University of Colorado Denver - Anschutz Medical Campus
Styler WF, Bethard S, Finan S, Palmer M, Pradhan S, de Groen PC, Erickson B, Miller T, Lin C, Savova G, Pustejovsky J
Transactions of the Association for Computational Linguistics
Styler WF, Bethard S, Finan S, Palmer M, Pradhan S, de Groen PC, Erickson B, Miller T, Lin C, Savova G, Pustejovsky J. Temporal Annotation in the Clinical Domain. Trans Assoc Comput Linguist. 2014 Apr; 2:143-154.
Temporal Annotation in the Clinical Domain.
Zimmerman KN, Pustejovsky JE, Ledford JR, Barton EE, Severini KE, Lloyd BP
Zimmerman KN, Pustejovsky JE, Ledford JR, Barton EE, Severini KE, Lloyd BP. Single-case synthesis tools II: Comparing quantitative outcome measures. Res Dev Disabil. 2018 Aug; 79:65-76.
Single-case synthesis tools II: Comparing quantitative outcome measures.
Hedges LV, Pustejovsky JE, Shadish WR. A standardized mean difference effect size for single case designs. Res Synth Methods. 2012 Sep; 3(3):224-39.
A standardized mean difference effect size for single case designs.
Merluzzi TV, Pustejovsky JE, Philip EJ, Sohl SJ, Berendsen M, Salsman JM
Merluzzi TV, Pustejovsky JE, Philip EJ, Sohl SJ, Berendsen M, Salsman JM. Interventions to enhance self-efficacy in cancer patients: A meta-analysis of randomized controlled trials. Psychooncology. 2019 09; 28(9):1781-1790.
Interventions to enhance self-efficacy in cancer patients: A meta-analysis of randomized controlled trials.
Holderness E, Atwood B, Verhagen M, Shinn A, Cawkwell P, Pustejovsky J, Hall MH
Holderness E, Atwood B, Verhagen M, Shinn A, Cawkwell P, Pustejovsky J, Hall MH. Annotation of Trauma-related Linguistic Features in Psychiatric Electronic Health Records for Machine Learning Applications. Res Sq. 2023 Mar 28.
Annotation of Trauma-related Linguistic Features in Psychiatric Electronic Health Records for Machine Learning Applications.
Vembye MH, Pustejovsky JE, Pigott TD. Conducting power analysis for meta-analysis with dependent effect sizes: Common guidelines and an introduction to the POMADE R package. Res Synth Methods. 2024 Nov; 15(6):1214-1230.
Conducting power analysis for meta-analysis with dependent effect sizes: Common guidelines and an introduction to the POMADE R package.
Pustejovsky JE, Swan DM. Four Methods for Analyzing Partial Interval Recording Data, with Application to Single-Case Research. Multivariate Behav Res. 2015; 50(3):365-80.
Four Methods for Analyzing Partial Interval Recording Data, with Application to Single-Case Research.
Winters KL, Jasso J, Pustejovsky JE, Byrd CT
Journal of speech, language, and hearing research : JSLHR
Winters KL, Jasso J, Pustejovsky JE, Byrd CT. Investigating Narrative Performance in Children With Developmental Language Disorder: A Systematic Review and Meta-Analysis. J Speech Lang Hear Res. 2022 Oct 17; 65(10):3908-3929.
Investigating Narrative Performance in Children With Developmental Language Disorder: A Systematic Review and Meta-Analysis.
Austin CR, Vaughn S, Clemens NH, Pustejovsky JE, Boucher AN
Scientific studies of reading : the official journal of the Society for the Scientific Study of Reading
Austin CR, Vaughn S, Clemens NH, Pustejovsky JE, Boucher AN. The Relative Effects of Instruction Linking Word Reading and Word Meaning Compared to Word Reading Instruction Alone on the Accuracy, Fluency, and Word Meaning Knowledge of 4th-5th Grade Students With Dyslexia. Sci Stud Read. 2022; 26(3):204-222.
The Relative Effects of Instruction Linking Word Reading and Word Meaning Compared to Word Reading Instruction Alone on the Accuracy, Fluency, and Word Meaning Knowledge of 4th-5th Grade Students With Dyslexia.
Chen M, Pustejovsky JE, Klingbeil DA, Van Norman ER
Chen M, Pustejovsky JE, Klingbeil DA, Van Norman ER. Between-case standardized mean differences: Flexible methods for single-case designs. J Sch Psychol. 2023 06; 98:16-38.
Between-case standardized mean differences: Flexible methods for single-case designs.
Kazeminejad G, Palmer M, Brown SW, Pustejovsky J
Kazeminejad G, Palmer M, Brown SW, Pustejovsky J. Componential Analysis of English Verbs. Front Artif Intell. 2022; 5:780385.
Pustejovsky JE, Rodgers MA. Testing for funnel plot asymmetry of standardized mean differences. Res Synth Methods. 2019 Mar; 10(1):57-71.
Testing for funnel plot asymmetry of standardized mean differences.
Krishnaswamy N, Pustejovsky J. Affordance embeddings for situated language understanding. Front Artif Intell. 2022; 5:774752.
Affordance embeddings for situated language understanding.
Salsman JM, Pustejovsky JE, Park CL, Sherman AC, Merluzzi TV, Danhauer SC, Jim HS, Fitchett G
Salsman JM, Pustejovsky JE, Park CL, Sherman AC, Merluzzi TV, Danhauer SC, Jim HS, Fitchett G. Reply to the association between religion/spirituality and mental health in cancer. Cancer. 2016 08 01; 122(15):2441-2.
Reply to the association between religion/spirituality and mental health in cancer.
Oved I, Krishnaswamy N, Pustejovsky J, Hartshorne JK
Oved I, Krishnaswamy N, Pustejovsky J, Hartshorne JK. Neither neural networks nor the language-of-thought alone make a complete game. Behav Brain Sci. 2023 09 28; 46:e285.
Neither neural networks nor the language-of-thought alone make a complete game.
Salsman JM, Pustejovsky JE, Schueller SM, Hernandez R, Berendsen M, McLouth LES, Moskowitz JT
Journal of cancer survivorship : research and practice
Salsman JM, Pustejovsky JE, Schueller SM, Hernandez R, Berendsen M, McLouth LES, Moskowitz JT. Psychosocial interventions for cancer survivors: A meta-analysis of effects on positive affect. J Cancer Surviv. 2019 Dec; 13(6):943-955.
Psychosocial interventions for cancer survivors: A meta-analysis of effects on positive affect.
Tu J, Rim K, Ye B, Lai K, Pustejovsky J. Dense Paraphrasing for multimodal dialogue interpretation. Front Artif Intell. 2024; 7:1479905.
Dense Paraphrasing for multimodal dialogue interpretation.
Prevention science : the official journal of the Society for Prevention Research
Pustejovsky JE, Tipton E. Meta-analysis with Robust Variance Estimation: Expanding the Range of Working Models. Prev Sci. 2022 04; 23(3):425-438.
Meta-analysis with Robust Variance Estimation: Expanding the Range of Working Models.
Chen M, Pustejovsky JE. Multilevel meta-analysis of single-case experimental designs using robust variance estimation. Psychol Methods. 2024 Jun; 29(3):537-560.
Multilevel meta-analysis of single-case experimental designs using robust variance estimation.
Pustejovsky JE. Procedural sensitivities of effect sizes for single-case designs with directly observed behavioral outcome measures. Psychol Methods. 2019 Apr; 24(2):217-235.
Procedural sensitivities of effect sizes for single-case designs with directly observed behavioral outcome measures.
Salsman JM, Pustejovsky JE, Jim HS, Munoz AR, Merluzzi TV, George L, Park CL, Danhauer SC, Sherman AC, Snyder MA, Fitchett G
Salsman JM, Pustejovsky JE, Jim HS, Munoz AR, Merluzzi TV, George L, Park CL, Danhauer SC, Sherman AC, Snyder MA, Fitchett G. A meta-analytic approach to examining the correlation between religion/spirituality and mental health in cancer. Cancer. 2015 Nov 01; 121(21):3769-78.
A meta-analytic approach to examining the correlation between religion/spirituality and mental health in cancer.
Chen M, Pustejovsky JE. Adapting methods for correcting selective reporting bias in meta-analysis of dependent effect sizes. Psychol Methods. 2025 Jul 10.
Adapting methods for correcting selective reporting bias in meta-analysis of dependent effect sizes.
Ganz JB, Pustejovsky JE, Reichle J, Vannest KJ, Foster M, Pierson LM, Wattanawongwan S, Bernal AJ, Chen M, Haas AN, Liao CY, Sallese MR, Skov R, Smith SD
Augmentative and alternative communication (Baltimore, Md. : 1985)
Ganz JB, Pustejovsky JE, Reichle J, Vannest KJ, Foster M, Pierson LM, Wattanawongwan S, Bernal AJ, Chen M, Haas AN, Liao CY, Sallese MR, Skov R, Smith SD. Participant characteristics predicting communication outcomes in AAC implementation for individuals with ASD and IDD: a systematic review and meta-analysis. Augment Altern Commun. 2023 03; 39(1):7-22.
Participant characteristics predicting communication outcomes in AAC implementation for individuals with ASD and IDD: a systematic review and meta-analysis.
Grekov P, Pustejovsky JE, Klingbeil DA. Flexible distributional models for meta-analysis of reading fluency outcomes from single-case designs: An examination using Bayesian methods. J Sch Psychol. 2025 06; 110:101429.
Flexible distributional models for meta-analysis of reading fluency outcomes from single-case designs: An examination using Bayesian methods.
Taylor RC, Sanfilippo A, McDermott JE, Baddeley B, Riensche R, Jensen R, Verhagen M, Pustejovsky J
International journal of computational biology and drug design
Taylor RC, Sanfilippo A, McDermott JE, Baddeley B, Riensche R, Jensen R, Verhagen M, Pustejovsky J. Enriching regulatory networks by bootstrap learning using optimised GO-based gene similarity and gene links mined from PubMed abstracts. Int J Comput Biol Drug Des. 2011; 4(1):56-82.
Enriching regulatory networks by bootstrap learning using optimised GO-based gene similarity and gene links mined from PubMed abstracts.
Rodgers MA, Pustejovsky JE. Evaluating meta-analytic methods to detect selective reporting in the presence of dependent effect sizes. Psychol Methods. 2021 Apr; 26(2):141-160.
Evaluating meta-analytic methods to detect selective reporting in the presence of dependent effect sizes.
Reichle J, Pustejovsky JE, Vannest KJ, Foster M, Pierson LM, Wattanawongwan S, Chen M, Fuller MC, Haas AN, Bhat BH, Sallese MR, Smith SD, Yllades V, Rodriguez D, Yoro A, Ganz JB
American journal of speech-language pathology
Reichle J, Pustejovsky JE, Vannest KJ, Foster M, Pierson LM, Wattanawongwan S, Chen M, Fuller MC, Haas AN, Bhat BH, Sallese MR, Smith SD, Yllades V, Rodriguez D, Yoro A, Ganz JB. Systematic Review of Variables Related to Instruction in Augmentative and Alternative Communication Implementation: Group and Single-Case Design. Am J Speech Lang Pathol. 2023 07 10; 32(4):1734-1757.
Systematic Review of Variables Related to Instruction in Augmentative and Alternative Communication Implementation: Group and Single-Case Design.
Zimmerman KN, Ledford JR, Severini KE, Pustejovsky JE, Barton EE, Lloyd BP
Zimmerman KN, Ledford JR, Severini KE, Pustejovsky JE, Barton EE, Lloyd BP. Single-case synthesis tools I: Comparing tools to evaluate SCD quality and rigor. Res Dev Disabil. 2018 Aug; 79:19-32.
Single-case synthesis tools I: Comparing tools to evaluate SCD quality and rigor.
Hedges LV, Pustejovsky JE, Shadish WR. A standardized mean difference effect size for multiple baseline designs across individuals. Res Synth Methods. 2013 Dec; 4(4):324-41.
A standardized mean difference effect size for multiple baseline designs across individuals.
Shadish WR, Hedges LV, Pustejovsky JE, Boyajian JG, Sullivan KJ, Andrade A, Barrientos JL
Shadish WR, Hedges LV, Pustejovsky JE, Boyajian JG, Sullivan KJ, Andrade A, Barrientos JL. A d-statistic for single-case designs that is equivalent to the usual between-groups d-statistic. Neuropsychol Rehabil. 2014; 24(3-4):528-53.
A d-statistic for single-case designs that is equivalent to the usual between-groups d-statistic.
Pustejovsky JE. Measurement-comparable effect sizes for single-case studies of free-operant behavior. Psychol Methods. 2015 Sep; 20(3):342-59.
Measurement-comparable effect sizes for single-case studies of free-operant behavior.
Pustejovsky JE. Using response ratios for meta-analyzing single-case designs with behavioral outcomes. J Sch Psychol. 2018 06; 68:99-112.
Using response ratios for meta-analyzing single-case designs with behavioral outcomes.
Tipton E, Pustejovsky JE, Ahmadi H. A history of meta-regression: Technical, conceptual, and practical developments between 1974 and 2018. Res Synth Methods. 2019 Jun; 10(2):161-179.
A history of meta-regression: Technical, conceptual, and practical developments between 1974 and 2018.
Swan DM, Pustejovsky JE. A Gradual Effects Model for Single-Case Designs. Multivariate Behav Res. 2018 Jul-Aug; 53(4):574-593.
A Gradual Effects Model for Single-Case Designs.
Sandbank M, Pustejovsky JE. Evidence That Intervention Dosage Is Associated With Better Outcomes in Autism-Reply. JAMA Pediatr. 2025 Jan 01; 179(1):102-103.
Evidence That Intervention Dosage Is Associated With Better Outcomes in Autism-Reply.
Pustejovsky JE. Converting from d to r to z when the design uses extreme groups, dichotomization, or experimental control. Psychol Methods. 2014 Mar; 19(1):92-112.
Converting from d to r to z when the design uses extreme groups, dichotomization, or experimental control.
Odom SL, Barton EE, Reichow B, Swaminathan H, Pustejovsky JE
Odom SL, Barton EE, Reichow B, Swaminathan H, Pustejovsky JE. Between-case standardized effect size analysis of single case designs: Examination of the two methods. Res Dev Disabil. 2018 Aug; 79:88-96.
Between-case standardized effect size analysis of single case designs: Examination of the two methods.
Holderness E, Miller N, Cawkwell P, Bolton K, Meteer M, Pustejovsky J, Hall MH
Holderness E, Miller N, Cawkwell P, Bolton K, Meteer M, Pustejovsky J, Hall MH. Analysis of risk factor domains in psychosis patient health records. J Biomed Semantics. 2019 10 31; 10(1):19.
Analysis of risk factor domains in psychosis patient health records.
Brown SW, Bonn J, Kazeminejad G, Zaenen A, Pustejovsky J, Palmer M
Brown SW, Bonn J, Kazeminejad G, Zaenen A, Pustejovsky J, Palmer M. Semantic Representations for NLP Using VerbNet and the Generative Lexicon. Front Artif Intell. 2022; 5:821697.
Semantic Representations for NLP Using VerbNet and the Generative Lexicon.
Park CL, Pustejovsky JE, Trevino K, Sherman AC, Esposito C, Berendsen M, Salsman JM
Park CL, Pustejovsky JE, Trevino K, Sherman AC, Esposito C, Berendsen M, Salsman JM. Effects of psychosocial interventions on meaning and purpose in adults with cancer: A systematic review and meta-analysis. Cancer. 2019 07 15; 125(14):2383-2393.
Effects of psychosocial interventions on meaning and purpose in adults with cancer: A systematic review and meta-analysis.
Protzko J, Krosnick J, Nelson L, Nosek BA, Axt J, Berent M, Buttrick N, DeBell M, Ebersole CR, Lundmark S, MacInnis B, O'Donnell M, Perfecto H, Pustejovsky JE, Roeder SS, Walleczek J, Schooler JW
Protzko J, Krosnick J, Nelson L, Nosek BA, Axt J, Berent M, Buttrick N, DeBell M, Ebersole CR, Lundmark S, MacInnis B, O'Donnell M, Perfecto H, Pustejovsky JE, Roeder SS, Walleczek J, Schooler JW. Retraction Note: High replicability of newly discovered social-behavioural findings is achievable. Nat Hum Behav. 2024 Oct; 8(10):2067.
Retraction Note: High replicability of newly discovered social-behavioural findings is achievable.
Shadish WR, Hedges LV, Pustejovsky JE. Analysis and meta-analysis of single-case designs with a standardized mean difference statistic: a primer and applications. J Sch Psychol. 2014 Apr; 52(2):123-47.
Analysis and meta-analysis of single-case designs with a standardized mean difference statistic: a primer and applications.
Sandbank M, Pustejovsky JE, Bottema-Beutel K, Caldwell N, Feldman JI, Crowley LaPoint S, Woynaroski T
Sandbank M, Pustejovsky JE, Bottema-Beutel K, Caldwell N, Feldman JI, Crowley LaPoint S, Woynaroski T. Determining Associations Between Intervention Amount and Outcomes for Young Autistic Children: A Meta-Analysis. JAMA Pediatr. 2024 Aug 01; 178(8):763-773.
Determining Associations Between Intervention Amount and Outcomes for Young Autistic Children: A Meta-Analysis.
Holderness E, Atwood B, Verhagen M, Shinn AK, Cawkwell P, Cerruti H, Pustejovsky J, Hall MH
Holderness E, Atwood B, Verhagen M, Shinn AK, Cawkwell P, Cerruti H, Pustejovsky J, Hall MH. Machine learning in psychiatric health records: A gold standard approach to trauma annotation. Transl Psychiatry. 2025 Aug 01; 15(1):260.
Machine learning in psychiatric health records: A gold standard approach to trauma annotation.
Sherman AC, Merluzzi TV, Pustejovsky JE, Park CL, George L, Fitchett G, Jim HS, Munoz AR, Danhauer SC, Snyder MA, Salsman JM
Sherman AC, Merluzzi TV, Pustejovsky JE, Park CL, George L, Fitchett G, Jim HS, Munoz AR, Danhauer SC, Snyder MA, Salsman JM. A meta-analytic review of religious or spiritual involvement and social health among cancer patients. Cancer. 2015 Nov 01; 121(21):3779-88.
A meta-analytic review of religious or spiritual involvement and social health among cancer patients.
Joshi M, Pustejovsky JE, Beretvas SN. Cluster wild bootstrapping to handle dependent effect sizes in meta-analysis with a small number of studies. Res Synth Methods. 2022 Jul; 13(4):457-477.
Cluster wild bootstrapping to handle dependent effect sizes in meta-analysis with a small number of studies.
Jim HS, Pustejovsky JE, Park CL, Danhauer SC, Sherman AC, Fitchett G, Merluzzi TV, Munoz AR, George L, Snyder MA, Salsman JM
Jim HS, Pustejovsky JE, Park CL, Danhauer SC, Sherman AC, Fitchett G, Merluzzi TV, Munoz AR, George L, Snyder MA, Salsman JM. Religion, spirituality, and physical health in cancer patients: A meta-analysis. Cancer. 2015 Nov 01; 121(21):3760-8.
Religion, spirituality, and physical health in cancer patients: A meta-analysis.
Treves IN, Chen YY, Wilson CL, Verdonk C, Qina'au J, Pustejovsky JE, Goldberg SB, Mehling W, Schuman-Olivier Z, Khalsa SS
Treves IN, Chen YY, Wilson CL, Verdonk C, Qina'au J, Pustejovsky JE, Goldberg SB, Mehling W, Schuman-Olivier Z, Khalsa SS. Minding the Body: A Meta-analysis of the Effects of Mindfulness Meditation Training on Self-reported Interoception. Res Sq. 2025 Jun 04.
Minding the Body: A Meta-analysis of the Effects of Mindfulness Meditation Training on Self-reported Interoception.
Pustejovsky JE, Swan DM, English KW. An Examination of Measurement Procedures and Characteristics of Baseline Outcome Data in Single-Case Research. Behav Modif. 2023 11; 47(6):1423-1454.
An Examination of Measurement Procedures and Characteristics of Baseline Outcome Data in Single-Case Research.
Atwood B, Holderness E, Verhagen M, Shinn AK, Cawkwell P, Cerruti H, Pustejovsky J, Hall MH
medRxiv : the preprint server for health sciences
Atwood B, Holderness E, Verhagen M, Shinn AK, Cawkwell P, Cerruti H, Pustejovsky J, Hall MH. Machine Learning in Psychiatric Health Records: A Gold Standard Approach to Trauma Annotation. medRxiv. 2025 Mar 11.
Machine Learning in Psychiatric Health Records: A Gold Standard Approach to Trauma Annotation.
Lee YR, Pustejovsky JE. Comparing random effects models, ordinary least squares, or fixed effects with cluster robust standard errors for cross-classified data. Psychol Methods. 2024 Dec; 29(6):1084-1099.
Comparing random effects models, ordinary least squares, or fixed effects with cluster robust standard errors for cross-classified data.
Protzko J, Krosnick J, Nelson L, Nosek BA, Axt J, Berent M, Buttrick N, DeBell M, Ebersole CR, Lundmark S, MacInnis B, O'Donnell M, Perfecto H, Pustejovsky JE, Roeder SS, Walleczek J, Schooler JW. High replicability of newly discovered social-behavioural findings is achievable. Nat Hum Behav. 2024 Feb; 8(2):311-319.
High replicability of newly discovered social-behavioural findings is achievable.
Wren JD, Chang JT, Pustejovsky J, Adar E, Garner HR, Altman RB
Wren JD, Chang JT, Pustejovsky J, Adar E, Garner HR, Altman RB. Biomedical term mapping databases. Nucleic Acids Res. 2005 Jan 01; 33(Database issue):D289-93.
Poppe A, Ritter FDE, Bais L, Pustejovsky JE, van Tol MJ, Curcic-Blake B, Pijnenborg GHM, van der Meer L
Poppe A, Ritter FDE, Bais L, Pustejovsky JE, van Tol MJ, Curcic-Blake B, Pijnenborg GHM, van der Meer L. The efficacy of combining cognitive training and noninvasive brain stimulation: A transdiagnostic systematic review and meta-analysis. Psychol Bull. 2024 Feb; 150(2):192-213.
The efficacy of combining cognitive training and noninvasive brain stimulation: A transdiagnostic systematic review and meta-analysis.
McLouth LE, Ford CG, Pustejovsky JE, Park CL, Sherman AC, Trevino K, Salsman JM
McLouth LE, Ford CG, Pustejovsky JE, Park CL, Sherman AC, Trevino K, Salsman JM. A systematic review and meta-analysis of effects of psychosocial interventions on spiritual well-being in adults with cancer. Psychooncology. 2021 02; 30(2):147-158.
A systematic review and meta-analysis of effects of psychosocial interventions on spiritual well-being in adults with cancer.
Tipton E, Pustejovsky JE, Ahmadi H. Current practices in meta-regression in psychology, education, and medicine. Res Synth Methods. 2019 Jun; 10(2):180-194.
Current practices in meta-regression in psychology, education, and medicine.
Henlein A, Gopinath A, Krishnaswamy N, Mehler A, Pustejovsky J
Henlein A, Gopinath A, Krishnaswamy N, Mehler A, Pustejovsky J. Grounding human-object interaction to affordance behavior in multimodal datasets. Front Artif Intell. 2023; 6:1084740.
Grounding human-object interaction to affordance behavior in multimodal datasets.