 Connection
Matthew Olm to Microbiota
This is a "connection" page, showing publications Matthew Olm has written about Microbiota.
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Connection Strength |
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2.517 |
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Sempeck CD, Olm MR. Mapping the oral microbiome opens links to periodontitis. Cell Host Microbe. 2025 Nov 12; 33(11):1832-1833.
Score: 0.541
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Olm MR, Mueller NT. Milk to mucus: How B. fragilis colonizes the gut. Cell Host Microbe. 2024 02 14; 32(2):149-150.
Score: 0.479
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Olm MR, Crits-Christoph A, Bouma-Gregson K, Firek BA, Morowitz MJ, Banfield JF. inStrain profiles population microdiversity from metagenomic data and sensitively detects shared microbial strains. Nat Biotechnol. 2021 06; 39(6):727-736.
Score: 0.387
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Fessler JL, Olm MR, Engleman EG, Sonnenburg JL. Integration of donor microbiota following FMT correlates with anti-PD-1 response in melanoma. Nat Commun. 2026 May 30; 17(1).
Score: 0.140
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Gellman RH, Olm MR, Terrapon N, Enam F, Higginbottom SK, Sonnenburg JL, Sonnenburg ED. Hadza Prevotella require diet-derived microbiota-accessible carbohydrates to persist in mice. Cell Rep. 2023 11 28; 42(11).
Score: 0.117
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Carter MM, Olm MR, Merrill BD, Dahan D, Tripathi S, Spencer SP, Yu FB, Jain S, Neff N, Jha AR, Sonnenburg ED, Sonnenburg JL. Ultra-deep sequencing of Hadza hunter-gatherers recovers vanishing gut microbes. Cell. 2023 07 06; 186(14):3111-3124.e13.
Score: 0.115
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Lou YC, Hoff J, Olm MR, West-Roberts J, Diamond S, Firek BA, Morowitz MJ, Banfield JF. Using strain-resolved analysis to identify contamination in metagenomics data. Microbiome. 2023 03 02; 11(1):36.
Score: 0.112
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Carter MM, Olm MR, Sonnenburg ED. Microbiome assembly in The Gambia. Nat Microbiol. 2022 01; 7(1):18-19.
Score: 0.103
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Mirzayi C, Renson A, Zohra F, Elsafoury S, Geistlinger L, Kasselman LJ, Eckenrode K, van de Wijgert J, Loughman A, Marques FZ, MacIntyre DA, Arumugam M, Azhar R, Beghini F, Bergstrom K, Bhatt A, Bisanz JE, Braun J, Bravo HC, Buck GA, Bushman F, Casero D, Clarke G, Collado MC, Cotter PD, Cryan JF, Demmer RT, Devkota S, Elinav E, Escobar JS, Fettweis J, Finn RD, Fodor AA, Forslund S, Franke A, Furlanello C, Gilbert J, Grice E, Haibe-Kains B, Handley S, Herd P, Holmes S, Jacobs JP, Karstens L, Knight R, Knights D, Koren O, Kwon DS, Langille M, Lindsay B, McGovern D, McHardy AC, McWeeney S, Mueller NT, Nezi L, Olm M, Palm N, Pasolli E, Raes J, Redinbo MR, Rühlemann M, Balfour Sartor R, Schloss PD, Schriml L, Segal E, Shardell M, Sharpton T, Smirnova E, Sokol H, Sonnenburg JL, Srinivasan S, Thingholm LB, Turnbaugh PJ, Upadhyay V, Walls RL, Wilmes P, Yamada T, Zeller G, Zhang M, Zhao N, Zhao L, Bao W, Culhane A, Devanarayan V, Dopazo J, Fan X, Fischer M, Jones W, Kusko R, Mason CE, Mercer TR, Sansone SA, Scherer A, Shi L, Thakkar S, Tong W, Wolfinger R, Hunter C, Segata N, Huttenhower C, Dowd JB, Jones HE, Waldron L. Reporting guidelines for human microbiome research: the STORMS checklist. Nat Med. 2021 11; 27(11):1885-1892.
Score: 0.103
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West PT, Peters SL, Olm MR, Yu FB, Gause H, Lou YC, Firek BA, Baker R, Johnson AD, Morowitz MJ, Hettich RL, Banfield JF. Genetic and behavioral adaptation of Candida parapsilosis to the microbiome of hospitalized infants revealed by in situ genomics, transcriptomics, and proteomics. Microbiome. 2021 06 21; 9(1):142.
Score: 0.100
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Matheus Carnevali PB, Lavy A, Thomas AD, Crits-Christoph A, Diamond S, Méheust R, Olm MR, Sharrar A, Lei S, Dong W, Falco N, Bouskill N, Newcomer ME, Nico P, Wainwright H, Dwivedi D, Williams KH, Hubbard S, Banfield JF. Meanders as a scaling motif for understanding of floodplain soil microbiome and biogeochemical potential at the watershed scale. Microbiome. 2021 05 22; 9(1):121.
Score: 0.099
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Devoto AE, Santini JM, Olm MR, Anantharaman K, Munk P, Tung J, Archie EA, Turnbaugh PJ, Seed KD, Blekhman R, Aarestrup FM, Thomas BC, Banfield JF. Megaphages infect Prevotella and variants are widespread in gut microbiomes. Nat Microbiol. 2019 04; 4(4):693-700.
Score: 0.084
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Brown CT, Xiong W, Olm MR, Thomas BC, Baker R, Firek B, Morowitz MJ, Hettich RL, Banfield JF. Hospitalized Premature Infants Are Colonized by Related Bacterial Strains with Distinct Proteomic Profiles. mBio. 2018 04 10; 9(2).
Score: 0.080
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Caffrey EB, Olm MR, Kothe CI, Wastyk HC, Evans JD, Sonnenburg JL. MiFoDB, a workflow for microbial food metagenomic characterization, enables high-resolution analysis of fermented food microbial dynamics. mSystems. 2025 Sep 23; 10(9):e0014125.
Score: 0.033
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Sher Y, Olm MR, Raveh-Sadka T, Brown CT, Sher R, Firek B, Baker R, Morowitz MJ, Banfield JF. Combined analysis of microbial metagenomic and metatranscriptomic sequencing data to assess in situ physiological conditions in the premature infant gut. PLoS One. 2020; 15(3):e0229537.
Score: 0.023
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Connection Strength
The connection strength for concepts is the sum of the scores for each matching publication.
Publication scores are based on many factors, including how long ago they were written and whether the person is a first or senior author.
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