Hierarchical hidden Markov model with application to joint analysis of ChIP-chip and ChIP-seq data.
Choi H, Nesvizhskii AI, Ghosh D, Qin ZS. Hierarchical hidden Markov model with application to joint analysis of ChIP-chip and ChIP-seq data. Bioinformatics. 2009 Jul 15; 25(14):1715-21.