 Connection
Thomas Perkins to DNA
This is a "connection" page, showing publications Thomas Perkins has written about DNA.
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Connection Strength |
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3.634 |
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Heenan PR, Wang X, Gooding AR, Cech TR, Perkins TT. Bending and looping of long DNA by Polycomb repressive complex 2 revealed by AFM imaging in liquid. Nucleic Acids Res. 2020 04 06; 48(6):2969-2981.
Score: 0.404
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Heenan PR, Perkins TT. Imaging DNA Equilibrated onto Mica in Liquid Using Biochemically Relevant Deposition Conditions. ACS Nano. 2019 04 23; 13(4):4220-4229.
Score: 0.376
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Carter AR, Seaberg MH, Fan HF, Sun G, Wilds CJ, Li HW, Perkins TT. Sequence-dependent nanometer-scale conformational dynamics of individual RecBCD-DNA complexes. Nucleic Acids Res. 2016 07 08; 44(12):5849-60.
Score: 0.309
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Paik DH, Roskens VA, Perkins TT. Torsionally constrained DNA for single-molecule assays: an efficient, ligation-free method. Nucleic Acids Res. 2013 Oct; 41(19):e179.
Score: 0.254
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Sullan RM, Churnside AB, Nguyen DM, Bull MS, Perkins TT. Atomic force microscopy with sub-picoNewton force stability for biological applications. Methods. 2013 Apr 01; 60(2):131-41.
Score: 0.248
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Montange RK, Bull MS, Shanblatt ER, Perkins TT. Optimizing bead size reduces errors in force measurements in optical traps. Opt Express. 2013 Jan 14; 21(1):39-48.
Score: 0.245
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Churnside AB, Sullan RM, Nguyen DM, Case SO, Bull MS, King GM, Perkins TT. Routine and timely sub-picoNewton force stability and precision for biological applications of atomic force microscopy. Nano Lett. 2012 Jul 11; 12(7):3557-61.
Score: 0.235
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Paik DH, Perkins TT. Single-molecule optical-trapping measurements with DNA anchored to an array of gold nanoposts. Methods Mol Biol. 2012; 875:335-56.
Score: 0.228
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Paik DH, Perkins TT. Dynamics and multiple stable binding modes of DNA intercalators revealed by single-molecule force spectroscopy. Angew Chem Int Ed Engl. 2012 Feb 20; 51(8):1811-5.
Score: 0.227
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Paik DH, Seol Y, Halsey WA, Perkins TT. Integrating a high-force optical trap with gold nanoposts and a robust gold-DNA bond. Nano Lett. 2009 Aug; 9(8):2978-83.
Score: 0.192
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Carter AR, Seol Y, Perkins TT. Precision surface-coupled optical-trapping assay with one-basepair resolution. Biophys J. 2009 Apr 08; 96(7):2926-34.
Score: 0.188
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Perkins TT, Li HW, Dalal RV, Gelles J, Block SM. Forward and reverse motion of single RecBCD molecules on DNA. Biophys J. 2004 Mar; 86(3):1640-8.
Score: 0.132
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Perkins TT, Dalal RV, Mitsis PG, Block SM. Sequence-dependent pausing of single lambda exonuclease molecules. Science. 2003 Sep 26; 301(5641):1914-8.
Score: 0.128
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Taylor AMK, Okoniewski SR, Uyetake L, Perkins TT. Force-Activated DNA Substrates for In Situ Generation of ssDNA and Designed ssDNA/dsDNA Structures in an Optical-Trapping Assay. Methods Mol Biol. 2022; 2478:273-312.
Score: 0.114
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Okoniewski SR, Uyetake L, Perkins TT. Force-activated DNA substrates for probing individual proteins interacting with single-stranded DNA. Nucleic Acids Res. 2017 Oct 13; 45(18):10775-10782.
Score: 0.085
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Perkins TT, Smith DE, Larson RG, Chu S. Stretching of a single tethered polymer in a uniform flow. Science. 1995 Apr 07; 268(5207):83-7.
Score: 0.071
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Perkins TT. Ångström-precision optical traps and applications. Annu Rev Biophys. 2014; 43:279-302.
Score: 0.065
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Perkins TT, Li HW. Single-molecule studies of RecBCD. Methods Mol Biol. 2010; 587:155-72.
Score: 0.050
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Seol Y, Li J, Nelson PC, Perkins TT, Betterton MD. Elasticity of short DNA molecules: theory and experiment for contour lengths of 0.6-7 microm. Biophys J. 2007 Dec 15; 93(12):4360-73.
Score: 0.042
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Hieb AR, Halsey WA, Betterton MD, Perkins TT, Kugel JF, Goodrich JA. TFIIA changes the conformation of the DNA in TBP/TATA complexes and increases their kinetic stability. J Mol Biol. 2007 Sep 21; 372(3):619-32.
Score: 0.042
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Connection Strength
The connection strength for concepts is the sum of the scores for each matching publication.
Publication scores are based on many factors, including how long ago they were written and whether the person is a first or senior author.
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