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Connection

David Nesbitt to Thermodynamics

This is a "connection" page, showing publications David Nesbitt has written about Thermodynamics.

 
Connection Strength
 
 
 
4.735
 
  1. Nicholson DA, Nesbitt DJ. Kinetic and Thermodynamic Control of G-Quadruplex Polymorphism by Na+ and K+ Cations. J Phys Chem B. 2023 08 10; 127(31):6842-6855.
    View in: PubMed
    Score: 0.748
  2. Sung HL, Nesbitt DJ. Novel Heat-Promoted Folding Dynamics of the yybP-ykoY Manganese Riboswitch: Kinetic and Thermodynamic Studies at the Single-Molecule Level. J Phys Chem B. 2019 07 05; 123(26):5412-5422.
    View in: PubMed
    Score: 0.563
  3. Dupuis NF, Holmstrom ED, Nesbitt DJ. Molecular-crowding effects on single-molecule RNA folding/unfolding thermodynamics and kinetics. Proc Natl Acad Sci U S A. 2014 Jun 10; 111(23):8464-9.
    View in: PubMed
    Score: 0.396
  4. Holmstrom ED, Dupuis NF, Nesbitt DJ. Pulsed IR heating studies of single-molecule DNA duplex dissociation kinetics and thermodynamics. Biophys J. 2014 Jan 07; 106(1):220-31.
    View in: PubMed
    Score: 0.386
  5. Holmstrom ED, Fiore JL, Nesbitt DJ. Thermodynamic origins of monovalent facilitated RNA folding. Biochemistry. 2012 May 08; 51(18):3732-43.
    View in: PubMed
    Score: 0.343
  6. Marton Menendez A, Nesbitt DJ. Ionic Cooperativity between Lysine and Potassium in the Lysine Riboswitch: Single-Molecule Kinetic and Thermodynamic Studies. J Phys Chem B. 2023 03 23; 127(11):2430-2440.
    View in: PubMed
    Score: 0.182
  7. Sung HL, Nesbitt DJ. Synergism in the Molecular Crowding of Ligand-Induced Riboswitch Folding: Kinetic/Thermodynamic Insights from Single-Molecule Spectroscopy. J Phys Chem B. 2022 09 01; 126(34):6419-6427.
    View in: PubMed
    Score: 0.175
  8. Marton Menendez A, Nesbitt DJ. Lysine-Dependent Entropy Effects in the B. subtilis Lysine Riboswitch: Insights from Single-Molecule Thermodynamic Studies. J Phys Chem B. 2022 01 13; 126(1):69-79.
    View in: PubMed
    Score: 0.168
  9. Sung HL, Nesbitt DJ. Effects of Molecular Crowders on Single-Molecule Nucleic Acid Folding: Temperature-Dependent Studies Reveal True Crowding vs Enthalpic Interactions. J Phys Chem B. 2021 12 09; 125(48):13147-13157.
    View in: PubMed
    Score: 0.166
  10. Nicholson DA, Jia B, Nesbitt DJ. Measuring Excess Heat Capacities of Deoxyribonucleic Acid (DNA) Folding at the Single-Molecule Level. J Phys Chem B. 2021 09 02; 125(34):9719-9726.
    View in: PubMed
    Score: 0.163
  11. Nicholson DA, Sengupta A, Nesbitt DJ. Chirality-Dependent Amino Acid Modulation of RNA Folding. J Phys Chem B. 2020 12 24; 124(51):11561-11572.
    View in: PubMed
    Score: 0.156
  12. Sung HL, Nesbitt DJ. Sequential Folding of the Nickel/Cobalt Riboswitch Is Facilitated by a Conformational Intermediate: Insights from Single-Molecule Kinetics and Thermodynamics. J Phys Chem B. 2020 08 27; 124(34):7348-7360.
    View in: PubMed
    Score: 0.152
  13. Sung HL, Nesbitt DJ. DNA Hairpin Hybridization under Extreme Pressures: A Single-Molecule FRET Study. J Phys Chem B. 2020 01 09; 124(1):110-120.
    View in: PubMed
    Score: 0.146
  14. Nicholson DA, Sengupta A, Sung HL, Nesbitt DJ. Amino Acid Stabilization of Nucleic Acid Secondary Structure: Kinetic Insights from Single-Molecule Studies. J Phys Chem B. 2018 11 01; 122(43):9869-9876.
    View in: PubMed
    Score: 0.134
  15. Dupuis NF, Holmstrom ED, Nesbitt DJ. Tests of Kramers' Theory at the Single-Molecule Level: Evidence for Folding of an Isolated RNA Tertiary Interaction at the Viscous Speed Limit. J Phys Chem B. 2018 09 27; 122(38):8796-8804.
    View in: PubMed
    Score: 0.134
  16. Holmstrom ED, Nesbitt DJ. Biophysical Insights from Temperature-Dependent Single-Molecule F?rster Resonance Energy Transfer. Annu Rev Phys Chem. 2016 05 27; 67:441-65.
    View in: PubMed
    Score: 0.114
  17. Holmstrom ED, Dupuis NF, Nesbitt DJ. Kinetic and thermodynamic origins of osmolyte-influenced nucleic acid folding. J Phys Chem B. 2015 Mar 05; 119(9):3687-96.
    View in: PubMed
    Score: 0.104
  18. Holmstrom ED, Polaski JT, Batey RT, Nesbitt DJ. Single-molecule conformational dynamics of a biologically functional hydroxocobalamin riboswitch. J Am Chem Soc. 2014 Dec 03; 136(48):16832-43.
    View in: PubMed
    Score: 0.102
  19. Holmstrom ED, Nesbitt DJ. Single-molecule fluorescence resonance energy transfer studies of the human telomerase RNA pseudoknot: temperature-/urea-dependent folding kinetics and thermodynamics. J Phys Chem B. 2014 Apr 10; 118(14):3853-63.
    View in: PubMed
    Score: 0.098
  20. Fiore JL, Nesbitt DJ. An RNA folding motif: GNRA tetraloop-receptor interactions. Q Rev Biophys. 2013 Aug; 46(3):223-64.
    View in: PubMed
    Score: 0.094
  21. Fiore JL, Holmstrom ED, Fiegland LR, Hodak JH, Nesbitt DJ. The role of counterion valence and size in GAAA tetraloop-receptor docking/undocking kinetics. J Mol Biol. 2012 Oct 19; 423(2):198-216.
    View in: PubMed
    Score: 0.087
  22. Fiore JL, Kraemer B, Koberling F, Edmann R, Nesbitt DJ. Enthalpy-driven RNA folding: single-molecule thermodynamics of tetraloop-receptor tertiary interaction. Biochemistry. 2009 Mar 24; 48(11):2550-8.
    View in: PubMed
    Score: 0.069
  23. Downey CD, Fiore JL, Stoddard CD, Hodak JH, Nesbitt DJ, Pardi A. Metal ion dependence, thermodynamics, and kinetics for intramolecular docking of a GAAA tetraloop and receptor connected by a flexible linker. Biochemistry. 2006 Mar 21; 45(11):3664-73.
    View in: PubMed
    Score: 0.056
Connection Strength

The connection strength for concepts is the sum of the scores for each matching publication.

Publication scores are based on many factors, including how long ago they were written and whether the person is a first or senior author.

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