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Se Jin Song

TitleResearch Associate
InstitutionUniversity of Colorado Boulder
DepartmentEcology & Evolutionary Biology
ORCID ORCID Icon0000-0003-0750-5709 Additional info

    Collapse Bibliographic 
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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    1. Hyde ER, Navas-Molina JA, Song SJ, Kueneman JG, Ackermann G, Cardona C, Humphrey G, Boyer D, Weaver T, Mendelson JR, McKenzie VJ, Gilbert JA, Knight R. The Oral and Skin Microbiomes of Captive Komodo Dragons Are Significantly Shared with Their Habitat. mSystems. 2016 Jul-Aug; 1(4). PMID: 27822543.
      View in: PubMed
    2. Levin II, Zonana DM, Fosdick BK, Song SJ, Knight R, Safran RJ. Stress response, gut microbial diversity and sexual signals correlate with social interactions. Biol Lett. 2016 Jun; 12(6). PMID: 27354713; PMCID: PMC4938059 [Available on 06/01/17].
    3. Song SJ, Amir A, Metcalf JL, Amato KR, Xu ZZ, Humphrey G, Knight R. Preservation Methods Differ in Fecal Microbiome Stability, Affecting Suitability for Field Studies. mSystems. 2016 May-Jun; 1(3). PMID: 27822526.
      View in: PubMed
    4. Metcalf JL, Xu ZZ, Weiss S, Lax S, Van Treuren W, Hyde ER, Song SJ, Amir A, Larsen P, Sangwan N, Haarmann D, Humphrey GC, Ackermann G, Thompson LR, Lauber C, Bibat A, Nicholas C, Gebert MJ, Petrosino JF, Reed SC, Gilbert JA, Lynne AM, Bucheli SR, Carter DO, Knight R. Microbial community assembly and metabolic function during mammalian corpse decomposition. Science. 2016 Jan 08; 351(6269):158-62. PMID: 26657285.
      View in: PubMed
    5. Delsuc F, Metcalf JL, Wegener Parfrey L, Song SJ, González A, Knight R. Convergence of gut microbiomes in myrmecophagous mammals. Mol Ecol. 2014 Mar; 23(6):1301-17. PMID: 24118574.
      View in: PubMed
    6. Song SJ, Lauber C, Costello EK, Lozupone CA, Humphrey G, Berg-Lyons D, Caporaso JG, Knights D, Clemente JC, Nakielny S, Gordon JI, Fierer N, Knight R. Cohabiting family members share microbiota with one another and with their dogs. Elife. 2013 Apr 16; 2:e00458. PMID: 23599893; PMCID: PMC3628085.
    7. Song SJ, Dominguez-Bello MG, Knight R. How delivery mode and feeding can shape the bacterial community in the infant gut. CMAJ. 2013 Mar 19; 185(5):373-4. PMID: 23401408; PMCID: PMC3602250.
    8. Navas-Molina JA, Peralta-Sánchez JM, González A, McMurdie PJ, Vázquez-Baeza Y, Xu Z, Ursell LK, Lauber C, Zhou H, Song SJ, Huntley J, Ackermann GL, Berg-Lyons D, Holmes S, Caporaso JG, Knight R. Advancing our understanding of the human microbiome using QIIME. Methods Enzymol. 2013; 531:371-444. PMID: 24060131; PMCID: PMC4517945.
    9. Paull SH, Song S, McClure KM, Sackett LC, Kilpatrick AM, Johnson PT. From superspreaders to disease hotspots: linking transmission across hosts and space. Front Ecol Environ. 2012 Mar 01; 10(2):75-82. PMID: 23482675.
      View in: PubMed
    10. Gonzalez A, King A, Robeson MS, Song S, Shade A, Metcalf JL, Knight R. Characterizing microbial communities through space and time. Curr Opin Biotechnol. 2012 Jun; 23(3):431-6. PMID: 22154467; PMCID: PMC3311466.
    11. Gonzalez A, Clemente JC, Shade A, Metcalf JL, Song S, Prithiviraj B, Palmer BE, Knight R. Our microbial selves: what ecology can teach us. EMBO Rep. 2011 Jul 01; 12(8):775-84. PMID: 21720391; PMCID: PMC3147266.
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