 Connection
David Ecker to Base Sequence
This is a "connection" page, showing publications David Ecker has written about Base Sequence.
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Connection Strength |
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0.494 |
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Eshoo MW, Whitehouse CA, Zoll ST, Massire C, Pennella TT, Blyn LB, Sampath R, Hall TA, Ecker JA, Desai A, Wasieloski LP, Li F, Turell MJ, Schink A, Rudnick K, Otero G, Weaver SC, Ludwig GV, Hofstadler SA, Ecker DJ. Direct broad-range detection of alphaviruses in mosquito extracts. Virology. 2007 Nov 25; 368(2):286-95.
Score: 0.055
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Sampath R, Hofstadler SA, Blyn LB, Eshoo MW, Hall TA, Massire C, Levene HM, Hannis JC, Harrell PM, Neuman B, Buchmeier MJ, Jiang Y, Ranken R, Drader JJ, Samant V, Griffey RH, McNeil JA, Crooke ST, Ecker DJ. Rapid identification of emerging pathogens: coronavirus. Emerg Infect Dis. 2005 Mar; 11(3):373-9.
Score: 0.047
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Lesnik EA, Fogel GB, Weekes D, Henderson TJ, Levene HB, Sampath R, Ecker DJ. Identification of conserved regulatory RNA structures in prokaryotic metabolic pathway genes. Biosystems. 2005 May; 80(2):145-54.
Score: 0.046
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Freier SM, Konings DA, Wyatt JR, Ecker DJ. 'Mutational SURF': a strategy for improving lead compounds identified from combinatorial libraries. Bioorg Med Chem. 1996 May; 4(5):717-25.
Score: 0.025
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Freier SM, Konings DA, Wyatt JR, Ecker DJ. Deconvolution of combinatorial libraries for drug discovery: a model system. J Med Chem. 1995 Jan 20; 38(2):344-52.
Score: 0.023
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Buckheit RW, Roberson JL, Lackman-Smith C, Wyatt JR, Vickers TA, Ecker DJ. Potent and specific inhibition of HIV envelope-mediated cell fusion and virus binding by G quartet-forming oligonucleotide (ISIS 5320). AIDS Res Hum Retroviruses. 1994 Nov; 10(11):1497-506.
Score: 0.023
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Ecker DJ, Vickers TA, Hanecak R, Driver V, Anderson K. Rational screening of oligonucleotide combinatorial libraries for drug discovery. Nucleic Acids Res. 1993 Apr 25; 21(8):1853-6.
Score: 0.021
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Ecker DJ, Vickers TA, Bruice TW, Freier SM, Jenison RD, Manoharan M, Zounes M. Pseudo--half-knot formation with RNA. Science. 1992 Aug 14; 257(5072):958-61.
Score: 0.020
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Vickers TA, Ecker DJ. Enhancement of ribosomal frameshifting by oligonucleotides targeted to the HIV gag-pol region. Nucleic Acids Res. 1992 Aug 11; 20(15):3945-53.
Score: 0.020
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Crowder CD, Matthews HE, Rounds MA, Li F, Schutzer SE, Sampath R, Sampath R, Hofstadler SA, Ecker DJ, Eshoo MW. Detection of heartworm infection in dogs via PCR amplification and electrospray ionization mass spectrometry of nucleic acid extracts from whole blood samples. Am J Vet Res. 2012 Jun; 73(6):854-9.
Score: 0.019
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Hoke GD, Draper K, Freier SM, Gonzalez C, Driver VB, Zounes MC, Ecker DJ. Effects of phosphorothioate capping on antisense oligonucleotide stability, hybridization and antiviral efficacy versus herpes simplex virus infection. Nucleic Acids Res. 1991 Oct 25; 19(20):5743-8.
Score: 0.018
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Vickers T, Baker BF, Cook PD, Zounes M, Buckheit RW, Germany J, Ecker DJ. Inhibition of HIV-LTR gene expression by oligonucleotides targeted to the TAR element. Nucleic Acids Res. 1991 Jun 25; 19(12):3359-68.
Score: 0.018
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Grant-Klein RJ, Baldwin CD, Turell MJ, Rossi CA, Li F, Lovari R, Crowder CD, Matthews HE, Rounds MA, Eshoo MW, Blyn LB, Ecker DJ, Sampath R, Whitehouse CA. Rapid identification of vector-borne flaviviruses by mass spectrometry. Mol Cell Probes. 2010 Aug; 24(4):219-28.
Score: 0.017
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Eshoo MW, Whitehouse CA, Nalca A, Zoll S, Ecker JA, Hall TA, Pennella TT, Duncan DD, Desai A, Moradi EK, Rudnick K, Libby B, Ranken R, Sampath R, Hofstadler SA, Ecker DJ, Blyn LB. Rapid and high-throughput pan-Orthopoxvirus detection and identification using PCR and mass spectrometry. PLoS One. 2009 Jul 22; 4(7):e6342.
Score: 0.016
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Hujer KM, Hujer AM, Endimiani A, Thomson JM, Adams MD, Goglin K, Rather PN, Pennella TT, Massire C, Eshoo MW, Sampath R, Blyn LB, Ecker DJ, Bonomo RA. Rapid determination of quinolone resistance in Acinetobacter spp. J Clin Microbiol. 2009 May; 47(5):1436-42.
Score: 0.015
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Ecker DJ, Khan MI, Marsh J, Butt TR, Crooke ST. Chemical synthesis and expression of a cassette adapted ubiquitin gene. J Biol Chem. 1987 Mar 15; 262(8):3524-7.
Score: 0.013
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Ecker DJ, Butt TR, Sternberg EJ, Neeper MP, Debouck C, Gorman JA, Crooke ST. Yeast metallothionein function in metal ion detoxification. J Biol Chem. 1986 Dec 25; 261(36):16895-900.
Score: 0.013
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Seth PP, Miyaji A, Jefferson EA, Sannes-Lowery KA, Osgood SA, Propp SS, Ranken R, Massire C, Sampath R, Ecker DJ, Swayze EE, Griffey RH. SAR by MS: discovery of a new class of RNA-binding small molecules for the hepatitis C virus: internal ribosome entry site IIA subdomain. J Med Chem. 2005 Nov 17; 48(23):7099-102.
Score: 0.012
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Hall TA, Budowle B, Jiang Y, Blyn L, Eshoo M, Sannes-Lowery KA, Sampath R, Drader JJ, Hannis JC, Harrell P, Samant V, White N, Ecker DJ, Hofstadler SA. Base composition analysis of human mitochondrial DNA using electrospray ionization mass spectrometry: a novel tool for the identification and differentiation of humans. Anal Biochem. 2005 Sep 01; 344(1):53-69.
Score: 0.012
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Fogel GB, Porto VW, Weekes DG, Fogel DB, Griffey RH, McNeil JA, Lesnik E, Ecker DJ, Sampath R. Discovery of RNA structural elements using evolutionary computation. Nucleic Acids Res. 2002 Dec 01; 30(23):5310-7.
Score: 0.010
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Macke TJ, Ecker DJ, Gutell RR, Gautheret D, Case DA, Sampath R. RNAMotif, an RNA secondary structure definition and search algorithm. Nucleic Acids Res. 2001 Nov 15; 29(22):4724-35.
Score: 0.009
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Griffey RH, Hofstadler SA, Sannes-Lowery KA, Ecker DJ, Crooke ST. Determinants of aminoglycoside-binding specificity for rRNA by using mass spectrometry. Proc Natl Acad Sci U S A. 1999 Aug 31; 96(18):10129-33.
Score: 0.008
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Konings DA, Wyatt JR, Ecker DJ, Freier SM. Deconvolution of combinatorial libraries for Drug discovery: theoretical comparison of pooling strategies. J Med Chem. 1996 Jul 05; 39(14):2710-9.
Score: 0.006
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Graham MJ, Freier SM, Crooke RM, Ecker DJ, Maslova RN, Lesnik EA. Tritium labeling of antisense oligonucleotides by exchange with tritiated water. Nucleic Acids Res. 1993 Aug 11; 21(16):3737-43.
Score: 0.005
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Lima WF, Monia BP, Ecker DJ, Freier SM. Implication of RNA structure on antisense oligonucleotide hybridization kinetics. Biochemistry. 1992 Dec 08; 31(48):12055-61.
Score: 0.005
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Manoharan M, Johnson LK, McGee DP, Guinosso CJ, Ramasamy K, Springer RH, Bennett CF, Ecker DJ, Vickers T, Cowsert L, et al. Chemical modifications to improve uptake and bioavailability of antisense oligonucleotides. Ann N Y Acad Sci. 1992 Oct 28; 660:306-9.
Score: 0.005
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Monia BP, Johnston JF, Ecker DJ, Zounes MA, Lima WF, Freier SM. Selective inhibition of mutant Ha-ras mRNA expression by antisense oligonucleotides. J Biol Chem. 1992 Oct 05; 267(28):19954-62.
Score: 0.005
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Nakada MT, Haskell KM, Ecker DJ, Stadel JM, Crooke ST. Genetic regulation of beta 2-adrenergic receptors in 3T3-L1 fibroblasts. Biochem J. 1989 May 15; 260(1):53-9.
Score: 0.004
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Monia BP, Ecker DJ, Jonnalagadda S, Marsh J, Gotlib L, Butt TR, Crooke ST. Gene synthesis, expression, and processing of human ubiquitin carboxyl extension proteins. J Biol Chem. 1989 Mar 05; 264(7):4093-103.
Score: 0.004
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Connection Strength
The connection strength for concepts is the sum of the scores for each matching publication.
Publication scores are based on many factors, including how long ago they were written and whether the person is a first or senior author.
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