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Sean CL Deoni

TitleAssociate Professor
InstitutionUniversity of Colorado Denver - Anschutz Medical Campus
DepartmentSOM-Radiology

    Collapse Research 
    Collapse research activities and funding
    R01MH087510     (DEONI, SEAN CL)Sep 30, 2009 - Aug 31, 2014
    NIH/NIMH
    Imaging White Matter Maturation During Healthy Brain Development
    Role: Principal Investigator

    R01HD076589     (DEONI, SEAN CL)Sep 27, 2012 - Dec 31, 2017
    NIH/NICHD
    Effects of Placental Transfusion on Early Brain Development
    Role: Principal Investigator

    R21HD083944     (D'SA, VIREN ANDREW)Apr 6, 2016 - Mar 31, 2018
    NIH/NICHD
    Lead Exposure and Early Brain Development
    Role: Co-Principal Investigator

    UG3OD023313     (DEONI, SEAN CL)Sep 21, 2016 - Aug 31, 2018
    NIH
    The Developing Brain: Influences and Outcomes
    Role: Principal Investigator

    Collapse Bibliographic 
    Collapse selected publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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    1. Remer J, Croteau-Chonka E, Dean DC, D'Arpino S, Dirks H, Whiley D, Deoni SCL. Quantifying cortical development in typically developing toddlers and young children, 1-6 years of age. Neuroimage. 2017 Jun; 153:246-261. PMID: 28392489.
      View in: PubMed
    2. Martinez-Murcia FJ, Lai MC, Górriz JM, Ramírez J, Young AM, Deoni SC, Ecker C, Lombardo MV, Baron-Cohen S, Murphy DG, Bullmore ET, Suckling J. On the brain structure heterogeneity of autism: Parsing out acquisition site effects with significance-weighted principal component analysis. Hum Brain Mapp. 2017 Mar; 38(3):1208-1223. PMID: 27774713.
      View in: PubMed
    3. Kurth S, Dean DC, Achermann P, O'Muircheartaigh J, Huber R, Deoni SC, LeBourgeois MK. Increased Sleep Depth in Developing Neural Networks: New Insights from Sleep Restriction in Children. Front Hum Neurosci. 2016; 10:456. PMID: 27708567.
      View in: PubMed
    4. Dean DC, O'Muircheartaigh J, Dirks H, Travers BG, Adluru N, Alexander AL, Deoni SC. Mapping an index of the myelin g-ratio in infants using magnetic resonance imaging. Neuroimage. 2016 May 15; 132:225-37. PMID: 26908314; PMCID: PMC4851913.
    5. Croteau-Chonka EC, Dean DC, Remer J, Dirks H, O'Muircheartaigh J, Deoni SC. Examining the relationships between cortical maturation and white matter myelination throughout early childhood. Neuroimage. 2016 Jan 15; 125:413-21. PMID: 26499814; PMCID: PMC4691410 [Available on 01/15/17].
    6. Chevalier N, Kurth S, Doucette MR, Wiseheart M, Deoni SC, Dean DC, O'Muircheartaigh J, Blackwell KA, Munakata Y, LeBourgeois MK. Myelination Is Associated with Processing Speed in Early Childhood: Preliminary Insights. PLoS One. 2015; 10(10):e0139897. PMID: 26440654; PMCID: PMC4595421.
    7. Kolind S, Seddigh A, Combes A, Russell-Schulz B, Tam R, Yogendrakumar V, Deoni S, Sibtain NA, Traboulsee A, Williams SC, Barker GJ, Brex PA. Brain and cord myelin water imaging: a progressive multiple sclerosis biomarker. Neuroimage Clin. 2015; 9:574-80. PMID: 26594633; PMCID: PMC4625204.
    8. Stence NV, Mirsky DM, Deoni SC, Armstrong-Wells J. Paradoxical centrally increased diffusivity in perinatal arterial ischemic stroke. Pediatr Radiol. 2016 Jan; 46(1):82-6. PMID: 26238967.
      View in: PubMed
    9. Correia S, Ahern DC, Rabinowitz AR, Farrer TJ, Smith Watts AK, Salloway S, Malloy PF, Deoni SC. Lowering the Floor on Trail Making Test Part B: Psychometric Evidence for a New Scoring Metric. Arch Clin Neuropsychol. 2015 Nov; 30(7):643-56. PMID: 26164816.
      View in: PubMed
    10. Deoni SC, Dean DC, Remer J, Dirks H, O'Muircheartaigh J. Cortical maturation and myelination in healthy toddlers and young children. Neuroimage. 2015 Jul 15; 115:147-61. PMID: 25944614; PMCID: PMC4463864.
    11. Dean DC, O'Muircheartaigh J, Dirks H, Waskiewicz N, Lehman K, Walker L, Piryatinsky I, Deoni SC. Estimating the age of healthy infants from quantitative myelin water fraction maps. Hum Brain Mapp. 2015 Apr; 36(4):1233-44. PMID: 25640476; PMCID: PMC4418382.
    12. Gajawelli N, Deoni S, Dirks H, Dean D, O'Muircheartaigh J, Sawardekar S, Ezis A, Wang Y, Nelson MD, Coulon O, Lepore N. Characterization of the central sulcus in the brain in early childhood. Conf Proc IEEE Eng Med Biol Soc. 2015; 2015:149-52. PMID: 26736222.
      View in: PubMed
    13. Deoni SC, O'Muircheartaigh J, Elison JT, Walker L, Doernberg E, Waskiewicz N, Dirks H, Piryatinsky I, Dean DC, Jumbe NL. White matter maturation profiles through early childhood predict general cognitive ability. Brain Struct Funct. 2016 Mar; 221(2):1189-203. PMID: 25432771; PMCID: PMC4771819.
    14. Deoni SC, Zinkstok JR, Daly E, Ecker C, Williams SC, Murphy DG. White-matter relaxation time and myelin water fraction differences in young adults with autism. Psychol Med. 2015 Mar; 45(4):795-805. PMID: 25111948.
      View in: PubMed
    15. Deoni SC, Dean DC, Walker L, Dirks H, O'Muircheartaigh J. Nutritional influences on early white matter development: response to Anderson and Burggren. Neuroimage. 2014 Oct 15; 100:703-5. PMID: 25064669.
      View in: PubMed
    16. Pouwels PJ, Vanderver A, Bernard G, Wolf NI, Dreha-Kulczewksi SF, Deoni SC, Bertini E, Kohlschütter A, Richardson W, Ffrench-Constant C, Köhler W, Rowitch D, Barkovich AJ. Hypomyelinating leukodystrophies: translational research progress and prospects. Ann Neurol. 2014 Jul; 76(1):5-19. PMID: 24916848.
      View in: PubMed
    17. Ecker C, Shahidiani A, Feng Y, Daly E, Murphy C, D'Almeida V, Deoni S, Williams SC, Gillan N, Gudbrandsen M, Wichers R, Andrews D, Van Hemert L, Murphy DG. The effect of age, diagnosis, and their interaction on vertex-based measures of cortical thickness and surface area in autism spectrum disorder. J Neural Transm (Vienna). 2014 Sep; 121(9):1157-70. PMID: 24752753.
      View in: PubMed
    18. Dean DC, O'Muircheartaigh J, Dirks H, Waskiewicz N, Walker L, Doernberg E, Piryatinsky I, Deoni SC. Characterizing longitudinal white matter development during early childhood. Brain Struct Funct. 2015 Jul; 220(4):1921-33. PMID: 24710623; PMCID: PMC4481335.
    19. O'Muircheartaigh J, Dean DC, Ginestet CE, Walker L, Waskiewicz N, Lehman K, Dirks H, Piryatinsky I, Deoni SC. White matter development and early cognition in babies and toddlers. Hum Brain Mapp. 2014 Sep; 35(9):4475-87. PMID: 24578096; PMCID: PMC4336562.
    20. Suckling J, Henty J, Ecker C, Deoni SC, Lombardo MV, Baron-Cohen S, Jezzard P, Barnes A, Chakrabarti B, Ooi C, Lai MC, Williams SC, Murphy DG, Bullmore E. Are power calculations useful? A multicentre neuroimaging study. Hum Brain Mapp. 2014 Aug; 35(8):3569-77. PMID: 24644267; PMCID: PMC4282319.
    21. Deoni SC, Kolind SH. Investigating the stability of mcDESPOT myelin water fraction values derived using a stochastic region contraction approach. Magn Reson Med. 2015 Jan; 73(1):161-9. PMID: 24464472.
      View in: PubMed
    22. Dean DC, Jerskey BA, Chen K, Protas H, Thiyyagura P, Roontiva A, O'Muircheartaigh J, Dirks H, Waskiewicz N, Lehman K, Siniard AL, Turk MN, Hua X, Madsen SK, Thompson PM, Fleisher AS, Huentelman MJ, Deoni SC, Reiman EM. Brain differences in infants at differential genetic risk for late-onset Alzheimer disease: a cross-sectional imaging study. JAMA Neurol. 2014 Jan; 71(1):11-22. PMID: 24276092; PMCID: PMC4056558.
    23. O'Muircheartaigh J, Dean DC, Dirks H, Waskiewicz N, Lehman K, Jerskey BA, Deoni SC. Interactions between white matter asymmetry and language during neurodevelopment. J Neurosci. 2013 Oct 09; 33(41):16170-7. PMID: 24107949; PMCID: PMC3792458.
    24. Dean DC, O'Muircheartaigh J, Dirks H, Waskiewicz N, Lehman K, Walker L, Han M, Deoni SC. Modeling healthy male white matter and myelin development: 3 through 60months of age. Neuroimage. 2014 Jan 01; 84:742-52. PMID: 24095814; PMCID: PMC3895775.
    25. Lamar M, Zhou XJ, Charlton RA, Dean D, Little D, Deoni SC. In vivo quantification of white matter microstructure for use in aging: a focus on two emerging techniques. Am J Geriatr Psychiatry. 2014 Feb; 22(2):111-21. PMID: 24080382; PMCID: PMC3947219.
    26. Lai MC, Lombardo MV, Suckling J, Ruigrok AN, Chakrabarti B, Ecker C, Deoni SC, Craig MC, Murphy DG, Bullmore ET, Baron-Cohen S. Biological sex affects the neurobiology of autism. Brain. 2013 Sep; 136(Pt 9):2799-815. PMID: 23935125; PMCID: PMC3754459.
    27. Dean DC, Dirks H, O'Muircheartaigh J, Walker L, Jerskey BA, Lehman K, Han M, Waskiewicz N, Deoni SC. Pediatric neuroimaging using magnetic resonance imaging during non-sedated sleep. Pediatr Radiol. 2014 Jan; 44(1):64-72. PMID: 23917588; PMCID: PMC3889986.
    28. Deoni SC, Dean DC, Piryatinsky I, O'Muircheartaigh J, Waskiewicz N, Lehman K, Han M, Dirks H. Breastfeeding and early white matter development: A cross-sectional study. Neuroimage. 2013 Nov 15; 82:77-86. PMID: 23721722; PMCID: PMC3777218.
    29. Spader HS, Ellermeier A, O'Muircheartaigh J, Dean DC, Dirks H, Boxerman JL, Cosgrove GR, Deoni SC. Advances in myelin imaging with potential clinical application to pediatric imaging. Neurosurg Focus. 2013 Apr; 34(4):E9. PMID: 23544415; PMCID: PMC3777219.
    30. Deoni SC, Matthews L, Kolind SH. One component? Two components? Three? The effect of including a nonexchanging "free" water component in multicomponent driven equilibrium single pulse observation of T1 and T2. Magn Reson Med. 2013 Jul; 70(1):147-54. PMID: 22915316; PMCID: PMC3711852.
    31. Deoni SC, Dean DC, O'Muircheartaigh J, Dirks H, Jerskey BA. Investigating white matter development in infancy and early childhood using myelin water faction and relaxation time mapping. Neuroimage. 2012 Nov 15; 63(3):1038-53. PMID: 22884937; PMCID: PMC3711836.
    32. Ecker C, Suckling J, Deoni SC, Lombardo MV, Bullmore ET, Baron-Cohen S, Catani M, Jezzard P, Barnes A, Bailey AJ, Williams SC, Murphy DG. Brain anatomy and its relationship to behavior in adults with autism spectrum disorder: a multicenter magnetic resonance imaging study. Arch Gen Psychiatry. 2012 Feb; 69(2):195-209. PMID: 22310506.
      View in: PubMed
    33. Kolind S, Matthews L, Johansen-Berg H, Leite MI, Williams SC, Deoni S, Palace J. Myelin water imaging reflects clinical variability in multiple sclerosis. Neuroimage. 2012 Mar; 60(1):263-70. PMID: 22155325; PMCID: PMC3671155.
    34. Kitzler HH, Su J, Zeineh M, Harper-Little C, Leung A, Kremenchutzky M, Deoni SC, Rutt BK. Deficient MWF mapping in multiple sclerosis using 3D whole-brain multi-component relaxation MRI. Neuroimage. 2012 Feb 01; 59(3):2670-7. PMID: 21920444; PMCID: PMC3673309.
    35. Blasi A, Mercure E, Lloyd-Fox S, Thomson A, Brammer M, Sauter D, Deeley Q, Barker GJ, Renvall V, Deoni S, Gasston D, Williams SC, Johnson MH, Simmons A, Murphy DG. Early specialization for voice and emotion processing in the infant brain. Curr Biol. 2011 Jul 26; 21(14):1220-4. PMID: 21723130.
      View in: PubMed
    36. Deoni SC, Mercure E, Blasi A, Gasston D, Thomson A, Johnson M, Williams SC, Murphy DG. Mapping infant brain myelination with magnetic resonance imaging. J Neurosci. 2011 Jan 12; 31(2):784-91. PMID: 21228187.
      View in: PubMed
    37. Deoni SC. Magnetic resonance relaxation and quantitative measurement in the brain. Methods Mol Biol. 2011; 711:65-108. PMID: 21279598.
      View in: PubMed
    38. Deoni SC. Correction of main and transmit magnetic field (B0 and B1) inhomogeneity effects in multicomponent-driven equilibrium single-pulse observation of T1 and T2. Magn Reson Med. 2011 Apr; 65(4):1021-35. PMID: 21413066; PMCID: PMC3777237.
    39. Kolind SH, Deoni SC. Rapid three-dimensional multicomponent relaxation imaging of the cervical spinal cord. Magn Reson Med. 2011 Feb; 65(2):551-6. PMID: 20882672.
      View in: PubMed
    40. Deoni SC. Quantitative relaxometry of the brain. Top Magn Reson Imaging. 2010 Apr; 21(2):101-13. PMID: 21613875; PMCID: PMC3613135.
    41. Deoni SC. Transverse relaxation time (T2) mapping in the brain with off-resonance correction using phase-cycled steady-state free precession imaging. J Magn Reson Imaging. 2009 Aug; 30(2):411-7. PMID: 19629970.
      View in: PubMed
    42. Menke RA, Scholz J, Miller KL, Deoni S, Jbabdi S, Matthews PM, Zarei M. MRI characteristics of the substantia nigra in Parkinson's disease: a combined quantitative T1 and DTI study. Neuroimage. 2009 Aug 15; 47(2):435-41. PMID: 19447183.
      View in: PubMed
    43. McNab JA, Jbabdi S, Deoni SC, Douaud G, Behrens TE, Miller KL. High resolution diffusion-weighted imaging in fixed human brain using diffusion-weighted steady state free precession. Neuroimage. 2009 Jul 01; 46(3):775-85. PMID: 19344686.
      View in: PubMed
    44. Deoni SC, Rutt BK, Arun T, Pierpaoli C, Jones DK. Gleaning multicomponent T1 and T2 information from steady-state imaging data. Magn Reson Med. 2008 Dec; 60(6):1372-87. PMID: 19025904.
      View in: PubMed
    45. Deoni SC, Rutt BK, Jones DK. Investigating exchange and multicomponent relaxation in fully-balanced steady-state free precession imaging. J Magn Reson Imaging. 2008 Jun; 27(6):1421-9. PMID: 18504765.
      View in: PubMed
    46. Deoni SC, Williams SC, Jezzard P, Suckling J, Murphy DG, Jones DK. Standardized structural magnetic resonance imaging in multicentre studies using quantitative T1 and T2 imaging at 1.5 T. Neuroimage. 2008 Apr 01; 40(2):662-71. PMID: 18221894.
      View in: PubMed
    47. Deoni SC. High-resolution T1 mapping of the brain at 3T with driven equilibrium single pulse observation of T1 with high-speed incorporation of RF field inhomogeneities (DESPOT1-HIFI). J Magn Reson Imaging. 2007 Oct; 26(4):1106-11. PMID: 17896356.
      View in: PubMed
    48. Deoni SC, Catani M. Visualization of the deep cerebellar nuclei using quantitative T1 and rho magnetic resonance imaging at 3 Tesla. Neuroimage. 2007 Oct 01; 37(4):1260-6. PMID: 17702607.
      View in: PubMed
    49. Deoni SC, Rutt BK, Jones DK. Investigating the effect of exchange and multicomponent T(1) relaxation on the short repetition time spoiled steady-state signal and the DESPOT1 T(1) quantification method. J Magn Reson Imaging. 2007 Mar; 25(3):570-8. PMID: 17326090.
      View in: PubMed
    50. Deoni SC, Rutt BK, Parrent AG, Peters TM. Segmentation of thalamic nuclei using a modified k-means clustering algorithm and high-resolution quantitative magnetic resonance imaging at 1.5 T. Neuroimage. 2007 Jan 01; 34(1):117-26. PMID: 17070073.
      View in: PubMed
    51. Deoni SC, Rutt BK, Peters TM. Synthetic T1-weighted brain image generation with incorporated coil intensity correction using DESPOT1. Magn Reson Imaging. 2006 Nov; 24(9):1241-8. PMID: 17071345.
      View in: PubMed
    52. Guo T, Finnis KW, Deoni SC, Parrent AG, Peters TM. Comparison of different targeting methods for subthalamic nucleus deep brain stimulation. Med Image Comput Comput Assist Interv. 2006; 9(Pt 1):768-75. PMID: 17354960.
      View in: PubMed
    53. Deoni SC, Josseau MJ, Rutt BK, Peters TM. Visualization of thalamic nuclei on high resolution, multi-averaged T1 and T2 maps acquired at 1.5 T. Hum Brain Mapp. 2005 Jul; 25(3):353-9. PMID: 15852386.
      View in: PubMed
    54. Deoni SC, Peters TM, Rutt BK. High-resolution T1 and T2 mapping of the brain in a clinically acceptable time with DESPOT1 and DESPOT2. Magn Reson Med. 2005 Jan; 53(1):237-41. PMID: 15690526.
      View in: PubMed
    55. Deoni SC, Ward HA, Peters TM, Rutt BK. Rapid T2 estimation with phase-cycled variable nutation steady-state free precession. Magn Reson Med. 2004 Aug; 52(2):435-9. PMID: 15282830.
      View in: PubMed
    56. Deoni SC, Peters TM, Rutt BK. Quantitative diffusion imaging with steady-state free precession. Magn Reson Med. 2004 Feb; 51(2):428-33. PMID: 14755673.
      View in: PubMed
    57. Deoni SC, Peters TM, Rutt BK. Determination of optimal angles for variable nutation proton magnetic spin-lattice, T1, and spin-spin, T2, relaxation times measurement. Magn Reson Med. 2004 Jan; 51(1):194-9. PMID: 14705061.
      View in: PubMed
    58. Deoni SC, Rutt BK, Peters TM. Rapid combined T1 and T2 mapping using gradient recalled acquisition in the steady state. Magn Reson Med. 2003 Mar; 49(3):515-26. PMID: 12594755.
      View in: PubMed
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