 Connection
Mair Churchill to Molecular Sequence Data
This is a "connection" page, showing publications Mair Churchill has written about Molecular Sequence Data.
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Connection Strength |
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1.119 |
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Razzaghi H, Tempczyk-Russell A, Haubold K, Santorico SA, Shokati T, Christians U, Churchill ME. Genetic and structure-function studies of missense mutations in human endothelial lipase. PLoS One. 2013; 8(3):e55716.
Score: 0.073
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Malarkey CS, Churchill ME. The high mobility group box: the ultimate utility player of a cell. Trends Biochem Sci. 2012 Dec; 37(12):553-62.
Score: 0.071
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Malarkey CS, Bestwick M, Kuhlwilm JE, Shadel GS, Churchill ME. Transcriptional activation by mitochondrial transcription factor A involves preferential distortion of promoter DNA. Nucleic Acids Res. 2012 Jan; 40(2):614-24.
Score: 0.066
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Lintz MJ, Oinuma K, Wysoczynski CL, Greenberg EP, Churchill ME. Crystal structure of QscR, a Pseudomonas aeruginosa quorum sensing signal receptor. Proc Natl Acad Sci U S A. 2011 Sep 20; 108(38):15763-8.
Score: 0.066
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Churchill MEA, Klass J, Zoetewey DL. Structural analysis of HMGD-DNA complexes reveals influence of intercalation on sequence selectivity and DNA bending. J Mol Biol. 2010 Oct 15; 403(1):88-102.
Score: 0.061
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Das C, Tyler JK, Churchill ME. The histone shuffle: histone chaperones in an energetic dance. Trends Biochem Sci. 2010 Sep; 35(9):476-89.
Score: 0.060
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Gangelhoff TA, Mungalachetty PS, Nix JC, Churchill ME. Structural analysis and DNA binding of the HMG domains of the human mitochondrial transcription factor A. Nucleic Acids Res. 2009 Jun; 37(10):3153-64.
Score: 0.055
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Roemer SC, Donham DC, Sherman L, Pon VH, Edwards DP, Churchill ME. Structure of the progesterone receptor-deoxyribonucleic acid complex: novel interactions required for binding to half-site response elements. Mol Endocrinol. 2006 Dec; 20(12):3042-52.
Score: 0.046
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Kirwan JP, Gould TA, Schweizer HP, Bearden SW, Murphy RC, Churchill ME. Quorum-sensing signal synthesis by the Yersinia pestis acyl-homoserine lactone synthase YspI. J Bacteriol. 2006 Jan; 188(2):784-8.
Score: 0.044
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Gould TA, Schweizer HP, Churchill ME. Structure of the Pseudomonas aeruginosa acyl-homoserinelactone synthase LasI. Mol Microbiol. 2004 Aug; 53(4):1135-46.
Score: 0.040
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Gould TA, Watson WT, Choi KH, Schweizer HP, Churchill ME. Crystallization of Pseudomonas aeruginosa AHL synthase LasI using beta-turn crystal engineering. Acta Crystallogr D Biol Crystallogr. 2004 Mar; 60(Pt 3):518-20.
Score: 0.039
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Klass J, Murphy FV, Fouts S, Serenil M, Changela A, Siple J, Churchill ME. The role of intercalating residues in chromosomal high-mobility-group protein DNA binding, bending and specificity. Nucleic Acids Res. 2003 Jun 01; 31(11):2852-64.
Score: 0.037
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Watson WT, Minogue TD, Val DL, von Bodman SB, Churchill ME. Structural basis and specificity of acyl-homoserine lactone signal production in bacterial quorum sensing. Mol Cell. 2002 Mar; 9(3):685-94.
Score: 0.034
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Scavetta RD, Thomas CB, Walsh MA, Szegedi S, Joachimiak A, Gumport RI, Churchill ME. Structure of RsrI methyltransferase, a member of the N6-adenine beta class of DNA methyltransferases. Nucleic Acids Res. 2000 Oct 15; 28(20):3950-61.
Score: 0.031
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Dow LK, Jones DN, Wolfe SA, Verdine GL, Churchill ME. Structural studies of the high mobility group globular domain and basic tail of HMG-D bound to disulfide cross-linked DNA. Biochemistry. 2000 Aug 15; 39(32):9725-36.
Score: 0.030
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Murphy FV, Sweet RM, Churchill ME. The structure of a chromosomal high mobility group protein-DNA complex reveals sequence-neutral mechanisms important for non-sequence-specific DNA recognition. EMBO J. 1999 Dec 01; 18(23):6610-8.
Score: 0.029
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Churchill ME, Changela A, Dow LK, Krieg AJ. Interactions of high mobility group box proteins with DNA and chromatin. Methods Enzymol. 1999; 304:99-133.
Score: 0.027
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Malarkey CS, Lionetti C, Deceglie S, Roberti M, Churchill ME, Cantatore P, Loguercio Polosa P. The sea urchin mitochondrial transcription factor A binds and bends DNA efficiently despite its unusually short C-terminal tail. Mitochondrion. 2016 07; 29:1-6.
Score: 0.023
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Sánchez-Giraldo R, Acosta-Reyes FJ, Malarkey CS, Saperas N, Churchill ME, Campos JL. Two high-mobility group box domains act together to underwind and kink DNA. Acta Crystallogr D Biol Crystallogr. 2015 Jul; 71(Pt 7):1423-32.
Score: 0.021
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Churchill ME, Jones DN, Glaser T, Hefner H, Searles MA, Travers AA. HMG-D is an architecture-specific protein that preferentially binds to DNA containing the dinucleotide TG. EMBO J. 1995 Mar 15; 14(6):1264-75.
Score: 0.021
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Churchill ME, Stura EA, Pinilla C, Appel JR, Houghten RA, Kono DH, Balderas RS, Fieser GG, Schulze-Gahmen U, Wilson IA. Crystal structure of a peptide complex of anti-influenza peptide antibody Fab 26/9. Comparison of two different antibodies bound to the same peptide antigen. J Mol Biol. 1994 Aug 26; 241(4):534-56.
Score: 0.020
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Churchill ME, Gemmell MA, Woloschak GE. Detection of retinoblastoma gene deletions in spontaneous and radiation-induced mouse lung adenocarcinomas by polymerase chain reaction. Radiat Res. 1994 Mar; 137(3):310-6.
Score: 0.019
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Dennehey BK, Noone S, Liu WH, Smith L, Churchill ME, Tyler JK. The C terminus of the histone chaperone Asf1 cross-links to histone H3 in yeast and promotes interaction with histones H3 and H4. Mol Cell Biol. 2013 Feb; 33(3):605-21.
Score: 0.018
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Hill KK, Roemer SC, Churchill ME, Edwards DP. Structural and functional analysis of domains of the progesterone receptor. Mol Cell Endocrinol. 2012 Jan 30; 348(2):418-29.
Score: 0.016
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Churchill ME, Travers AA. Protein motifs that recognize structural features of DNA. Trends Biochem Sci. 1991 Mar; 16(3):92-7.
Score: 0.016
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Pascreau G, Churchill ME, Maller JL. Centrosomal localization of cyclins E and A: structural similarities and functional differences. Cell Cycle. 2011 Jan 15; 10(2):199-205.
Score: 0.016
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Churchill ME, Hayes JJ, Tullius TD. Detection of drug binding to DNA by hydroxyl radical footprinting. Relationship of distamycin binding sites to DNA structure and positioned nucleosomes on 5S RNA genes of Xenopus. Biochemistry. 1990 Jun 26; 29(25):6043-50.
Score: 0.015
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Churchill ME, Suzuki M. 'SPKK' motifs prefer to bind to DNA at A/T-rich sites. EMBO J. 1989 Dec 20; 8(13):4189-95.
Score: 0.015
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Khan SR, Herman J, Krank J, Serkova NJ, Churchill ME, Suga H, Farrand SK. N-(3-hydroxyhexanoyl)-l-homoserine lactone is the biologically relevant quormone that regulates the phz operon of Pseudomonas chlororaphis strain 30-84. Appl Environ Microbiol. 2007 Nov; 73(22):7443-55.
Score: 0.013
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Kao DJ, Churchill ME, Irvin RT, Hodges RS. Animal protection and structural studies of a consensus sequence vaccine targeting the receptor binding domain of the type IV pilus of Pseudomonas aeruginosa. J Mol Biol. 2007 Nov 23; 374(2):426-42.
Score: 0.012
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Eyers PA, Churchill ME, Maller JL. The Aurora A and Aurora B protein kinases: a single amino acid difference controls intrinsic activity and activation by TPX2. Cell Cycle. 2005 Jun; 4(6):784-9.
Score: 0.011
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Dragan AI, Read CM, Makeyeva EN, Milgotina EI, Churchill ME, Crane-Robinson C, Privalov PL. DNA binding and bending by HMG boxes: energetic determinants of specificity. J Mol Biol. 2004 Oct 15; 343(2):371-93.
Score: 0.010
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Melvin VS, Harrell C, Adelman JS, Kraus WL, Churchill M, Edwards DP. The role of the C-terminal extension (CTE) of the estrogen receptor alpha and beta DNA binding domain in DNA binding and interaction with HMGB. J Biol Chem. 2004 Apr 09; 279(15):14763-71.
Score: 0.010
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Dragan AI, Klass J, Read C, Churchill ME, Crane-Robinson C, Privalov PL. DNA binding of a non-sequence-specific HMG-D protein is entropy driven with a substantial non-electrostatic contribution. J Mol Biol. 2003 Aug 22; 331(4):795-813.
Score: 0.009
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Melvin VS, Roemer SC, Churchill ME, Edwards DP. The C-terminal extension (CTE) of the nuclear hormone receptor DNA binding domain determines interactions and functional response to the HMGB-1/-2 co-regulatory proteins. J Biol Chem. 2002 Jul 12; 277(28):25115-24.
Score: 0.009
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Kuo MH, Zhou J, Jambeck P, Churchill ME, Allis CD. Histone acetyltransferase activity of yeast Gcn5p is required for the activation of target genes in vivo. Genes Dev. 1998 Mar 01; 12(5):627-39.
Score: 0.006
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Balaeff A, Churchill ME, Schulten K. Structure prediction of a complex between the chromosomal protein HMG-D and DNA. Proteins. 1998 Feb 01; 30(2):113-35.
Score: 0.006
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Lampe DJ, Churchill ME, Robertson HM. A purified mariner transposase is sufficient to mediate transposition in vitro. EMBO J. 1996 Oct 01; 15(19):5470-9.
Score: 0.006
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Jones DN, Searles MA, Shaw GL, Churchill ME, Ner SS, Keeler J, Travers AA, Neuhaus D. The solution structure and dynamics of the DNA-binding domain of HMG-D from Drosophila melanogaster. Structure. 1994 Jul 15; 2(7):609-27.
Score: 0.005
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Ner SS, Churchill ME, Searles MA, Travers AA. dHMG-Z, a second HMG-1-related protein in Drosophila melanogaster. Nucleic Acids Res. 1993 Sep 11; 21(18):4369-71.
Score: 0.005
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Guo Q, Lu M, Churchill ME, Tullius TD, Kallenbach NR. Asymmetric structure of a three-arm DNA junction. Biochemistry. 1990 Dec 11; 29(49):10927-34.
Score: 0.004
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Vrana KE, Churchill ME, Tullius TD, Brown DD. Mapping functional regions of transcription factor TFIIIA. Mol Cell Biol. 1988 Apr; 8(4):1684-96.
Score: 0.003
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Connection Strength
The connection strength for concepts is the sum of the scores for each matching publication.
Publication scores are based on many factors, including how long ago they were written and whether the person is a first or senior author.
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