 Connection
John Markley to Protein Structure, Tertiary
This is a "connection" page, showing publications John Markley has written about Protein Structure, Tertiary.
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0.718 |
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Alderson TR, Kim JH, Cai K, Frederick RO, Tonelli M, Markley JL. The specialized Hsp70 (HscA) interdomain linker binds to its nucleotide-binding domain and stimulates ATP hydrolysis in both cis and trans configurations. Biochemistry. 2014 Nov 25; 53(46):7148-59.
Score: 0.095
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Lee W, Watters KE, Troupis AT, Reinen NM, Suchy FP, Moyer KL, Frederick RO, Tonelli M, Aceti DJ, Palmenberg AC, Markley JL. Solution structure of the 2A protease from a common cold agent, human rhinovirus C2, strain W12. PLoS One. 2014; 9(6):e97198.
Score: 0.092
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Song J, Markley JL. Three-dimensional structure determined for a subunit of human tRNA splicing endonuclease (Sen15) reveals a novel dimeric fold. J Mol Biol. 2007 Feb 09; 366(1):155-64.
Score: 0.054
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Singh S, Cornilescu CC, Tyler RC, Cornilescu G, Tonelli M, Lee MS, Markley JL. Solution structure of a late embryogenesis abundant protein (LEA14) from Arabidopsis thaliana, a cellular stress-related protein. Protein Sci. 2005 Oct; 14(10):2601-9.
Score: 0.050
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Song J, Tyler RC, Wrobel RL, Frederick RO, Vojtek FC, Jeon WB, Lee MS, Markley JL. Solution structure of At3g04780.1-des15, an Arabidopsis thaliana ortholog of the C-terminal domain of human thioredoxin-like protein. Protein Sci. 2005 Apr; 14(4):1059-63.
Score: 0.048
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Assadi-Porter FM, Abildgaard F, Blad H, Cornilescu CC, Markley JL. Brazzein, a small, sweet protein: effects of mutations on its structure, dynamics and functional properties. Chem Senses. 2005 Jan; 30 Suppl 1:i90-1.
Score: 0.048
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Song J, Laskowski M, Qasim MA, Markley JL. Two conformational states of Turkey ovomucoid third domain at low pH: three-dimensional structures, internal dynamics, and interconversion kinetics and thermodynamics. Biochemistry. 2003 Jun 03; 42(21):6380-91.
Score: 0.043
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Assadi-Porter FM, Abildgaard F, Blad H, Markley JL. Correlation of the sweetness of variants of the protein brazzein with patterns of hydrogen bonds detected by NMR spectroscopy. J Biol Chem. 2003 Aug 15; 278(33):31331-9.
Score: 0.043
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Song J, Laskowski M, Qasim MA, Markley JL. NMR determination of pKa values for Asp, Glu, His, and Lys mutants at each variable contiguous enzyme-inhibitor contact position of the turkey ovomucoid third domain. Biochemistry. 2003 Mar 18; 42(10):2847-56.
Score: 0.042
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Song J, Markley JL. NMR chemical shift mapping of the binding site of a protein proteinase inhibitor: changes in the (1)H, (13)C and (15)N NMR chemical shifts of turkey ovomucoid third domain upon binding to bovine chymotrypsin A(alpha). J Mol Recognit. 2001 May-Jun; 14(3):166-71.
Score: 0.037
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Volkman BF, Anderson ME, Clark KD, Hayakawa Y, Strand MR, Markley JL. Structure of the insect cytokine peptide plasmatocyte-spreading peptide 1 from Pseudoplusia includens. J Biol Chem. 1999 Feb 19; 274(8):4493-6.
Score: 0.032
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Huang Y, Nokhrin S, Hassanzadeh-Ghassabeh G, Yu CH, Yang H, Barry AN, Tonelli M, Markley JL, Muyldermans S, Dmitriev OY, Lutsenko S. Interactions between metal-binding domains modulate intracellular targeting of Cu(I)-ATPase ATP7B, as revealed by nanobody binding. J Biol Chem. 2014 Nov 21; 289(47):32682-93.
Score: 0.023
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Cornilescu CC, Cornilescu G, Burgie ES, Markley JL, Ulijasz AT, Vierstra RD. Dynamic structural changes underpin photoconversion of a blue/green cyanobacteriochrome between its dark and photoactivated states. J Biol Chem. 2014 Jan 31; 289(5):3055-65.
Score: 0.022
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Zhu J, Rao H, Tonelli M, Westler WM, Singarapu KK, Markley JL, DeLuca HF, Assadi-Porter FM. Efficient stable isotope labeling and purification of vitamin D receptor from inclusion bodies. Protein Expr Purif. 2012 Sep; 85(1):25-31.
Score: 0.020
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Song J, McGivern JV, Nichols KW, Markley JL, Sheets MD. Structural basis for RNA recognition by a type II poly(A)-binding protein. Proc Natl Acad Sci U S A. 2008 Oct 07; 105(40):15317-22.
Score: 0.015
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Cornilescu G, Ulijasz AT, Cornilescu CC, Markley JL, Vierstra RD. Solution structure of a cyanobacterial phytochrome GAF domain in the red-light-absorbing ground state. J Mol Biol. 2008 Nov 07; 383(2):403-13.
Score: 0.015
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Frederick RO, Bergeman L, Blommel PG, Bailey LJ, McCoy JG, Song J, Meske L, Bingman CA, Riters M, Dillon NA, Kunert J, Yoon JW, Lim A, Cassidy M, Bunge J, Aceti DJ, Primm JG, Markley JL, Phillips GN, Fox BG. Small-scale, semi-automated purification of eukaryotic proteins for structure determination. J Struct Funct Genomics. 2007 Dec; 8(4):153-66.
Score: 0.015
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Cornilescu G, Vinarov DA, Tyler EM, Markley JL, Cornilescu CC. Solution structure of a single-domain thiosulfate sulfurtransferase from Arabidopsis thaliana. Protein Sci. 2006 Dec; 15(12):2836-41.
Score: 0.014
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Hemmi H, Studts JM, Chae YK, Song J, Markley JL, Fox BG. Solution structure of the toluene 4-monooxygenase effector protein (T4moD). Biochemistry. 2001 Mar 27; 40(12):3512-24.
Score: 0.009
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Connection Strength
The connection strength for concepts is the sum of the scores for each matching publication.
Publication scores are based on many factors, including how long ago they were written and whether the person is a first or senior author.
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