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Connection

Daniel Frank to Molecular Sequence Data

This is a "connection" page, showing publications Daniel Frank has written about Molecular Sequence Data.

 
Connection Strength
 
 
 
0.669
 
  1. Frank DN, Manigart O, Leroy V, Meda N, Val?a D, Zhang W, Dabis F, Pace NR, Van de Perre P, Janoff EN. Altered vaginal microbiota are associated with perinatal mother-to-child transmission of HIV in African women from Burkina Faso. J Acquir Immune Defic Syndr. 2012 Jul 01; 60(3):299-306.
    View in: PubMed
    Score: 0.070
  2. Frank DN, Feazel LM, Bessesen MT, Price CS, Janoff EN, Pace NR. The human nasal microbiota and Staphylococcus aureus carriage. PLoS One. 2010 May 17; 5(5):e10598.
    View in: PubMed
    Score: 0.061
  3. Frank DN, Wilson SS, St Amand AL, Pace NR. Culture-independent microbiological analysis of foley urinary catheter biofilms. PLoS One. 2009 Nov 12; 4(11):e7811.
    View in: PubMed
    Score: 0.059
  4. Frank DN. BARCRAWL and BARTAB: software tools for the design and implementation of barcoded primers for highly multiplexed DNA sequencing. BMC Bioinformatics. 2009 Oct 29; 10:362.
    View in: PubMed
    Score: 0.059
  5. Frank DN, St Amand AL, Feldman RA, Boedeker EC, Harpaz N, Pace NR. Molecular-phylogenetic characterization of microbial community imbalances in human inflammatory bowel diseases. Proc Natl Acad Sci U S A. 2007 Aug 21; 104(34):13780-5.
    View in: PubMed
    Score: 0.050
  6. Frank DN, Adamidi C, Ehringer MA, Pitulle C, Pace NR. Phylogenetic-comparative analysis of the eukaryal ribonuclease P RNA. RNA. 2000 Dec; 6(12):1895-904.
    View in: PubMed
    Score: 0.032
  7. Frank DN, Pace NR. Ribonuclease P: unity and diversity in a tRNA processing ribozyme. Annu Rev Biochem. 1998; 67:153-80.
    View in: PubMed
    Score: 0.026
  8. Frank DN, Pace NR. In vitro selection for altered divalent metal specificity in the RNase P RNA. Proc Natl Acad Sci U S A. 1997 Dec 23; 94(26):14355-60.
    View in: PubMed
    Score: 0.026
  9. Frank DN, Ellington AE, Pace NR. In vitro selection of RNase P RNA reveals optimized catalytic activity in a highly conserved structural domain. RNA. 1996 Dec; 2(12):1179-88.
    View in: PubMed
    Score: 0.024
  10. Son JS, Khair S, Pettet DW, Ouyang N, Tian X, Zhang Y, Zhu W, Mackenzie GG, Robertson CE, Ir D, Frank DN, Rigas B, Li E. Altered Interactions between the Gut Microbiome and Colonic Mucosa Precede Polyposis in APCMin/+ Mice. PLoS One. 2015; 10(6):e0127985.
    View in: PubMed
    Score: 0.022
  11. Ling AL, Robertson CE, Harris JK, Frank DN, Kotter CV, Stevens MJ, Pace NR, Hernandez MT. High-resolution microbial community succession of microbially induced concrete corrosion in working sanitary manholes. PLoS One. 2015; 10(3):e0116400.
    View in: PubMed
    Score: 0.021
  12. Frank DN, Harris ME, Pace NR. Rational design of self-cleaving pre-tRNA-ribonuclease P RNA conjugates. Biochemistry. 1994 Sep 06; 33(35):10800-8.
    View in: PubMed
    Score: 0.020
  13. Frank DN, Roiha H, Guthrie C. Architecture of the U5 small nuclear RNA. Mol Cell Biol. 1994 Mar; 14(3):2180-90.
    View in: PubMed
    Score: 0.020
  14. Robertson CE, Baumgartner LK, Harris JK, Peterson KL, Stevens MJ, Frank DN, Pace NR. Culture-independent analysis of aerosol microbiology in a metropolitan subway system. Appl Environ Microbiol. 2013 Jun; 79(11):3485-93.
    View in: PubMed
    Score: 0.019
  15. Frank D, Patterson B, Guthrie C. Synthetic lethal mutations suggest interactions between U5 small nuclear RNA and four proteins required for the second step of splicing. Mol Cell Biol. 1992 Nov; 12(11):5197-205.
    View in: PubMed
    Score: 0.018
  16. Frank D, Guthrie C. An essential splicing factor, SLU7, mediates 3' splice site choice in yeast. Genes Dev. 1992 Nov; 6(11):2112-24.
    View in: PubMed
    Score: 0.018
  17. Zhang T, DeSimone RA, Jiao X, Rohlf FJ, Zhu W, Gong QQ, Hunt SR, Dassopoulos T, Newberry RD, Sodergren E, Weinstock G, Robertson CE, Frank DN, Li E. Host genes related to paneth cells and xenobiotic metabolism are associated with shifts in human ileum-associated microbial composition. PLoS One. 2012; 7(6):e30044.
    View in: PubMed
    Score: 0.018
  18. Lozupone C, Faust K, Raes J, Faith JJ, Frank DN, Zaneveld J, Gordon JI, Knight R. Identifying genomic and metabolic features that can underlie early successional and opportunistic lifestyles of human gut symbionts. Genome Res. 2012 Oct; 22(10):1974-84.
    View in: PubMed
    Score: 0.018
  19. Feazel LM, Baumgartner LK, Peterson KL, Frank DN, Harris JK, Pace NR. Opportunistic pathogens enriched in showerhead biofilms. Proc Natl Acad Sci U S A. 2009 Sep 22; 106(38):16393-9.
    View in: PubMed
    Score: 0.015
  20. Feazel LM, Spear JR, Berger AB, Harris JK, Frank DN, Ley RE, Pace NR. Eucaryotic diversity in a hypersaline microbial mat. Appl Environ Microbiol. 2008 Jan; 74(1):329-32.
    View in: PubMed
    Score: 0.013
  21. Dalby AB, Frank DN, St Amand AL, Bendele AM, Pace NR. Culture-independent analysis of indomethacin-induced alterations in the rat gastrointestinal microbiota. Appl Environ Microbiol. 2006 Oct; 72(10):6707-15.
    View in: PubMed
    Score: 0.012
  22. De Groote MA, Frank DN, Dowell E, Glode MP, Pace NR. Lactobacillus rhamnosus GG bacteremia associated with probiotic use in a child with short gut syndrome. Pediatr Infect Dis J. 2005 Mar; 24(3):278-80.
    View in: PubMed
    Score: 0.011
  23. Shukla SK, Meier PR, Mitchell PD, Frank DN, Reed KD. Leptotrichia amnionii sp. nov., a novel bacterium isolated from the amniotic fluid of a woman after intrauterine fetal demise. J Clin Microbiol. 2002 Sep; 40(9):3346-9.
    View in: PubMed
    Score: 0.009
  24. Li X, Frank DN, Pace N, Zengel JM, Lindahl L. Phylogenetic analysis of the structure of RNase MRP RNA in yeasts. RNA. 2002 Jun; 8(6):740-51.
    View in: PubMed
    Score: 0.009
  25. Shukla SK, Vevea DN, Frank DN, Pace NR, Reed KD. Isolation and characterization of a black-pigmented Corynebacterium sp. from a woman with spontaneous abortion. J Clin Microbiol. 2001 Mar; 39(3):1109-13.
    View in: PubMed
    Score: 0.008
  26. Harris JK, Haas ES, Williams D, Frank DN, Brown JW. New insight into RNase P RNA structure from comparative analysis of the archaeal RNA. RNA. 2001 Feb; 7(2):220-32.
    View in: PubMed
    Score: 0.008
  27. Oh BK, Frank DN, Pace NR. Participation of the 3'-CCA of tRNA in the binding of catalytic Mg2+ ions by ribonuclease P. Biochemistry. 1998 May 19; 37(20):7277-83.
    View in: PubMed
    Score: 0.007
Connection Strength

The connection strength for concepts is the sum of the scores for each matching publication.

Publication scores are based on many factors, including how long ago they were written and whether the person is a first or senior author.

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