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Connection

John Markley to Hydrogen Bonding

This is a "connection" page, showing publications John Markley has written about Hydrogen Bonding.

 
Connection Strength
 
 
 
0.783
 
  1. Lee W, Cornilescu G, Dashti H, Eghbalnia HR, Tonelli M, Westler WM, Butcher SE, Henzler-Wildman KA, Markley JL. Integrative NMR for biomolecular research. J Biomol NMR. 2016 04; 64(4):307-32.
    View in: PubMed
    Score: 0.121
  2. Westler WM, Lin IJ, Perczel A, Weinhold F, Markley JL. Hyperfine-shifted 13C resonance assignments in an iron-sulfur protein with quantum chemical verification: aliphatic C-H···S 3-center-4-electron interactions. J Am Chem Soc. 2011 Feb 09; 133(5):1310-6.
    View in: PubMed
    Score: 0.084
  3. Ahn HC, Juranic N, Macura S, Markley JL. Three-dimensional structure of the water-insoluble protein crambin in dodecylphosphocholine micelles and its minimal solvent-exposed surface. J Am Chem Soc. 2006 Apr 05; 128(13):4398-404.
    View in: PubMed
    Score: 0.061
  4. Lin IJ, Gebel EB, Machonkin TE, Westler WM, Markley JL. Changes in hydrogen-bond strengths explain reduction potentials in 10 rubredoxin variants. Proc Natl Acad Sci U S A. 2005 Oct 11; 102(41):14581-6.
    View in: PubMed
    Score: 0.059
  5. Song J, Laskowski M, Qasim MA, Markley JL. Two conformational states of Turkey ovomucoid third domain at low pH: three-dimensional structures, internal dynamics, and interconversion kinetics and thermodynamics. Biochemistry. 2003 Jun 03; 42(21):6380-91.
    View in: PubMed
    Score: 0.050
  6. Song J, Markley JL. Protein inhibitors of serine proteinases: role of backbone structure and dynamics in controlling the hydrolysis constant. Biochemistry. 2003 May 13; 42(18):5186-94.
    View in: PubMed
    Score: 0.050
  7. Assadi-Porter FM, Abildgaard F, Blad H, Markley JL. Correlation of the sweetness of variants of the protein brazzein with patterns of hydrogen bonds detected by NMR spectroscopy. J Biol Chem. 2003 Aug 15; 278(33):31331-9.
    View in: PubMed
    Score: 0.050
  8. Song J, Laskowski M, Qasim MA, Markley JL. NMR determination of pKa values for Asp, Glu, His, and Lys mutants at each variable contiguous enzyme-inhibitor contact position of the turkey ovomucoid third domain. Biochemistry. 2003 Mar 18; 42(10):2847-56.
    View in: PubMed
    Score: 0.049
  9. Lin IJ, Gebel EB, Machonkin TE, Westler WM, Markley JL. Correlation between hydrogen bond lengths and reduction potentials in Clostridium pasteurianum rubredoxin. J Am Chem Soc. 2003 Feb 12; 125(6):1464-5.
    View in: PubMed
    Score: 0.049
  10. Westler WM, Frey PA, Lin J, Wemmer DE, Morimoto H, Williams PG, Markley JL. Evidence for a strong hydrogen bond in the catalytic dyad of transition-state analogue inhibitor complexes of chymotrypsin from proton-triton NMR isotope shifts. J Am Chem Soc. 2002 Apr 24; 124(16):4196-7.
    View in: PubMed
    Score: 0.046
  11. Wilkens SJ, Westler WM, Weinhold F, Markley JL. Trans-hydrogen-bond (h2)J(NN) and (h1)J(NH) couplings in the DNA A-T base pair: natural bond orbital analysis. J Am Chem Soc. 2002 Feb 20; 124(7):1190-1.
    View in: PubMed
    Score: 0.046
  12. Kaslik G, Westler WM, Gráf L, Markley JL. Properties of the His57-Asp102 dyad of rat trypsin D189S in the zymogen, activated enzyme, and alpha1-proteinase inhibitor complexed forms. Arch Biochem Biophys. 1999 Feb 15; 362(2):254-64.
    View in: PubMed
    Score: 0.037
  13. Markley JL, Westler WM. Protonation-state dependence of hydrogen bond strengths and exchange rates in a serine protease catalytic triad: bovine chymotrypsinogen A. Biochemistry. 1996 Aug 27; 35(34):11092-7.
    View in: PubMed
    Score: 0.031
  14. Poplawski A, Hu K, Lee W, Natesan S, Peng D, Carlson S, Shi X, Balaz S, Markley JL, Glass KC. Molecular insights into the recognition of N-terminal histone modifications by the BRPF1 bromodomain. J Mol Biol. 2014 Apr 17; 426(8):1661-76.
    View in: PubMed
    Score: 0.026
  15. Bingman CA, Johnson KA, Peterson FC, Frederick RO, Zhao Q, Thao S, Fox BG, Volkman BF, Jeon WB, Smith DW, Newman CS, Ulrich EL, Hegeman A, Sussman MR, Markley JL, Phillips GN. Crystal structure of the protein from gene At3g17210 of Arabidopsis thaliana. Proteins. 2004 Oct 01; 57(1):218-20.
    View in: PubMed
    Score: 0.014
  16. Wilkens SJ, Westler WM, Markley JL, Weinhold F. Natural J-coupling analysis: interpretation of scalar J-couplings in terms of natural bond orbitals. J Am Chem Soc. 2001 Dec 05; 123(48):12026-36.
    View in: PubMed
    Score: 0.011
Connection Strength

The connection strength for concepts is the sum of the scores for each matching publication.

Publication scores are based on many factors, including how long ago they were written and whether the person is a first or senior author.

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