Drew Schield
Title | Post-Doctoral Fellow |
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Institution | University of Colorado Boulder |
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Department | Ecology & Evolutionary Biology |
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Bibliographic
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Schield DR, Perry BW, Card DC, Pasquesi GIM, Westfall AK, Mackessy SP, Castoe TA. The Rattlesnake W Chromosome: A GC-Rich Retroelement Refugium with Retained Gene Function Across Ancient Evolutionary Strata. Genome Biol Evol. 2022 09 06; 14(9). PMID: 35867356.
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Schield DR, Perry BW, Adams RH, Holding ML, Nikolakis ZL, Gopalan SS, Smith CF, Parker JM, Meik JM, DeGiorgio M, Mackessy SP, Castoe TA. The roles of balancing selection and recombination in the evolution of rattlesnake venom. Nat Ecol Evol. 2022 09; 6(9):1367-1380. PMID: 35851850.
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Gopalan SS, Perry BW, Schield DR, Smith CF, Mackessy SP, Castoe TA. Origins, genomic structure and copy number variation of snake venom myotoxins. Toxicon. 2022 Sep; 216:92-106. PMID: 35820472.
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Perry BW, Gopalan SS, Pasquesi GIM, Schield DR, Westfall AK, Smith CF, Koludarov I, Chippindale PT, Pellegrino MW, Chuong EB, Mackessy SP, Castoe TA. Snake venom gene expression is coordinated by novel regulatory architecture and the integration of multiple co-opted vertebrate pathways. Genome Res. 2022 06; 32(6):1058-1073. PMID: 35649579.
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Turbek SP, Schield DR, Scordato ESC, Contina A, Da XW, Liu Y, Liu Y, Pagani-Núñez E, Ren QM, Smith CCR, Stricker CA, Wunder M, Zonana DM, Safran RJ. A migratory divide spanning two continents is associated with genomic and ecological divergence. Evolution. 2022 04; 76(4):722-736. PMID: 35166383.
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Koochekian N, Ascanio A, Farleigh K, Card DC, Schield DR, Castoe TA, Jezkova T. A chromosome-level genome assembly and annotation of the desert horned lizard, Phrynosoma platyrhinos, provides insight into chromosomal rearrangements among reptiles. Gigascience. 2022 02 04; 11. PMID: 35134927.
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Westfall AK, Perry BW, Kamal AHM, Hales NR, Kay JC, Sapkota M, Schield DR, Pellegrino MW, Secor SM, Chowdhury SM, Castoe TA. Identification of an integrated stress and growth response signaling switch that directs vertebrate intestinal regeneration. BMC Genomics. 2022 Jan 04; 23(1):6. PMID: 34983392.
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Ayala MJ, Carter JK, Fachon AS, Flaxman SM, Gil MA, Kenny HV, Laubach ZM, Madden SA, McDermott MT, Medina-García A, Safran RJ, Scherner E, Schield DR, Vasquez-Rey S, Volckens J. Belonging in STEM: an interactive, iterative approach to create and maintain a diverse learning community. Trends Ecol Evol. 2021 11; 36(11):964-967. PMID: 34561090.
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Farleigh K, Vladimirova SA, Blair C, Bracken JT, Koochekian N, Schield DR, Card DC, Finger N, Henault J, Leaché AD, Castoe TA, Jezkova T. The effects of climate and demographic history in shaping genomic variation across populations of the Desert Horned Lizard (Phrynosoma platyrhinos). Mol Ecol. 2021 09; 30(18):4481-4496. PMID: 34245067.
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Schield DR, Scordato ESC, Smith CCR, Carter JK, Cherkaoui SI, Gombobaatar S, Hajib S, Hanane S, Hund AK, Koyama K, Liang W, Liu Y, Magri N, Rubtsov A, Sheta B, Turbek SP, Wilkins MR, Yu L, Safran RJ. Sex-linked genetic diversity and differentiation in a globally distributed avian species complex. Mol Ecol. 2021 05; 30(10):2313-2332. PMID: 33720472.
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Schield DR, Perry BW, Nikolakis ZL, Mackessy SP, Castoe TA. Population Genomic Analyses Confirm Male-Biased Mutation Rates in Snakes. J Hered. 2021 03 29; 112(2):221-227. PMID: 33502475.
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Shortt JA, Timm LE, Hales NR, Nikolakis ZL, Schield DR, Perry BW, Liu Y, Zhong B, Castoe TA, Carlton EJ, Pollock DD. Population genomic analyses of schistosome parasites highlight critical challenges facing endgame elimination efforts. Sci Rep. 2021 03 25; 11(1):6884. PMID: 33767307.
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Perry BW, Schield DR, Adams RH, Castoe TA. Microchromosomes Exhibit Distinct Features of Vertebrate Chromosome Structure and Function with Underappreciated Ramifications for Genome Evolution. Mol Biol Evol. 2021 03 09; 38(3):904-910. PMID: 32986808.
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Nikolakis ZL, Hales NR, Perry BW, Schield DR, Timm LE, Liu Y, Zhong B, Kechris KJ, Carlton EJ, Pollock DD, Castoe TA. Patterns of relatedness and genetic diversity inferred from whole genome sequencing of archival blood fluke miracidia (Schistosoma japonicum). PLoS Negl Trop Dis. 2021 01; 15(1):e0009020. PMID: 33406094.
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Perry BW, Schield DR, Westfall AK, Mackessy SP, Castoe TA. Physiological demands and signaling associated with snake venom production and storage illustrated by transcriptional analyses of venom glands. Sci Rep. 2020 10 22; 10(1):18083. PMID: 33093509.
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Pasquesi GIM, Perry BW, Vandewege MW, Ruggiero RP, Schield DR, Castoe TA. Vertebrate Lineages Exhibit Diverse Patterns of Transposable Element Regulation and Expression across Tissues. Genome Biol Evol. 2020 05 01; 12(5):506-521. PMID: 32271917.
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Schield DR, Pasquesi GIM, Perry BW, Adams RH, Nikolakis ZL, Westfall AK, Orton RW, Meik JM, Mackessy SP, Castoe TA. Snake Recombination Landscapes Are Concentrated in Functional Regions despite PRDM9. Mol Biol Evol. 2020 05 01; 37(5):1272-1294. PMID: 31926008.
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Card DC, Adams RH, Schield DR, Perry BW, Corbin AB, Pasquesi GIM, Row K, Van Kleeck MJ, Daza JM, Booth W, Montgomery CE, Boback SM, Castoe TA. Genomic Basis of Convergent Island Phenotypes in Boa Constrictors. Genome Biol Evol. 2019 11 01; 11(11):3123-3143. PMID: 31642474.
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Watson JA, Spencer CL, Schield DR, Butler BO, Smith LL, Flores-Villela O, Campbell JA, Mackessy SP, Castoe TA, Meik JM. Geographic variation in morphology in the Mohave Rattlesnake (Crotalus scutulatus Kennicott 1861) (Serpentes: Viperidae): implications for species boundaries. Zootaxa. 2019 Oct 07; 4683(1):zootaxa.4683.1.7. PMID: 31715939.
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Perry BW, Andrew AL, Mostafa Kamal AH, Card DC, Schield DR, Pasquesi GIM, Pellegrino MW, Mackessy SP, Chowdhury SM, Secor SM, Castoe TA. Multi-species comparisons of snakes identify coordinated signalling networks underlying post-feeding intestinal regeneration. Proc Biol Sci. 2019 07 10; 286(1906):20190910. PMID: 31288694.
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Schield DR, Card DC, Hales NR, Perry BW, Pasquesi GM, Blackmon H, Adams RH, Corbin AB, Smith CF, Ramesh B, Demuth JP, Betrán E, Tollis M, Meik JM, Mackessy SP, Castoe TA. The origins and evolution of chromosomes, dosage compensation, and mechanisms underlying venom regulation in snakes. Genome Res. 2019 04; 29(4):590-601. PMID: 30898880.
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Strickland JL, Smith CF, Mason AJ, Schield DR, Borja M, Castañeda-Gaytán G, Spencer CL, Smith LL, Trápaga A, Bouzid NM, Campillo-García G, Flores-Villela OA, Antonio-Rangel D, Mackessy SP, Castoe TA, Rokyta DR, Parkinson CL. Evidence for divergent patterns of local selection driving venom variation in Mojave Rattlesnakes (Crotalus scutulatus). Sci Rep. 2018 12 04; 8(1):17622. PMID: 30514908.
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Adams RH, Schield DR, Card DC, Castoe TA. Assessing the Impacts of Positive Selection on Coalescent-Based Species Tree Estimation and Species Delimitation. Syst Biol. 2018 11 01; 67(6):1076-1090. PMID: 29757422.
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Card DC, Perry BW, Adams RH, Schield DR, Young AS, Andrew AL, Jezkova T, Pasquesi GIM, Hales NR, Walsh MR, Rochford MR, Mazzotti FJ, Hart KM, Hunter ME, Castoe TA. Novel ecological and climatic conditions drive rapid adaptation in invasive Florida Burmese pythons. Mol Ecol. 2018 12; 27(23):4744-4757. PMID: 30269397.
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Perry BW, Schield DR, Castoe TA. Evolution: Plasticity versus Selection, or Plasticity and Selection? Curr Biol. 2018 09 24; 28(18):R1104-R1106. PMID: 30253151.
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Perry BW, Card DC, McGlothlin JW, Pasquesi GIM, Adams RH, Schield DR, Hales NR, Corbin AB, Demuth JP, Hoffmann FG, Vandewege MW, Schott RK, Bhattacharyya N, Chang BSW, Casewell NR, Whiteley G, Reyes-Velasco J, Mackessy SP, Gamble T, Storey KB, Biggar KK, Passow CN, Kuo CH, McGaugh SE, Bronikowski AM, de Koning APJ, Edwards SV, Pfrender ME, Minx P, Brodie ED, Brodie ED, Warren WC, Castoe TA. Molecular Adaptations for Sensing and Securing Prey and Insight into Amniote Genome Diversity from the Garter Snake Genome. Genome Biol Evol. 2018 08 01; 10(8):2110-2129. PMID: 30060036.
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Pasquesi GIM, Adams RH, Card DC, Schield DR, Corbin AB, Perry BW, Reyes-Velasco J, Ruggiero RP, Vandewege MW, Shortt JA, Castoe TA. Squamate reptiles challenge paradigms of genomic repeat element evolution set by birds and mammals. Nat Commun. 2018 07 17; 9(1):2774. PMID: 30018307.
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Schield DR, Adams RH, Card DC, Corbin AB, Jezkova T, Hales NR, Meik JM, Perry BW, Spencer CL, Smith LL, García GC, Bouzid NM, Strickland JL, Parkinson CL, Borja M, Castañeda-Gaytán G, Bryson RW, Flores-Villela OA, Mackessy SP, Castoe TA. Cryptic genetic diversity, population structure, and gene flow in the Mojave rattlesnake (Crotalus scutulatus). Mol Phylogenet Evol. 2018 10; 127:669-681. PMID: 29902574.
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Card DC, Schield DR, Castoe TA. Plasticity and local adaptation explain lizard cold tolerance. Mol Ecol. 2018 05; 27(9):2173-2175. PMID: 29737602.
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Adams RH, Schield DR, Card DC, Corbin A, Castoe TA. ThetaMater: Bayesian estimation of population size parameter ? from genomic data. Bioinformatics. 2018 03 15; 34(6):1072-1073. PMID: 29194472.
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Hales NR, Schield DR, Andrew AL, Card DC, Walsh MR, Castoe TA. Contrasting gene expression programs correspond with predator-induced phenotypic plasticity within and across generations in Daphnia. Mol Ecol. 2017 Oct; 26(19):5003-5015. PMID: 28628257.
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Gamble T, Castoe TA, Nielsen SV, Banks JL, Card DC, Schield DR, Schuett GW, Booth W. The Discovery of XY Sex Chromosomes in a Boa and Python. Curr Biol. 2017 Jul 24; 27(14):2148-2153.e4. PMID: 28690112.
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Andrew AL, Perry BW, Card DC, Schield DR, Ruggiero RP, McGaugh SE, Choudhary A, Secor SM, Castoe TA. Growth and stress response mechanisms underlying post-feeding regenerative organ growth in the Burmese python. BMC Genomics. 2017 05 02; 18(1):338. PMID: 28464824.
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Adams RH, Schield DR, Card DC, Blackmon H, Castoe TA. GppFst: genomic posterior predictive simulations of FST and dXY for identifying outlier loci from population genomic data. Bioinformatics. 2017 05 01; 33(9):1414-1415. PMID: 28453670.
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Schield DR, Adams RH, Card DC, Perry BW, Pasquesi GM, Jezkova T, Portik DM, Andrew AL, Spencer CL, Sanchez EE, Fujita MK, Mackessy SP, Castoe TA. Insight into the roles of selection in speciation from genomic patterns of divergence and introgression in secondary contact in venomous rattlesnakes. Ecol Evol. 2017 06; 7(11):3951-3966. PMID: 28616190.
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Shortt JA, Card DC, Schield DR, Liu Y, Zhong B, Castoe TA, Carlton EJ, Pollock DD. Whole Genome Amplification and Reduced-Representation Genome Sequencing of Schistosoma japonicum Miracidia. PLoS Negl Trop Dis. 2017 01; 11(1):e0005292. PMID: 28107347.
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Streicher JW, McEntee JP, Drzich LC, Card DC, Schield DR, Smart U, Parkinson CL, Jezkova T, Smith EN, Castoe TA. Genetic surfing, not allopatric divergence, explains spatial sorting of mitochondrial haplotypes in venomous coralsnakes. Evolution. 2016 Jul; 70(7):1435-49. PMID: 27251954.
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Card DC, Schield DR, Adams RH, Corbin AB, Perry BW, Andrew AL, Pasquesi GI, Smith EN, Jezkova T, Boback SM, Booth W, Castoe TA. Phylogeographic and population genetic analyses reveal multiple species of Boa and independent origins of insular dwarfism. Mol Phylogenet Evol. 2016 09; 102:104-16. PMID: 27241629.
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Adams RH, Blackmon H, Reyes-Velasco J, Schield DR, Card DC, Andrew AL, Waynewood N, Castoe TA. Microsatellite landscape evolutionary dynamics across 450 million years of vertebrate genome evolution. Genome. 2016 May; 59(5):295-310. PMID: 27064176.
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Andrew AL, Card DC, Ruggiero RP, Schield DR, Adams RH, Pollock DD, Secor SM, Castoe TA. Rapid changes in gene expression direct rapid shifts in intestinal form and function in the Burmese python after feeding. Physiol Genomics. 2015 May; 47(5):147-57. PMID: 25670730.
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Schield DR, Card DC, Adams RH, Jezkova T, Reyes-Velasco J, Proctor FN, Spencer CL, Herrmann HW, Mackessy SP, Castoe TA. Incipient speciation with biased gene flow between two lineages of the Western Diamondback Rattlesnake (Crotalus atrox). Mol Phylogenet Evol. 2015 Feb; 83:213-23. PMID: 25534232.
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Jezkova T, Riddle BR, Card DC, Schield DR, Eckstut ME, Castoe TA. Genetic consequences of postglacial range expansion in two codistributed rodents (genus Dipodomys) depend on ecology and genetic locus. Mol Ecol. 2015 Jan; 24(1):83-97. PMID: 25413968.
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Reyes-Velasco J, Card DC, Andrew AL, Shaney KJ, Adams RH, Schield DR, Casewell NR, Mackessy SP, Castoe TA. Expression of venom gene homologs in diverse python tissues suggests a new model for the evolution of snake venom. Mol Biol Evol. 2015 Jan; 32(1):173-83. PMID: 25338510.
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Card DC, Schield DR, Reyes-Velasco J, Fujita MK, Andrew AL, Oyler-McCance SJ, Fike JA, Tomback DF, Ruggiero RP, Castoe TA. Two low coverage bird genomes and a comparison of reference-guided versus de novo genome assemblies. PLoS One. 2014; 9(9):e106649. PMID: 25192061.
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Castoe TA, de Koning AP, Hall KT, Card DC, Schield DR, Fujita MK, Ruggiero RP, Degner JF, Daza JM, Gu W, Reyes-Velasco J, Shaney KJ, Castoe JM, Fox SE, Poole AW, Polanco D, Dobry J, Vandewege MW, Li Q, Schott RK, Kapusta A, Minx P, Feschotte C, Uetz P, Ray DA, Hoffmann FG, Bogden R, Smith EN, Chang BS, Vonk FJ, Casewell NR, Henkel CV, Richardson MK, Mackessy SP, Bronikowski AM, Bronikowsi AM, Yandell M, Warren WC, Secor SM, Pollock DD. The Burmese python genome reveals the molecular basis for extreme adaptation in snakes. Proc Natl Acad Sci U S A. 2013 Dec 17; 110(51):20645-50. PMID: 24297902.
This graph shows the total number of publications by year, by first, middle/unknown, or last author.
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Year | Publications |
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2013 | 1 | 2014 | 4 | 2015 | 1 | 2016 | 3 | 2017 | 6 | 2018 | 9 | 2019 | 4 | 2020 | 3 | 2021 | 7 | 2022 | 7 |
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