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Connection

Amy Palmer to Fluorescent Dyes

This is a "connection" page, showing publications Amy Palmer has written about Fluorescent Dyes.

 
Connection Strength
 
 
 
5.991
 
  1. Braselmann E, Rathbun C, Richards EM, Palmer AE. Illuminating RNA Biology: Tools for Imaging RNA in Live Mammalian Cells. Cell Chem Biol. 2020 08 20; 27(8):891-903.
    View in: PubMed
    Score: 0.585
  2. Han Y, Goldberg JM, Lippard SJ, Palmer AE. Superiority of SpiroZin2 Versus FluoZin-3 for monitoring vesicular Zn2+ allows tracking of lysosomal Zn2+ pools. Sci Rep. 2018 10 09; 8(1):15034.
    View in: PubMed
    Score: 0.518
  3. Braselmann E, Wierzba AJ, Polaski JT, Chrominski M, Holmes ZE, Hung ST, Batan D, Wheeler JR, Parker R, Jimenez R, Gryko D, Batey RT, Palmer AE. A multicolor riboswitch-based platform for imaging of RNA in live mammalian cells. Nat Chem Biol. 2018 10; 14(10):964-971.
    View in: PubMed
    Score: 0.511
  4. Sanford L, Palmer A. Recent Advances in Development of Genetically Encoded Fluorescent Sensors. Methods Enzymol. 2017; 589:1-49.
    View in: PubMed
    Score: 0.464
  5. Specht EA, Braselmann E, Palmer AE. A Critical and Comparative Review of Fluorescent Tools for Live-Cell Imaging. Annu Rev Physiol. 2017 02 10; 79:93-117.
    View in: PubMed
    Score: 0.455
  6. Dean KM, Palmer AE. Advances in fluorescence labeling strategies for dynamic cellular imaging. Nat Chem Biol. 2014 Jul; 10(7):512-23.
    View in: PubMed
    Score: 0.386
  7. Qin Y, Miranda JG, Stoddard CI, Dean KM, Galati DF, Palmer AE. Direct comparison of a genetically encoded sensor and small molecule indicator: implications for quantification of cytosolic Zn(2+). ACS Chem Biol. 2013 Nov 15; 8(11):2366-71.
    View in: PubMed
    Score: 0.364
  8. Dittmer PJ, Miranda JG, Gorski JA, Palmer AE. Genetically encoded sensors to elucidate spatial distribution of cellular zinc. J Biol Chem. 2009 Jun 12; 284(24):16289-16297.
    View in: PubMed
    Score: 0.268
  9. Palmer AE. Expanding the repertoire of fluorescent calcium sensors. ACS Chem Biol. 2009 Mar 20; 4(3):157-9.
    View in: PubMed
    Score: 0.267
  10. VanEngelenburg SB, Palmer AE. Fluorescent biosensors of protein function. Curr Opin Chem Biol. 2008 Feb; 12(1):60-5.
    View in: PubMed
    Score: 0.249
  11. Palmer AE, Tsien RY. Measuring calcium signaling using genetically targetable fluorescent indicators. Nat Protoc. 2006; 1(3):1057-65.
    View in: PubMed
    Score: 0.214
  12. Siwik SH, Wierzba AJ, Lennon SR, Olenginski LT, Palmer AE, Batey RT. Structural basis for ring-opening fluorescence by the RhoBAST RNA aptamer. Nucleic Acids Res. 2025 Jun 20; 53(12).
    View in: PubMed
    Score: 0.206
  13. Torres-Ocampo AP, Palmer AE. Genetically encoded fluorescent sensors for metals in biology. Curr Opin Chem Biol. 2023 06; 74:102284.
    View in: PubMed
    Score: 0.176
  14. Mukherjee S, Manna P, Hung ST, Vietmeyer F, Friis P, Palmer AE, Jimenez R. Directed Evolution of a Bright Variant of mCherry: Suppression of Nonradiative Decay by Fluorescence Lifetime Selections. J Phys Chem B. 2022 06 30; 126(25):4659-4668.
    View in: PubMed
    Score: 0.167
  15. Pratt EPS, Damon LJ, Anson KJ, Palmer AE. Tools and techniques for illuminating the cell biology of zinc. Biochim Biophys Acta Mol Cell Res. 2021 01; 1868(1):118865.
    View in: PubMed
    Score: 0.148
  16. Braselmann E, Palmer AE. A multicolor riboswitch-based platform for imaging of RNA in live mammalian cells. Methods Enzymol. 2020; 641:343-372.
    View in: PubMed
    Score: 0.144
  17. Lo MN, Damon LJ, Wei Tay J, Jia S, Palmer AE. Single cell analysis reveals multiple requirements for zinc in the mammalian cell cycle. Elife. 2020 02 04; 9.
    View in: PubMed
    Score: 0.142
  18. Carpenter MC, Lo MN, Palmer AE. Techniques for measuring cellular zinc. Arch Biochem Biophys. 2016 Dec 01; 611:20-29.
    View in: PubMed
    Score: 0.112
  19. Dean KM, Davis LM, Lubbeck JL, Manna P, Friis P, Palmer AE, Jimenez R. High-speed multiparameter photophysical analyses of fluorophore libraries. Anal Chem. 2015; 87(10):5026-30.
    View in: PubMed
    Score: 0.102
  20. Dean KM, Lubbeck JL, Davis LM, Regmi CK, Chapagain PP, Gerstman BS, Jimenez R, Palmer AE. Microfluidics-based selection of red-fluorescent proteins with decreased rates of photobleaching. Integr Biol (Camb). 2015 Feb; 7(2):263-73.
    View in: PubMed
    Score: 0.100
  21. Carter KP, Young AM, Palmer AE. Fluorescent sensors for measuring metal ions in living systems. Chem Rev. 2014 Apr 23; 114(8):4564-601.
    View in: PubMed
    Score: 0.094
  22. Dean KM, Qin Y, Palmer AE. Visualizing metal ions in cells: an overview of analytical techniques, approaches, and probes. Biochim Biophys Acta. 2012 Sep; 1823(9):1406-15.
    View in: PubMed
    Score: 0.083
  23. Palmer AE, Qin Y, Park JG, McCombs JE. Design and application of genetically encoded biosensors. Trends Biotechnol. 2011 Mar; 29(3):144-52.
    View in: PubMed
    Score: 0.076
  24. Van Engelenburg SB, Palmer AE. Quantification of real-time Salmonella effector type III secretion kinetics reveals differential secretion rates for SopE2 and SptP. Chem Biol. 2008 Jun; 15(6):619-28.
    View in: PubMed
    Score: 0.063
  25. Mukherjee S, Hung ST, Douglas N, Manna P, Thomas C, Ekrem A, Palmer AE, Jimenez R. Engineering of a Brighter Variant of the FusionRed Fluorescent Protein Using Lifetime Flow Cytometry and Structure-Guided Mutations. Biochemistry. 2020 10 06; 59(39):3669-3682.
    View in: PubMed
    Score: 0.037
  26. Mo GC, Ross B, Hertel F, Manna P, Yang X, Greenwald E, Booth C, Plummer AM, Tenner B, Chen Z, Wang Y, Kennedy EJ, Cole PA, Fleming KG, Palmer A, Jimenez R, Xiao J, Dedecker P, Zhang J. Genetically encoded biosensors for visualizing live-cell biochemical activity at super-resolution. Nat Methods. 2017 Apr; 14(4):427-434.
    View in: PubMed
    Score: 0.029
  27. Fiedler BL, Van Buskirk S, Carter KP, Qin Y, Carpenter MC, Palmer AE, Jimenez R. Droplet Microfluidic Flow Cytometer For Sorting On Transient Cellular Responses Of Genetically-Encoded Sensors. Anal Chem. 2017 01 03; 89(1):711-719.
    View in: PubMed
    Score: 0.029
Connection Strength

The connection strength for concepts is the sum of the scores for each matching publication.

Publication scores are based on many factors, including how long ago they were written and whether the person is a first or senior author.

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