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Andrew Noel Bubak

TitleAssistant Professor
InstitutionUniversity of Colorado Denver - Anschutz Medical Campus
DepartmentSOM-NEUR General Operations
Phone303/724-3730

    Collapse Research 
    Collapse research activities and funding
    R01AG085406     (BUBAK, ANDREW N)Sep 20, 2024 - Jul 31, 2029
    NIH
    Pathogenic exosomes during herpes zoster mediate increased vascular dementia risk
    Role: Principal Investigator
    R21AI176110     (BUBAK, ANDREW N)Jun 20, 2024 - Apr 30, 2026
    NIH
    Remote cellular reprogramming by non-infectious, pathogenic varicella zoster virus exosomes
    Role: Principal Investigator

    Collapse Bibliographic 
    Collapse selected publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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    1. Abe K, Abe S, Bronner C, Hayato Y, Hiraide K, Hosokawa K, Ieki K, Ikeda M, Kameda J, Kanemura Y, Kaneshima R, Kashiwagi Y, Kataoka Y, Miki S, Mine S, Miura M, Moriyama S, Nakahata M, Nakano Y, Nakayama S, Noguchi Y, Sato K, Sekiya H, Shiba H, Shimizu K, Shiozawa M, Sonoda Y, Suzuki Y, Takeda A, Takemoto Y, Tanaka H, Yano T, Han S, Kajita T, Okumura K, Tashiro T, Tomiya T, Wang X, Yoshida S, Fernandez P, Labarga L, Ospina N, Zaldivar B, Pointon BW, Kearns E, Mirabito J, Raaf JL, Wan L, Wester T, Bian J, Griskevich NJ, Smy MB, Sobel HW, Takhistov V, Yankelevich A, Hill J, Jang MC, Lee SH, Moon DH, Park RG, Bodur B, Scholberg K, Walter CW, Beauch?ne A, Drapier O, Giampaolo A, Mueller TA, Santos AD, Paganini P, Quilain B, Rogly R, Nakamura T, Jang JS, Machado LN, Learned JG, Choi K, Iovine N, Cao S, Anthony LHV, Martin D, Prouse NW, Scott M, Uchida Y, Berardi V, Calabria NF, Catanesi MG, Radicioni E, Langella A, De Rosa G, Collazuol G, Feltre M, Iacob F, Mattiazzi M, Ludovici L, Gonin M, P?riss? L, Pronost G, Fujisawa C, Horiuchi S, Kobayashi M, Liu YM, Maekawa Y, Nishimura Y, Okazaki R, Akutsu R, Friend M, Hasegawa T, Ishida T, Kobayashi T, Jakkapu M, Matsubara T, Nakadaira T, Nakamura K, Oyama Y, Portocarrero Yrey A, Sakashita K, Sekiguchi T, Tsukamoto T, Bhuiyan N, Burton GT, Di Lodovico F, Gao J, Goldsack A, Katori T, Migenda J, Ramsden RM, Xie Z, Zsoldos S, Suzuki AT, Takagi Y, Takeuchi Y, Zhong H, Feng J, Feng L, Hu JR, Hu Z, Kawaue M, Kikawa T, Mori M, Nakaya T, Wendell RA, Yasutome K, Jenkins SJ, McCauley N, Mehta P, Tarrant A, Wilking MJ, Fukuda Y, Itow Y, Menjo H, Ninomiya K, Yoshioka Y, Lagoda J, Mandal M, Mijakowski P, Prabhu YS, Zalipska J, Jia M, Jiang J, Shi W, Yanagisawa C, Harada M, Hino Y, Ishino H, Koshio Y, Nakanishi F, Sakai S, Tada T, Tano T, Ishizuka T, Barr G, Barrow D, Cook L, Samani S, Wark D, Holin A, Nova F, Jung S, Yang BS, Yang JY, Yoo J, Fannon JEP, Kneale L, Malek M, McElwee JM, Thiesse MD, Thompson LF, Wilson ST, Okazawa H, Lakshmi SM, Kim SB, Kwon E, Seo JW, Yu I, Ichikawa AK, Nakamura KD, Tairafune S, Nishijima K, Eguchi A, Nakagiri K, Nakajima Y, Shima S, Taniuchi N, Watanabe E, Yokoyama M, de Perio P, Fujita S, Jes?s-Valls C, Martens K, Tsui KM, Vagins MR, Xia J, Izumiyama S, Kuze M, Matsumoto R, Terada K, Asaka R, Ishitsuka M, Ito H, Ommura Y, Shigeta N, Shinoki M, Yamauchi K, Yoshida T, Gaur R, Gousy-Leblanc V, Hartz M, Konaka A, Li X, Chen S, Xu BD, Wu Y, Zhang AQ, Zhang B, Posiadala-Zezula M, Boyd SB, Edwards R, Hadley D, Nicholson M, O'Flaherty M, Richards B, Ali A, Jamieson B, Amanai S, Marti L, Minamino A, Shibayama R, Shimamura R, Suzuki S, Abe K, Abe S, Akhlaq N, Akutsu R, Alarakia-Charles H, Ali A, Alj Hakim YI, Alonso Monsalve S, Andreopoulos C, Anthony L, Antonova M, Aoki S, Apte KA, Arai T, Arihara T, Arimoto S, Asada Y, Ashida Y, Atkin ET, Babu N, Barbi M, Barker GJ, Barr G, Barrow D, Bates P, Batkiewicz-Kwasniak M, Berardi V, Berns L, Bhadra S, Blanchet A, Blondel A, Bolognesi S, Bordoni S, Boyd SB, Bravar A, Bronner C, Bubak A, Buizza Avanzini M, Caballero JA, Calabria NF, Cao S, Carabadjac D, Carter AJ, Cartwright SL, Casado MP, Catanesi MG, Cervera A, Chakrani J, Chalumeau A, Cherdack D, Chong PS, Chvirova A, Cicerchia M, Coleman J, Collazuol G, Cook L, Cormier F, Cudd A, D'ago D, Dalmazzone C, Daret T, Dasgupta P, Davis C, Davydov YI, De Roeck A, De Rosa G, Dealtry T, Delogu CC, Densham C, Dergacheva A, Dharmapal R, Di Lodovico F, Diaz Lopez G, Dolan S, Douqa D, Doyle TA, Drapier O, Duffy KE, Dumarchez J, Dunne P, Dygnarowicz K, Eguchi A, Elias J, Emery-Schrenk S, Erofeev G, Ershova A, Eurin G, Fedorova D, Fedotov S, Feltre M, Feng L, Ferlewicz D, Finch AJ, Fiorentini Aguirre GA, Fiorillo G, Fitton MD, Franco Pati?o JM, Friend M, Fujii Y, Fukuda Y, Furui Y, Giannessi L, Giganti C, Glagolev V, Gonin M, Gonz?lez Rosa J, Goodman EAG, Gorin A, Gorshanov K, Grassi M, Guigue M, Hadley DR, Haigh JT, Han S, Harris DA, Hartz M, Hasegawa T, Hassani S, Hastings NC, Hayato Y, et al. First Joint Oscillation Analysis of Super-Kamiokande Atmospheric and T2K Accelerator Neutrino Data. Phys Rev Lett. 2025 Jan 10; 134(1):011801. PMID: 39913709.
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    2. Niemeyer CS, Merle L, Bubak AN, Baxter BD, Gentile Polese A, Colon-Reyes K, Vang S, Hassell JE, Bruce KD, Nagel MA, Restrepo D. Olfactory and trigeminal routes of HSV-1 CNS infection with regional microglial heterogeneity. J Virol. 2024 Nov 19; 98(11):e0096824. PMID: 39475273.
      View in: PubMed
    3. Niemeyer CS, Merle L, Bubak AN, Dnate' Baxter B, Polese AG, Colon-Reyes K, Vang S, Hassell JE, Bruce KD, Nagel MA, Restrepo D. Olfactory and Trigeminal Routes of HSV-1 CNS Infection with Regional Microglial Heterogeneity. bioRxiv. 2024 Sep 23. PMID: 39386674.
      View in: PubMed
    4. Arumugam I, Rajasekaran SS, Gopalakrishnan K, Gnanaskandan S, Jeganathan SN, Athi J, Shanmugaraj R, Ramesh R, Shankar V, Krishnasamy K, Ranganathan LN, Balakrishnan U, Mahalingam R, Bubak AN, Nagel MA, Srikanth P. Diagnostic value of anti-VZV IgG in neurological diseases among varicella unvaccinated individuals. J Neurovirol. 2024 06; 30(3):327-335. PMID: 39085748.
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    5. Niemeyer CS, Frietze S, Coughlan C, Lewis SWR, Bustos Lopez S, Saviola AJ, Hansen KC, Medina EM, Hassell JE, Kogut S, Traina-Dorge V, Nagel MA, Bruce KD, Restrepo D, Mahalingam R, Bubak AN. Suppression of the host antiviral response by non-infectious varicella zoster virus extracellular vesicles. J Virol. 2024 Aug 20; 98(8):e0084824. PMID: 39051773.
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    6. Niemeyer CS, Traina-Dorge V, Doyle-Meyers L, Das A, Looper J, Mescher T, Feia B, Medina E, Nagel MA, Mahalingam R, Bubak AN. Simian varicella virus infection and reactivation in rhesus macaques trigger cytokine and A?40/42 alterations in serum and cerebrospinal fluid. J Neurovirol. 2024 02; 30(1):86-99. PMID: 38453879.
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    7. Niemeyer CS, Harlander-Locke M, Bubak AN, Rzasa-Lynn R, Birlea M. Trigeminal Postherpetic Neuralgia: From Pathophysiology to Treatment. Curr Pain Headache Rep. 2024 Apr; 28(4):295-306. PMID: 38261232.
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    8. Darragh LB, Knitz MM, Hu J, Clambey ET, Backus J, Dumit A, Samedi V, Bubak A, Greene C, Waxweiler T, Mehrotra S, Bhatia S, Gadwa J, Bickett T, Piper M, Fakhoury K, Liu A, Petit J, Bowles D, Thaker A, Atiyeh K, Goddard J, Hoyer R, Van Bokhoven A, Jordan K, Jimeno A, D'Alessandro A, Raben D, McDermott JD, Karam SD. Publisher Correction: A phase I/Ib trial and biological correlate analysis of neoadjuvant SBRT with single-dose durvalumab in HPV-unrelated locally advanced HNSCC. Nat Cancer. 2024 Jan; 5(1):210. PMID: 38200246.
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    9. Niemeyer CS, Traina-Dorge V, Doyle-Meyers L, Das A, Looper J, Mescher T, Feia B, Medina E, Nagel MA, Mahalingam R, Bubak AN. Simian Varicella Virus Infection and Reactivation in Rhesus Macaques Trigger Cytokine and A?40/42 Alterations in Serum and Cerebrospinal Fluid. Res Sq. 2023 Oct 16. PMID: 37886544.
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    10. Bubak AN, Coughlan C, Posey J, Saviola AJ, Niemeyer CS, Lewis SWR, Lopez SB, Solano A, Tyring SK, Delaney C, Neeves KB, Mahalingam R, Hansen KC, Nagel MA. Zoster-Associated Prothrombotic Plasma Exosomes and Increased Stroke Risk. J Infect Dis. 2023 04 18; 227(8):993-1001. PMID: 36200236.
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    11. Zhou W, Graner M, Paucek P, Beseler C, Boisen M, Bubak A, Asturias F, George W, Graner A, Ormond D, Vollmer T, Alvarez E, Yu X. Multiple sclerosis plasma IgG aggregates induce complement-dependent neuronal apoptosis. Cell Death Dis. 2023 04 08; 14(4):254. PMID: 37031195.
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    12. Darragh LB, Knitz MM, Hu J, Clambey ET, Backus J, Dumit A, Samedi V, Bubak A, Greene C, Waxweiler T, Mehrotra S, Bhatia S, Gadwa J, Bickett T, Piper M, Fakhoury K, Liu A, Petit J, Bowles D, Thaker A, Atiyeh K, Goddard J, Hoyer R, Van Bokhoven A, Jordan K, Jimeno A, D'Alessandro A, Raben D, McDermott JD, Karam SD. Author Correction: A phase I/Ib trial and biological correlate analysis of neoadjuvant SBRT with single-dose durvalumab in HPV-unrelated locally advanced HNSCC. Nat Cancer. 2023 Jan; 4(1):148. PMID: 36577897.
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    13. Bubak AN, Merle L, Niemeyer CS, Baxter BD, Gentile Polese A, Ramakrishnan V, Gomez J, Madrigal L, Villegas-Lanau A, Lopera F, Macklin W, Frietze S, Nagel MA, Restrepo D. Signatures for viral infection and inflammation in the proximal olfactory system in familial Alzheimer's disease. Neurobiol Aging. 2023 03; 123:75-82. PMID: 36638683.
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    14. Darragh LB, Knitz MM, Hu J, Clambey ET, Backus J, Dumit A, Samedi V, Bubak A, Greene C, Waxweiler T, Mehrotra S, Bhatia S, Gadwa J, Bickett T, Piper M, Fakhoury K, Liu A, Petit J, Bowles D, Thaker A, Atiyeh K, Goddard J, Hoyer R, Van Bokhoven A, Jordan K, Jimeno A, D'Alessandro A, Raben D, McDermott JD, Karam SD. A phase I/Ib trial and biological correlate analysis of neoadjuvant SBRT with single-dose durvalumab in HPV-unrelated locally advanced HNSCC. Nat Cancer. 2022 11; 3(11):1300-1317. PMID: 36434392.
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    15. Mahalingam R, Feia B, Coleman C, Anupindi K, Saravanan P, Luthens A, Bustillos A, Das A, de Haro E, Doyle-Meyers L, Looper J, Bubak AN, Niemeyer CS, Palmer B, Nagel MA, Traina-Dorge V. Simian Varicella Virus Pathogenesis in Skin during Varicella and Zoster. Viruses. 2022 05 27; 14(6). PMID: 35746639.
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    16. Niemeyer CS, Mescher T, Bubak AN, Medina EM, Hassell JE, Nagel MA. VZV Infection of Primary Human Adrenal Cortical Cells Produces a Proinflammatory Environment without Cell Death. Viruses. 2022 03 25; 14(4). PMID: 35458404.
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    17. Sarkar L, Oko L, Gupta S, Bubak AN, Das B, Gupta P, Safiriyu AA, Singhal C, Neogi U, Bloom D, Banerjee A, Mahalingam R, Cohrs RJ, Koval M, Shindler KS, Pal D, Nagel M, Sarma JD. Azadirachta indica A. Juss bark extract and its Nimbin isomers restrict ?-coronaviral infection and replication. Virology. 2022 04; 569:13-28. PMID: 35219218.
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    18. Bubak AN, Como CN, Hassell JE, Mescher T, Frietze SE, Niemeyer CS, Cohrs RJ, Nagel MA. Targeted RNA Sequencing of VZV-Infected Brain Vascular Adventitial Fibroblasts Indicates That Amyloid May Be Involved in VZV Vasculopathy. Neurol Neuroimmunol Neuroinflamm. 2022 01; 9(1). PMID: 34759019.
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    19. Bubak AN, Mescher T, Mariani M, Frietze SE, Hassell JE, Niemeyer CS, Como CN, Burnet AM, Subramanian PS, Cohrs RJ, Mahalingam R, Nagel MA. Targeted RNA Sequencing of Formalin-Fixed, Paraffin-Embedded Temporal Arteries From Giant Cell Arteritis Cases Reveals Viral Signatures. Neurol Neuroimmunol Neuroinflamm. 2021 11; 8(6). PMID: 34493606.
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    20. Niemeyer CS, Mescher T, Griggs R, Orlicky DJ, Wilkerson GK, Bubak AN, Hassell JE, Feia B, Mahalingam R, Traina-Dorge V, Nagel MA. Histopathological Analysis of Adrenal Glands after Simian Varicella Virus Infection. Viruses. 2021 06 26; 13(7). PMID: 34206909.
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    21. Hudish LI, Bubak A, Triolo TM, Niemeyer CS, Lorberbaum DS, Sussel L, Nagel M, Taliaferro JM, Russ HA. Modeling Hypoxia-Induced Neuropathies Using a Fast and Scalable Human Motor Neuron Differentiation System. Stem Cell Reports. 2021 Apr 13; 16(4):1009. PMID: 33852882.
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    22. Bubak AN, Beseler C, Como CN, Coughlan CM, Johnson NR, Hassell JE, Burnet AM, Mescher T, Schmid DS, Coleman C, Mahalingam R, Cohrs RJ, Boyd TD, Potter H, Shilleh AH, Russ HA, Nagel MA. Amylin, A?42, and Amyloid in Varicella Zoster Virus Vasculopathy Cerebrospinal Fluid and Infected Vascular Cells. J Infect Dis. 2021 04 08; 223(7):1284-1294. PMID: 32809013.
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    23. Baxter BD, Larson ED, Merle L, Feinstein P, Polese AG, Bubak AN, Niemeyer CS, Hassell J, Shepherd D, Ramakrishnan VR, Nagel MA, Restrepo D. Transcriptional profiling reveals potential involvement of microvillous TRPM5-expressing cells in viral infection of the olfactory epithelium. BMC Genomics. 2021 Mar 30; 22(1):224. PMID: 33781205.
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    24. Mescher T, Boyer PJ, Bubak AN, Hassell JE, Nagel MA. Detection of varicella zoster virus antigen and DNA in two cases of cerebral amyloid angiopathy. J Neurol Sci. 2021 Mar 15; 422:117315. PMID: 33503519.
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    25. Baxter BD, Larson ED, Merle L, Feinstein P, Polese AG, Bubak AN, Niemeyer CS, Hassell J, Shepherd D, Ramakrishnan VR, Nagel MA, Restrepo D. Transcriptional profiling reveals potential involvement of microvillous TRPM5-expressing cells in viral infection of the olfactory epithelium. bioRxiv. 2020 Dec 01. PMID: 32511400.
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    26. Bubak AN, Traina-Dorge V, Como CN, Feia B, Pearce CM, Doyle-Meyers L, Das A, Looper J, Mahalingam R, Nagel MA. Elevated serum substance P during simian varicella virus infection in rhesus macaques: implications for chronic inflammation and adverse cerebrovascular events. J Neurovirol. 2020 12; 26(6):945-951. PMID: 32964407.
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    27. Nagel MA, Niemeyer CS, Bubak AN. Central nervous system infections produced by varicella zoster virus. Curr Opin Infect Dis. 2020 06; 33(3):273-278. PMID: 32332223.
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    28. Bubak AN, Beseler C, Como CN, Tyring SK, Haley C, Mescher T, Hassell JE, Cohrs RJ, Potter H, Nagel MA. Acute zoster plasma contains elevated amyloid, correlating with A?42 and amylin levels, and is amyloidogenic. J Neurovirol. 2020 06; 26(3):422-428. PMID: 32385803.
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    29. Hudish LI, Bubak A, Triolo TM, Niemeyer CS, Lorberbaum DS, Sussel L, Nagel M, Taliaferro JM, Russ HA. Modeling Hypoxia-Induced Neuropathies Using a Fast and Scalable Human Motor Neuron Differentiation System. Stem Cell Reports. 2020 06 09; 14(6):1033-1043. PMID: 32386561.
      View in: PubMed
    30. Bubak AN, Como CN, Coughlan CM, Johnson NR, Hassell JE, Mescher T, Niemeyer CS, Mahalingam R, Cohrs RJ, Boyd TD, Potter H, Russ HA, Nagel MA. Varicella-Zoster Virus Infection of Primary Human Spinal Astrocytes Produces Intracellular Amylin, Amyloid-?, and an Amyloidogenic Extracellular Environment. J Infect Dis. 2020 03 16; 221(7):1088-1097. PMID: 31665341.
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    31. Bubak AN, Watt MJ, Yaeger JDW, Renner KJ, Swallow JG. The stalk-eyed fly as a model for aggression - is there a conserved role for 5-HT between vertebrates and invertebrates? J Exp Biol. 2020 01 02; 223(Pt 1). PMID: 31896721.
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    32. Blackmon AM, Como CN, Bubak AN, Mescher T, Jones D, Nagel MA. Varicella Zoster Virus Alters Expression of Cell Adhesion Proteins in Human Perineurial Cells via Interleukin 6. J Infect Dis. 2019 09 26; 220(9):1453-1461. PMID: 30835269.
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    33. Nagel MA, Bubak AN. Herpes Zoster, a Rash of Cerebrovascular Events. Mayo Clin Proc. 2019 05; 94(5):742-744. PMID: 31054599.
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    34. Jones D, Como CN, Jing L, Blackmon A, Neff CP, Krueger O, Bubak AN, Palmer BE, Koelle DM, Nagel MA. Varicella zoster virus productively infects human peripheral blood mononuclear cells to modulate expression of immunoinhibitory proteins and blocking PD-L1 enhances virus-specific CD8+ T cell effector function. PLoS Pathog. 2019 03; 15(3):e1007650. PMID: 30870532.
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    35. Como CN, Bubak AN, Blackmon AM, Jones D, Mueller NH, Davidson R, Nagel MA. Varicella Zoster Virus Induces Differential Cell-Type Specific Responses in Human Corneal Epithelial Cells and Keratocytes. Invest Ophthalmol Vis Sci. 2019 02 01; 60(2):704-711. PMID: 30786281.
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    36. Bubak AN, Watt MJ, Renner KJ, Luman AA, Costabile JD, Sanders EJ, Grace JL, Swallow JG. Sex differences in aggression: Differential roles of 5-HT2, neuropeptide F and tachykinin. PLoS One. 2019; 14(1):e0203980. PMID: 30695038.
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    37. Bubak AN, Como CN, Blackmon AM, Jones D, Nagel MA. Varicella zoster virus differentially alters morphology and suppresses proinflammatory cytokines in primary human spinal cord and hippocampal astrocytes. J Neuroinflammation. 2018 Nov 15; 15(1):318. PMID: 30442152.
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    38. Nagel MA, Bubak AN. Varicella Zoster Virus Vasculopathy. J Infect Dis. 2018 09 22; 218(suppl_2):S107-S112. PMID: 30247600.
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    39. Bubak AN, Como CN, Blackmon AM, Frietze S, Mescher T, Jones D, Cohrs RJ, Paucek P, Baird NL, Nagel MA. Varicella Zoster Virus Induces Nuclear Translocation of the Neurokinin-1 Receptor, Promoting Lamellipodia Formation and Viral Spread in Spinal Astrocytes. J Infect Dis. 2018 09 08; 218(8):1324-1335. PMID: 29788447.
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    40. Bubak AN, Yaeger JD, Renner KJ, Swallow JG, Greene MJ. Neuromodulation of Nestmate Recognition Decisions by Pavement Ants. PLoS One. 2016; 11(11):e0166417. PMID: 27846261.
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    41. Swallow JG, Bubak AN, Grace JL. The role of monoamines in modulating behavior. Curr Zool. 2016 Jun; 62(3):253-255. PMID: 29491912.
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    42. Hoover KM, Bubak AN, Law IJ, Yaeger JDW, Renner KJ, Swallow JG, Greene MJ. The organization of societal conflicts by pavement ants Tetramorium caespitum: an agent-based model of amine-mediated decision making. Curr Zool. 2016 Jun; 62(3):277-284. PMID: 29491915.
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    43. Bubak AN, Gerken AR, Watt MJ, Costabile JD, Renner KJ, Swallow JG. Assessment strategies and fighting patterns in animal contests: a role for serotonin? Curr Zool. 2016 Jun; 62(3):257-263. PMID: 29491913.
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    44. Bubak AN, Rieger NS, Watt MJ, Renner KJ, Swallow JG. David vs. Goliath: Serotonin modulates opponent perception between smaller and larger rivals. Behav Brain Res. 2015 Oct 01; 292:521-7. PMID: 26188180.
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    45. Bubak AN, Redmond DE, Elsworth JD, Roth RH, Collier TJ, Bjugstad KB, Blanchard BC, Sladek JR. A potential compensatory role for endogenous striatal tyrosine hydroxylase-positive neurons in a nonhuman primate model of Parkinson's disease. Cell Transplant. 2015; 24(4):673-80. PMID: 25839107.
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    46. Bubak AN, Renner KJ, Swallow JG. Heightened serotonin influences contest outcome and enhances expression of high-intensity aggressive behaviors. Behav Brain Res. 2014 Feb 01; 259:137-42. PMID: 24211450.
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    47. Bubak AN, Swallow JG, Renner KJ. Whole brain monoamine detection and manipulation in a stalk-eyed fly. J Neurosci Methods. 2013 Sep 30; 219(1):124-30. PMID: 23891953.
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