 Connection
Debashis Ghosh to Computer Simulation
This is a "connection" page, showing publications Debashis Ghosh has written about Computer Simulation.
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Connection Strength |
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2.769 |
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Poisson LM, Sreekumar A, Chinnaiyan AM, Ghosh D. Pathway-directed weighted testing procedures for the integrative analysis of gene expression and metabolomic data. Genomics. 2012 May; 99(5):265-74.
Score: 0.284
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Jensen AM, DeWitt P, Bettcher BM, Wrobel J, Kechris K, Ghosh D. Kernel machine tests of association using extrinsic and intrinsic cluster evaluation metrics. PLoS Comput Biol. 2024 Nov; 20(11):e1012524.
Score: 0.170
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Suresh K, G?rg C, Ghosh D. Model-agnostic explanations for survival prediction models. Stat Med. 2024 May 20; 43(11):2161-2182.
Score: 0.163
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Seal S, Neelon B, Angel PM, O'Quinn EC, Hill E, Vu T, Ghosh D, Mehta AS, Wallace K, Alekseyenko AV. SpaceANOVA: Spatial Co-occurrence Analysis of Cell Types in Multiplex Imaging Data Using Point Process and Functional ANOVA. J Proteome Res. 2024 04 05; 23(4):1131-1143.
Score: 0.162
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Carpenter CM, Gillenwater L, Bowler R, Kechris K, Ghosh D. TreeKernel: interpretable kernel machine tests for interactions between -omics and clinical predictors with applications to metabolomics and COPD phenotypes. BMC Bioinformatics. 2023 Oct 25; 24(1):398.
Score: 0.158
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Seal S, Bitler BG, Ghosh D. SMASH: Scalable Method for Analyzing Spatial Heterogeneity of genes in spatial transcriptomics data. PLoS Genet. 2023 Oct; 19(10):e1010983.
Score: 0.158
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Seal S, Ghosh D. MIAMI: mutual information-based analysis of multiplex imaging data. Bioinformatics. 2022 08 02; 38(15):3818-3826.
Score: 0.145
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Jensen AM, Tregellas JR, Sutton B, Xing F, Ghosh D. Kernel machine tests of association between brain networks and phenotypes. PLoS One. 2019; 14(3):e0199340.
Score: 0.115
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Rudra P, Broadaway KA, Ware EB, Jhun MA, Bielak LF, Zhao W, Smith JA, Peyser PA, Kardia SLR, Epstein MP, Ghosh D. Testing cross-phenotype effects of rare variants in longitudinal studies of complex traits. Genet Epidemiol. 2018 06; 42(4):320-332.
Score: 0.107
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Cho Y, Hu C, Ghosh D. Covariate adjustment using propensity scores for dependent censoring problems in the accelerated failure time model. Stat Med. 2018 02 10; 37(3):390-404.
Score: 0.104
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Hua WY, Ghosh D. Equivalence of kernel machine regression and kernel distance covariance for multidimensional phenotype association studies. Biometrics. 2015 Sep; 71(3):812-20.
Score: 0.088
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Cho Y, Ghosh D. Weighted estimation of the accelerated failure time model in the presence of dependent censoring. PLoS One. 2015; 10(4):e0124381.
Score: 0.088
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Zhan X, Patterson AD, Ghosh D. Kernel approaches for differential expression analysis of mass spectrometry-based metabolomics data. BMC Bioinformatics. 2015 Mar 11; 16:77.
Score: 0.087
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Ghosh D, Zhu Y, Coffman DL. Penalized regression procedures for variable selection in the potential outcomes framework. Stat Med. 2015 May 10; 34(10):1645-58.
Score: 0.086
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Ghosh D. Genomic outlier detection in high-throughput data analysis. Methods Mol Biol. 2013; 972:141-53.
Score: 0.075
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Poisson LM, Taylor JM, Ghosh D. Integrative set enrichment testing for multiple omics platforms. BMC Bioinformatics. 2011 Nov 25; 12:459.
Score: 0.069
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Ghosh D, Taylor JM, Sargent DJ. Meta-analysis for surrogacy: accelerated failure time models and semicompeting risks modeling. Biometrics. 2012 Mar; 68(1):226-32.
Score: 0.067
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Ghosh D. Discrete nonparametric algorithms for outlier detection with genomic data. J Biopharm Stat. 2010 Mar; 20(2):193-208.
Score: 0.061
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Ghosh D. Semiparametric analysis of recurrent events: artificial censoring, truncation, pairwise estimation and inference. Lifetime Data Anal. 2010 Oct; 16(4):509-24.
Score: 0.061
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Ghosh D. On assessing surrogacy in a single trial setting using a semicompeting risks paradigm. Biometrics. 2009 Jun; 65(2):521-9.
Score: 0.058
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Yuan Z, Ghosh D. Combining multiple biomarker models in logistic regression. Biometrics. 2008 Jun; 64(2):431-9.
Score: 0.053
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Liu D, Lin X, Ghosh D. Semiparametric regression of multidimensional genetic pathway data: least-squares kernel machines and linear mixed models. Biometrics. 2007 Dec; 63(4):1079-88.
Score: 0.052
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Ghosh D. Semiparametric inference for surrogate endpoints with bivariate censored data. Biometrics. 2008 Mar; 64(1):149-56.
Score: 0.051
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Ghosh D. Proportional hazards regression for cancer studies. Biometrics. 2008 Mar; 64(1):141-8.
Score: 0.051
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Ghosh D. Semi-parametric inferences for association with semi-competing risks data. Stat Med. 2006 Jun 30; 25(12):2059-70.
Score: 0.048
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Ghosh D, Lin DY. Semiparametric analysis of recurrent events data in the presence of dependent censoring. Biometrics. 2003 Dec; 59(4):877-85.
Score: 0.040
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Solis-Lemus CR, Fischer ST, Todor A, Liu C, Leslie EJ, Cutler DJ, Ghosh D, Epstein MP. Leveraging Family History in Case-Control Analyses of Rare Variation. Genetics. 2020 02; 214(2):295-303.
Score: 0.030
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Holleman AM, Broadaway KA, Duncan R, Todor A, Almli LM, Bradley B, Ressler KJ, Ghosh D, Mulle JG, Epstein MP. Powerful and Efficient Strategies for Genetic Association Testing of Symptom and Questionnaire Data in Psychiatric Genetic Studies. Sci Rep. 2019 05 17; 9(1):7523.
Score: 0.029
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Ge T, Nichols TE, Ghosh D, Mormino EC, Smoller JW, Sabuncu MR. A kernel machine method for detecting effects of interaction between multidimensional variable sets: an imaging genetics application. Neuroimage. 2015 Apr 01; 109:505-514.
Score: 0.022
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Chen W, Ghosh D, Raghunathan TE, Norkin M, Sargent DJ, Bepler G. On Bayesian methods of exploring qualitative interactions for targeted treatment. Stat Med. 2012 Dec 10; 31(28):3693-707.
Score: 0.018
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Kwee LC, Liu D, Lin X, Ghosh D, Epstein MP. A powerful and flexible multilocus association test for quantitative traits. Am J Hum Genet. 2008 Feb; 82(2):386-97.
Score: 0.013
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Shen R, Ghosh D, Chinnaiyan A, Meng Z. Eigengene-based linear discriminant model for tumor classification using gene expression microarray data. Bioinformatics. 2006 Nov 01; 22(21):2635-42.
Score: 0.012
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Rhodes DR, Tomlins SA, Varambally S, Mahavisno V, Barrette T, Kalyana-Sundaram S, Ghosh D, Pandey A, Chinnaiyan AM. Probabilistic model of the human protein-protein interaction network. Nat Biotechnol. 2005 Aug; 23(8):951-9.
Score: 0.011
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Abecasis GR, Ghosh D, Nichols TE. Linkage disequilibrium: ancient history drives the new genetics. Hum Hered. 2005; 59(2):118-24.
Score: 0.011
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Levin AM, Ghosh D, Cho KR, Kardia SL. A model-based scan statistic for identifying extreme chromosomal regions of gene expression in human tumors. Bioinformatics. 2005 Jun 15; 21(12):2867-74.
Score: 0.011
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Shedden K, Chen W, Kuick R, Ghosh D, Macdonald J, Cho KR, Giordano TJ, Gruber SB, Fearon ER, Taylor JM, Hanash S. Comparison of seven methods for producing Affymetrix expression scores based on False Discovery Rates in disease profiling data. BMC Bioinformatics. 2005 Feb 10; 6:26.
Score: 0.011
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Connection Strength
The connection strength for concepts is the sum of the scores for each matching publication.
Publication scores are based on many factors, including how long ago they were written and whether the person is a first or senior author.
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