov; 40(4):327-56.
Score: 0.015
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Cai ZH, Hwang Y, Cue D, Catalano C, Feiss M. Mutations in Nu1, the gene encoding the small subunit of bacteriophage lambda terminase, suppress the postcleavage DNA packaging defect of cosB mutations. J Bacteriol. 1997 Apr; 179(8):2479-85.
Score: 0.007
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Connection Strength
The connection strength for concepts is the sum of the scores for each matching publication.
Publication scores are based on many factors, including how long ago they were written and whether the person is a first or senior author.
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