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Thomas Jaenisch

TitleProfessor
InstitutionUniversity of Colorado Denver - Anschutz Medical Campus
DepartmentCSPH-Epidemiology General Ops
    Other Positions
    TitleDirector-Faculty
    InstitutionUniversity of Colorado Denver - Anschutz Medical Campus
    DepartmentCSPH-Epidemiology General Ops


    Collapse Bibliographic 
    Collapse selected publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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    1. Giri J, Pezzi L, Cachay R, G?lvez Ramirez RM, Tami A, Bethencourt S, Lozano A, Gotuzzo Herencia JE, Poje J, Jaenisch T, Chu M. Specimen sharing for epidemic preparedness: Building a virtual biorepository system from local governance to global partnerships. PLOS Glob Public Health. 2023; 3(10):e0001568. PMID: 37819913.
      View in: PubMed
    2. Hufstedler H, Mauer N, Yeboah E, Carr S, Rahman S, Danzer AM, Debray TPA, Jong VMT, Campbell H, Gustafson P, Maxwell L, Jaenisch T, Matthay EC, B?rnighausen T. Application of Causal Inference Methods to Pooled Longitudinal Non- Randomized Studies: A Methodological Systematic Review. Res Sq. 2023 Aug 30. PMID: 37693428.
      View in: PubMed
    3. Braga C, Martelli CMT, Souza WV, Luna CF, Albuquerque MFPM, Mariz CA, Morais CNL, Brito CAA, Melo CFCA, Lins RD, Drexler JF, Jaenisch T, Marques ETA, Viana IFT. Seroprevalence of Dengue, Chikungunya and Zika at the epicenter of the congenital microcephaly epidemic in Northeast Brazil: A population-based survey. PLoS Negl Trop Dis. 2023 Jul; 17(7):e0011270. PMID: 37399197.
      View in: PubMed
    4. Rosenberger KD, Phung Khanh L, Tobian F, Chanpheaktra N, Kumar V, Lum LCS, Sathar J, Pleit?s Sandoval E, Mar?n GM, Laksono IS, Mahendradhata Y, Sarker M, Rahman R, Caprara A, Souza Benevides B, Marques ETA, Magalhaes T, Brasil P, Amaral Calvet G, Tami A, Bethencourt SE, Dong Thi Hoai T, Nguyen Tan Thanh K, Tran Van N, Nguyen Tran N, Do Chau V, Yacoub S, Nguyen Van K, Guzm?n MG, Martinez PA, Nguyen Than Ha Q, Simmons CP, Wills BA, Geskus RB, Jaenisch T. Early diagnostic indicators of dengue versus other febrile illnesses in Asia and Latin America (IDAMS study): a multicentre, prospective, observational study. Lancet Glob Health. 2023 03; 11(3):e361-e372. PMID: 36796983.
      View in: PubMed
    5. Pluss O, Campbell H, Pezzi L, Morales I, Roell Y, Quandelacy TM, Arora RK, Boucher E, Lamb MM, Chu M, B?rnighausen T, Jaenisch T. Limitations introduced by a low participation rate of SARS-CoV-2 seroprevalence data. Int J Epidemiol. 2023 02 08; 52(1):32-43. PMID: 36164817.
      View in: PubMed
    6. Tam DTH, Clapham H, Giger E, Kieu NTT, Nam NT, Hong DTT, Nuoi BT, Cam NTH, Quyen NTH, Turner HC, Jaenisch T, Simmons CP, Lam PK, Wills B. Burden of Postinfectious Symptoms after Acute Dengue, Vietnam. Emerg Infect Dis. 2023 01; 29(1):160-163. PMID: 36573590.
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    7. Starck T, Dambach P, Rouamba T, Tinto H, Osier F, Oldenburg CE, Adam M, B?rnighausen T, Jaenisch T, Bulstra CA. The effect of malaria on childhood anemia in a quasi-experimental study of 7,384 twins from 23 Sub-Saharan African countries. Front Public Health. 2022; 10:1009865. PMID: 36561861.
      View in: PubMed
    8. Ma X, Li Z, Whelan MG, Kim D, Cao C, Yanes-Lane M, Yan T, Jaenisch T, Chu M, Clifton DA, Subissi L, Bobrovitz N, Arora RK. Serology Assays Used in SARS-CoV-2 Seroprevalence Surveys Worldwide: A Systematic Review and Meta-Analysis of Assay Features, Testing Algorithms, and Performance. Vaccines (Basel). 2022 Nov 24; 10(12). PMID: 36560415.
      View in: PubMed
    9. Jaenisch T, Lamb MM, Gallichotte EN, Adams B, Henry C, Riess J, van Sickle JT, Hawkins KL, Montague BT, Coburn C, Conners Bauer L, Kovarik J, Hernandez MT, Bronson A, Graham L, James S, Hanenberg S, Kovacs J, Spencer JS, Zabel M, Fox PD, Pluss O, Windsor W, Winstanley G, Olson D, Barer M, Berman S, Ebel G, Chu M. Investigating transmission of SARS-CoV-2 using novel face mask sampling: a protocol for an observational prospective study of index cases and their contacts in a congregate setting. BMJ Open. 2022 11 23; 12(11):e061029. PMID: 36418127.
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    10. de Jong VMT, Campbell H, Maxwell L, Jaenisch T, Gustafson P, Debray TPA. Adjusting for misclassification of an exposure in an individual participant data meta-analysis. Res Synth Methods. 2023 Mar; 14(2):193-210. PMID: 36200133.
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    11. Petzold S, Rosenberger KD, Wills B, Deen J, Weber MW, Jaenisch T. Dengue algorithms integrated into the IMCI guidelines: An updated assessment in five Southeast-Asian countries. PLoS Negl Trop Dis. 2022 10; 16(10):e0010832. PMID: 36219610.
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    12. Cable J, Fauci A, Dowling WE, G?nther S, Bente DA, Yadav PD, Madoff LC, Wang LF, Arora RK, Van Kerkhove M, Chu MC, Jaenisch T, Epstein JH, Frost SDW, Bausch DG, Hensley LE, Bergeron ?, Sitaras I, Gunn MD, Geisbert TW, Mu?oz-Fontela C, Krammer F, de Wit E, Nordenfelt P, Saphire EO, Gilbert SC, Corbett KS, Branco LM, Baize S, van Doremalen N, Krieger MA, Clemens SAC, Hesselink R, Hartman D. Lessons from the pandemic: Responding to emerging zoonotic viral diseases-a Keystone Symposia report. Ann N Y Acad Sci. 2022 12; 1518(1):209-225. PMID: 36183296.
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    13. Hassoun-Kheir N, van Werkhoven CH, Dunning J, Jaenisch T, van Beek J, Bielicki J, Butler CC, Francois B, Harbarth S, Hernandez Padilla AC, Horby P, Koopmans M, Lee J, Rodriguez-Ba?o J, Tacconelli E, Themistocleous Y, van der Velden AW, Bonten M, Goossens H, de Kraker MEA. Perpetual observational studies: new strategies to support efficient implementation of observational studies and randomized trials in infectious diseases. Clin Microbiol Infect. 2022 12; 28(12):1528-1532. PMID: 35940566.
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    14. Tacconelli E, Gorska A, Carrara E, Davis RJ, Bonten M, Friedrich AW, Glasner C, Goossens H, Hasenauer J, Abad JMH, Pe?alvo JL, Sanchez-Niubo A, Sialm A, Scipione G, Soriano G, Yazdanpanah Y, Vorstenbosch E, Jaenisch T. Challenges of data sharing in European Covid-19 projects: A learning opportunity for advancing pandemic preparedness and response. Lancet Reg Health Eur. 2022 Oct; 21:100467. PMID: 35942201.
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    15. Gallichotte EN, Windsor W, Watts S, Sexton N, Henry C, Jaenisch T, Lamb MM, Winstanley G, Adams B, Chu M, Ebel GD. Detection of SARS-CoV-2 in exhaled air using non-invasive embedded strips in masks. Am J Infect Control. 2022 08; 50(8):890-897. PMID: 35908828.
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    16. Gomez UT, Francisco RPV, Baptista FS, Gibelli MABC, Ibidi SM, Carvalho WB, Paganoti CF, Sabino EC, Silva LCOD, Jaenisch T, Mayaud P, Brizot ML. Impact of SARS-CoV-2 on pregnancy and neonatal outcomes: An open prospective study of pregnant women in Brazil. Clinics (Sao Paulo). 2022; 77:100073. PMID: 35797767.
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    17. Magalhaes T, Morais CNL, Azevedo EAN, Jacques IJAA, Castanha PMS, Cordeiro MT, Braga C, Jaenisch T, Marques ETA, Foy BD. Two-year Decay of Zika Virus Neutralizing Antibodies in People Living in an Endemic Region in Brazil. Am J Trop Med Hyg. 2022 07 13; 107(1):186-189. PMID: 35895363.
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    18. Hufstedler H, Rahman S, Danzer AM, Goymann H, de Jong VMT, Campbell H, Gustafson P, Debray TPA, Jaenisch T, Maxwell L, Matthay EC, B?rnighausen T. Systematic Review Reveals Lack of Causal Methodology Applied to Pooled Longitudinal Observational Infectious Disease Studies. J Clin Epidemiol. 2022 05; 145:29-38. PMID: 35045316.
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    19. Reguzova A, Fischer N, M?ller M, Salomon F, Jaenisch T, Amann R. A Novel Orf Virus D1701-VrV-Based Dengue Virus (DENV) Vaccine Candidate Expressing HLA-Specific T Cell Epitopes: A Proof-of-Concept Study. Biomedicines. 2021 Dec 08; 9(12). PMID: 34944678.
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    20. Cachay R, Schwalb A, Acevedo-Rodriguez JG, Merino X, Talledo M, Suarez-Ognio L, Pezzi L, de Lamballerie X, Guerra H, Jaenisch T, Gotuzzo E. Zika Virus Seroprevalence in Two Districts of Chincha, Ica, Peru: A Cross-Sectional Study. Am J Trop Med Hyg. 2021 11 22; 106(1):192-198. PMID: 34814106.
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    21. Starck T, Bulstra CA, Tinto H, Rouamba T, Sie A, Jaenisch T, B?rnighausen T. The effect of malaria on haemoglobin concentrations: a nationally representative household fixed-effects study of 17,599 children under 5?years of age in Burkina Faso. Malar J. 2021 Oct 23; 20(1):416. PMID: 34688294.
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    22. Espindola OM, Jaenisch T, Nielsen-Saines K, Oliveira RVC, Pastorino B, Vasconcelos Z, Gabaglia CR, Ribeiro IP, Cunha DCD, Pone MV, Carvalho LMA, Pone SM, Damasceno L, Zin AA, Bonaldo MC, Moreira MEL, Cherry JD, de Lamballerie X, Brasil P. ZIKA Virus Neutralizing Antibody Kinetics in Antenatally Exposed Infants. J Infect Dis. 2021 09 17; 224(6):1060-1068. PMID: 33528564.
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    23. Agbaria N, Petzold S, Deckert A, Henschke N, Veronese G, Dambach P, Jaenisch T, Horstick O, Winkler V. Prevalence of post-traumatic stress disorder among Palestinian children and adolescents exposed to political violence: A systematic review and meta-analysis. PLoS One. 2021; 16(8):e0256426. PMID: 34437595.
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    24. Campbell H, de Jong VMT, Maxwell L, Jaenisch T, Debray TPA, Gustafson P. Measurement error in meta-analysis (MEMA)-A Bayesian framework for continuous outcome data subject to non-differential measurement error. Res Synth Methods. 2021 Nov; 12(6):796-815. PMID: 34312994.
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    25. Loeffler FF, Viana IFT, Fischer N, Co?lho DF, Silva CS, Purifica??o AF, Ara?jo CMCS, Leite BHS, Dur?es-Carvalho R, Magalh?es T, Morais CNL, Cordeiro MT, Lins RD, Marques ETA, Jaenisch T. Identification of a Zika NS2B epitope as a biomarker for severe clinical phenotypes. RSC Med Chem. 2021 Sep 23; 12(9):1525-1539. PMID: 34671736.
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    26. Vuong NL, Lam PK, Ming DKY, Duyen HTL, Nguyen NM, Tam DTH, Duong Thi Hue K, Chau NV, Chanpheaktra N, Lum LCS, Pleit?s E, Simmons CP, Rosenberger KD, Jaenisch T, Bell D, Acestor N, Halleux C, Olliaro PL, Wills BA, Geskus RB, Yacoub S. Combination of inflammatory and vascular markers in the febrile phase of dengue is associated with more severe outcomes. Elife. 2021 06 22; 10. PMID: 34154705.
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    27. Vuong NL, Quyen NTH, Tien NTH, Tuan NM, Kien DTH, Lam PK, Tam DTH, Van Ngoc T, Yacoub S, Jaenisch T, Geskus RB, Simmons CP, Wills BA. Higher Plasma Viremia in the Febrile Phase Is Associated With Adverse Dengue Outcomes Irrespective of Infecting Serotype or Host Immune Status: An Analysis of 5642 Vietnamese Cases. Clin Infect Dis. 2021 06 15; 72(12):e1074-e1083. PMID: 33340040.
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    28. Maeda MFY, Brizot ML, Gibelli MABC, Ibidi SM, Carvalho WB, Hoshida MS, Machado CM, Sabino EC, Oliveira da Silva LC, Jaenisch T, Mendes-Correa MCJ, Mayaud P, Francisco RPV. Vertical transmission of SARS-CoV2 during pregnancy: A?high-risk cohort. Prenat Diagn. 2021 07; 41(8):998-1008. PMID: 34101871.
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    29. Schultz JS, McCarthy MK, Rester C, Sabourin KR, Annen K, DomBourian M, Eisenmesser E, Frazer-Abel A, Knight V, Jaenisch T, Morrison TE, Rochford R, Kedl RM. Development and Validation of a Multiplex Microsphere Immunoassay Using Dried Blood Spots for SARS-CoV-2 Seroprevalence: Application in First Responders in Colorado, USA. J Clin Microbiol. 2021 05 19; 59(6). PMID: 33795412.
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    30. Hufstedler H, Matthay EC, Rahman S, de Jong VMT, Campbell H, Gustafson P, Debray T, Jaenisch T, Maxwell L, B?rnighausen T. Current trends in the application of causal inference methods to pooled longitudinal observational infectious disease studies-A protocol for a methodological systematic review. PLoS One. 2021; 16(4):e0250778. PMID: 33914795.
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    31. Morales I, Rosenberger KD, Magalhaes T, Morais CNL, Braga C, Marques ETA, Calvet GA, Damasceno L, Brasil P, Bispo de Filippis AM, Tami A, Bethencourt S, Alvarez M, Mart?nez PA, Guzman MG, Souza Benevides B, Caprara A, Quyen NTH, Simmons CP, Wills B, de Lamballerie X, Drexler JF, Jaenisch T. Diagnostic performance of anti-Zika virus IgM, IgAM and IgG ELISAs during co-circulation of Zika, dengue, and chikungunya viruses in Brazil and Venezuela. PLoS Negl Trop Dis. 2021 04; 15(4):e0009336. PMID: 33872309.
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    32. Si? A, Hanefeld J, Chaponda M, Chico RM, LeDoare K, Mayaud P, Drexler JF, Jaenisch T. Congenital malformations in sub-Saharan Africa-warnings of a silent epidemic? Lancet Infect Dis. 2021 05; 21(5):594-596. PMID: 33773619.
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    33. Sabourin KR, Schultz J, Romero J, Lamb MM, Larremore D, Morrison TE, Frazer-Abel A, Zimmer S, Kedl RM, Jaenisch T, Rochford R. Risk Factors of SARS-CoV-2 Antibodies in Arapahoe County First Responders-The COVID-19 Arapahoe SErosurveillance Study (CASES) Project. J Occup Environ Med. 2021 03 01; 63(3):191-198. PMID: 33298759.
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    34. Magalhaes T, Morais CNL, Jacques IJAA, Azevedo EAN, Brito AM, Lima PV, Carvalho GMM, Lima ARS, Castanha PMS, Cordeiro MT, Oliveira ALS, Jaenisch T, Lamb MM, Marques ETA, Foy BD. Erratum to: Follow-Up Household Serosurvey in Northeast Brazil for Zika Virus: Sexual Contacts of Index Patients Have the Highest Risk for Seropositivity. J Infect Dis. 2021 02 24; 223(4):736. PMID: 33332568.
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    35. Magalhaes T, Morais CNL, Jacques IJAA, Azevedo EAN, Brito AM, Lima PV, Carvalho GMM, Lima ARS, Castanha PMS, Cordeiro MT, Oliveira ALS, Jaenisch T, Lamb MM, Marques ETA, Foy BD. Follow-Up Household Serosurvey in Northeast Brazil for Zika Virus: Sexual Contacts of Index Patients Have the Highest Risk for Seropositivity. J Infect Dis. 2021 02 24; 223(4):673-685. PMID: 32888023.
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    36. Camacho-Zavala E, Santacruz-Tinoco C, Mu?oz E, Chac?n-Salinas R, Salazar-Sanchez MI, Grajales C, Gonz?lez-Ibarra J, Borja-Aburto VH, Jaenisch T, Gonzalez-Bonilla CR. Pregnant Women Infected with Zika Virus Show Higher Viral Load and Immunoregulatory Cytokines Profile with CXCL10 Increase. Viruses. 2021 Jan 08; 13(1). PMID: 33430059.
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    37. Petzold S, Agbaria N, Deckert A, Dambach P, Winkler V, Drexler JF, Horstick O, Jaenisch T. Congenital abnormalities associated with Zika virus infection-Dengue as potential co-factor? A systematic review. PLoS Negl Trop Dis. 2021 01; 15(1):e0008984. PMID: 33395432.
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    38. Ades AE, Brickley EB, Alexander N, Brown D, Jaenisch T, Miranda-Filho DB, Pohl M, Rosenberger KD, Soriano-Arandes A, Thorne C, Ximenes RAA, de Ara?jo TVB, Avelino-Silva VI, Bethencourt Castillo SE, Borja Aburto VH, Brasil P, Christie CDC, de Souza WV, Gotuzzo H JE, Hoen B, Koopmans M, Martelli CMT, Martins Teixeira M, Marques ETA, Miranda MC, Montarroyos UR, Moreira ME, Morris JG, Rockx B, Saba Villarroel PM, Soria Segarra C, Tami A, Turchi MD, Giaquinto C, de Lamballerie X, Wilder-Smith A. Zika virus infection in pregnancy: a protocol for the joint analysis of the prospective cohort studies of the ZIKAlliance, ZikaPLAN and ZIKAction consortia. BMJ Open. 2020 12 15; 10(12):e035307. PMID: 33323426.
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    39. Cachay R, Schwalb A, Watanabe T, Guzman D, Jaenisch T, Guill?n-Pinto D, Gotuzzo E. Case Report: Multiorgan Involvement with Congenital Zika Syndrome. Am J Trop Med Hyg. 2020 10; 103(4):1656-1659. PMID: 32723426.
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    40. Heiss K, Heidepriem J, Fischer N, Weber LK, Dahlke C, Jaenisch T, Loeffler FF. Rapid Response to Pandemic Threats: Immunogenic Epitope Detection of Pandemic Pathogens for Diagnostics and Vaccine Development Using Peptide Microarrays. J Proteome Res. 2020 11 06; 19(11):4339-4354. PMID: 32892628.
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    41. Antia K, Boucsein J, Deckert A, Dambach P, Racaite J, ?urkiene G, Jaenisch T, Horstick O, Winkler V. Effects of International Labour Migration on the Mental Health and Well-Being of Left-Behind Children: A Systematic Literature Review. Int J Environ Res Public Health. 2020 06 17; 17(12). PMID: 32560443.
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    42. Duran P, Berman S, Niermeyer S, Jaenisch T, Forster T, Gomez Ponce de Leon R, De Mucio B, Serruya S. COVID-19 and newborn health: systematic review. Rev Panam Salud Publica. 2020; 44:e54. PMID: 32454807.
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    43. Rosenberger KD, Alexander N, Martinez E, Lum LCS, Dempfle CE, Junghanss T, Wills B, Jaenisch T. Severe dengue categories as research endpoints-Results from a prospective observational study in hospitalised dengue patients. PLoS Negl Trop Dis. 2020 03; 14(3):e0008076. PMID: 32130212.
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    44. Vuong NL, Le Duyen HT, Lam PK, Tam DTH, Vinh Chau NV, Van Kinh N, Chanpheaktra N, Lum LCS, Pleit?s E, Jones NK, Simmons CP, Rosenberger K, Jaenisch T, Halleux C, Olliaro PL, Wills B, Yacoub S. C-reactive protein as a potential biomarker for disease progression in dengue: a multi-country observational study. BMC Med. 2020 02 17; 18(1):35. PMID: 32063229.
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    45. Avelino-Silva VI, Mayaud P, Tami A, Miranda MC, Rosenberger KD, Alexander N, Nacul L, Segurado A, Pohl M, Bethencourt S, Villar LA, Viana IFT, Rabello R, Soria C, Salgado SP, Gotuzzo E, Guzm?n MG, Mart?nez PA, L?pez-Gatell H, Hegewisch-Taylor J, Borja-Aburto VH, Gonzalez C, Netto EM, Saba Villarroel PM, Hoen B, Brasil P, Marques ETA, Rockx B, Koopmans M, de Lamballerie X, Jaenisch T. Study protocol for the multicentre cohorts of Zika virus infection in pregnant women, infants, and acute clinical cases in Latin America and the Caribbean: the ZIKAlliance consortium. BMC Infect Dis. 2019 Dec 26; 19(1):1081. PMID: 31878895.
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    46. Voordouw B, Rockx B, Jaenisch T, Fraaij P, Mayaud P, Vossen A, Koopmans M. Performance of Zika Assays in the Context of Toxoplasma gondii, Parvovirus B19, Rubella Virus, and Cytomegalovirus (TORCH) Diagnostic Assays. Clin Microbiol Rev. 2019 12 18; 33(1). PMID: 31826871.
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    47. Pezzi L, LaBeaud AD, Reusken CB, Drexler JF, Vasilakis N, Diallo M, Simon F, Jaenisch T, Gallian P, Sall A, Failloux AB, Weaver SC, de Lamballerie X. GloPID-R report on chikungunya, o'nyong-nyong and Mayaro virus, part 2: Epidemiological distribution of o'nyong-nyong virus. Antiviral Res. 2019 12; 172:104611. PMID: 31545982.
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    48. Pezzi L, Rodriguez-Morales AJ, Reusken CB, Ribeiro GS, LaBeaud AD, Louren?o-de-Oliveira R, Brasil P, Lecuit M, Failloux AB, Gallian P, Jaenisch T, Simon F, Siqueira AM, Rosa-Freitas MG, Vega Rua A, Weaver SC, Drexler JF, Vasilakis N. GloPID-R report on chikungunya, o'nyong-nyong and Mayaro virus, part 3: Epidemiological distribution of Mayaro virus. Antiviral Res. 2019 12; 172:104610. PMID: 31545981.
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    49. Wilder-Smith A, Wei Y, Ara?jo TVB, VanKerkhove M, Turchi Martelli CM, Turchi MD, Teixeira M, Tami A, Souza J, Sousa P, Soriano-Arandes A, Soria-Segarra C, Sanchez Clemente N, Rosenberger KD, Reveiz L, Prata-Barbosa A, Pomar L, Pel? Rosado LE, Perez F, Passos SD, Nogueira M, Noel TP, Moura da Silva A, Moreira ME, Morales I, Miranda Montoya MC, Miranda-Filho DB, Maxwell L, Macpherson CNL, Low N, Lan Z, LaBeaud AD, Koopmans M, Kim C, Jo?o E, Jaenisch T, Hofer CB, Gustafson P, G?rardin P, Ganz JS, Dias ACF, Elias V, Duarte G, Debray TPA, Cafferata ML, Buekens P, Broutet N, Brickley EB, Brasil P, Brant F, Bethencourt S, Benedetti A, Avelino-Silva VL, Ximenes RAA, Alves da Cunha A, Alger J. Understanding the relation between Zika virus infection during pregnancy and adverse fetal, infant and child outcomes: a protocol for a systematic review and individual participant data meta-analysis of longitudinal studies of pregnant women and their infants and children. BMJ Open. 2019 06 18; 9(6):e026092. PMID: 31217315.
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    50. Messina JP, Brady OJ, Golding N, Kraemer MUG, Wint GRW, Ray SE, Pigott DM, Shearer FM, Johnson K, Earl L, Marczak LB, Shirude S, Davis Weaver N, Gilbert M, Velayudhan R, Jones P, Jaenisch T, Scott TW, Reiner RC, Hay SI. The current and future global distribution and population at risk of dengue. Nat Microbiol. 2019 09; 4(9):1508-1515. PMID: 31182801.
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    51. Lizarazo E, Couto N, Vincenti-Gonzalez M, Raangs EC, Velasco Z, Bethencourt S, Jaenisch T, Friedrich AW, Tami A, Rossen JW. Applied shotgun metagenomics approach for the genetic characterization of dengue viruses. J Biotechnol. 2019; 306S:100009. PMID: 34112375.
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    52. Brady OJ, Osgood-Zimmerman A, Kassebaum NJ, Ray SE, de Ara?jo VEM, da N?brega AA, Frutuoso LCV, Lecca RCR, Stevens A, Zoca de Oliveira B, de Lima JM, Bogoch II, Mayaud P, Jaenisch T, Mokdad AH, Murray CJL, Hay SI, Reiner RC, Marinho F. The association between Zika virus infection and microcephaly in Brazil 2015-2017: An observational analysis of over 4 million births. PLoS Med. 2019 03; 16(3):e1002755. PMID: 30835728.
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    53. Jaenisch T, Heiss K, Fischer N, Geiger C, Bischoff FR, Moldenhauer G, Rychlewski L, Si? A, Coulibaly B, Seeberger PH, Wyrwicz LS, Breitling F, Loeffler FF. High-density Peptide Arrays Help to Identify Linear Immunogenic B-cell Epitopes in Individuals Naturally Exposed to Malaria Infection. Mol Cell Proteomics. 2019 04; 18(4):642-656. PMID: 30630936.
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    54. Jaenisch T, Hendrickx K, Erpicum M, Agulto L, Tomashek KM, Dempsey W, Siqueira JB, Marks MA, Fay MP, Laughlin C, L'Azou M, Leo YS, Narvaez F, Teyssou R, Thomas SJ, Tissera H, Wallace D, Wilder-Smith A, Gubler DJ, Cassetti MC. Development of standard clinical endpoints for use in dengue interventional trials: introduction and methodology. BMC Med Res Methodol. 2018 11 15; 18(1):134. PMID: 30442099.
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    55. Koopmans M, de Lamballerie X, Jaenisch T. Familiar barriers still unresolved-a perspective on the Zika virus outbreak research response. Lancet Infect Dis. 2019 02; 19(2):e59-e62. PMID: 30420230.
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    56. Tomashek KM, Wills B, See Lum LC, Thomas L, Durbin A, Leo YS, de Bosch N, Rojas E, Hendrickx K, Erpicum M, Agulto L, Jaenisch T, Tissera H, Suntarattiwong P, Collers BA, Wallace D, Schmidt AC, Precioso A, Narvaez F, Thomas SJ, Edelman R, Siqueira JB, Cassetti MC, Dempsey W, Gubler DJ. Development of standard clinical endpoints for use in dengue interventional trials. PLoS Negl Trop Dis. 2018 10; 12(10):e0006497. PMID: 30286085.
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    57. O'Reilly KM, Lowe R, Edmunds WJ, Mayaud P, Kucharski A, Eggo RM, Funk S, Bhatia D, Khan K, Kraemer MUG, Wilder-Smith A, Rodrigues LC, Brasil P, Massad E, Jaenisch T, Cauchemez S, Brady OJ, Yakob L. Projecting the end of the Zika virus epidemic in Latin America: a modelling analysis. BMC Med. 2018 10 03; 16(1):180. PMID: 30285863.
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    58. Moreira-Soto A, Cabral R, Pedroso C, Eschbach-Bludau M, Rockstroh A, Vargas LA, Postigo-Hidalgo I, Luz E, Sampaio GS, Drosten C, Netto EM, Jaenisch T, Ulbert S, Sarno M, Brites C, Drexler JF. Exhaustive TORCH Pathogen Diagnostics Corroborate Zika Virus Etiology of Congenital Malformations in Northeastern Brazil. mSphere. 2018 08 08; 3(4). PMID: 30089647.
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    59. Lizarazo E, Couto N, Vincenti-Gonzalez M, Raangs EC, Jaenisch T, Friedrich AW, Tami A, Rossen JW. Complete Coding Sequences of Five Dengue Virus Type 2 Clinical Isolates from Venezuela Obtained through Shotgun Metagenomics. Genome Announc. 2018 Jun 21; 6(25). PMID: 29930056.
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    60. R?ltgen K, Rose N, Ruggieri A, Warryn L, Scherr N, Pinho-Nascimento CA, Tamborrini M, Jaenisch T, Pluschke G. Development of Dengue Virus Serotype-Specific NS1 Capture Assays for the Rapid and Highly Sensitive Identification of the Infecting Serotype in Human Sera. J Immunol. 2018 06 01; 200(11):3857-3866. PMID: 29661824.
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    61. Saba Villarroel PM, Nurtop E, Pastorino B, Roca Y, Drexler JF, Gallian P, Jaenisch T, Leparc-Goffart I, Priet S, Ninove L, de Lamballerie X. Zika virus epidemiology in Bolivia: A seroprevalence study in volunteer blood donors. PLoS Negl Trop Dis. 2018 03; 12(3):e0006239. PMID: 29513667.
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    62. Netto EM, Moreira-Soto A, Pedroso C, H?ser C, Funk S, Kucharski AJ, Rockstroh A, K?mmerer BM, Sampaio GS, Luz E, Vaz SN, Dias JP, Bastos FA, Cabral R, Kistemann T, Ulbert S, de Lamballerie X, Jaenisch T, Brady OJ, Drosten C, Sarno M, Brites C, Drexler JF. High Zika Virus Seroprevalence in Salvador, Northeastern Brazil Limits the Potential for Further Outbreaks. mBio. 2017 11 14; 8(6). PMID: 29138300.
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    63. Magalhaes T, Braga C, Cordeiro MT, Oliveira ALS, Castanha PMS, Maciel APR, Amancio NML, Gouveia PN, Peixoto-da-Silva VJ, Peixoto TFL, Britto H, Lima PV, Lima ARS, Rosenberger KD, Jaenisch T, Marques ETA. Zika virus displacement by a chikungunya outbreak in Recife, Brazil. PLoS Negl Trop Dis. 2017 Nov; 11(11):e0006055. PMID: 29108009.
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    64. Freire MCLC, Pol-Fachin L, Co?lho DF, Viana IFT, Magalh?es T, Cordeiro MT, Fischer N, Loeffler FF, Jaenisch T, Franca RF, Marques ETA, Lins RD. Mapping Putative B-Cell Zika Virus NS1 Epitopes Provides Molecular Basis for Anti-NS1 Antibody Discrimination between Zika and Dengue Viruses. ACS Omega. 2017 Jul 31; 2(7):3913-3920. PMID: 30023708.
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    65. Whitehorn J, Kien DTH, Quyen NTH, Wills B, Van Vinh Chau N, Tam DTH, Tuan NM, Jaenisch T, Hibberd M, Khor CC, Simmons CP. Genetic variants of MICB and PLCE1 and associations with the laboratory features of dengue. BMC Infect Dis. 2017 06 09; 17(1):412. PMID: 28599625.
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    66. Faria NR, Quick J, Claro IM, Th?z? J, de Jesus JG, Giovanetti M, Kraemer MUG, Hill SC, Black A, da Costa AC, Franco LC, Silva SP, Wu CH, Raghwani J, Cauchemez S, du Plessis L, Verotti MP, de Oliveira WK, Carmo EH, Coelho GE, Santelli ACFS, Vinhal LC, Henriques CM, Simpson JT, Loose M, Andersen KG, Grubaugh ND, Somasekar S, Chiu CY, Mu?oz-Medina JE, Gonzalez-Bonilla CR, Arias CF, Lewis-Ximenez LL, Baylis SA, Chieppe AO, Aguiar SF, Fernandes CA, Lemos PS, Nascimento BLS, Monteiro HAO, Siqueira IC, de Queiroz MG, de Souza TR, Bezerra JF, Lemos MR, Pereira GF, Loudal D, Moura LC, Dhalia R, Fran?a RF, Magalh?es T, Marques ET, Jaenisch T, Wallau GL, de Lima MC, Nascimento V, de Cerqueira EM, de Lima MM, Mascarenhas DL, Neto JPM, Levin AS, Tozetto-Mendoza TR, Fonseca SN, Mendes-Correa MC, Milagres FP, Segurado A, Holmes EC, Rambaut A, Bedford T, Nunes MRT, Sabino EC, Alcantara LCJ, Loman NJ, Pybus OG. Establishment and cryptic transmission of Zika virus in Brazil and the Americas. Nature. 2017 06 15; 546(7658):406-410. PMID: 28538727.
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    67. Chotiwan N, Brewster CD, Magalhaes T, Weger-Lucarelli J, Duggal NK, R?ckert C, Nguyen C, Garcia Luna SM, Fauver JR, Andre B, Gray M, Black WC, Kading RC, Ebel GD, Kuan G, Balmaseda A, Jaenisch T, Marques ETA, Brault AC, Harris E, Foy BD, Quackenbush SL, Perera R, Rovnak J. Rapid and specific detection of Asian- and African-lineage Zika viruses. Sci Transl Med. 2017 05 03; 9(388). PMID: 28469032.
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    68. Jaenisch T, Rosenberger KD, Brito C, Brady O, Brasil P, Marques ET. Risk of microcephaly after Zika virus infection in Brazil, 2015 to 2016. Bull World Health Organ. 2017 Mar 01; 95(3):191-198. PMID: 28250532.
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    69. Weber LK, Palermo A, K?gler J, Armant O, Isse A, Rentschler S, Jaenisch T, Hubbuch J, D?bel S, Nesterov-Mueller A, Breitling F, Loeffler FF. Single amino acid fingerprinting of the human antibody repertoire with high density peptide arrays. J Immunol Methods. 2017 04; 443:45-54. PMID: 28167275.
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    70. Van Kerkhove MD, Reveiz L, Souza JP, Jaenisch T, Carson G, Broutet N. Harmonisation of Zika virus research protocols to address key public health concerns. Lancet Glob Health. 2016 12; 4(12):e911-e912. PMID: 27815145.
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    71. Deen J, Weber MW, Jaenisch T. Dengue in the Context of the Integrated Management of Childhood Illness. PLoS Negl Trop Dis. 2016 08; 10(8):e0004838. PMID: 27559725.
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    72. Messina JP, Kraemer MU, Brady OJ, Pigott DM, Shearer FM, Weiss DJ, Golding N, Ruktanonchai CW, Gething PW, Cohn E, Brownstein JS, Khan K, Tatem AJ, Jaenisch T, Murray CJ, Marinho F, Scott TW, Hay SI. Mapping global environmental suitability for Zika virus. Elife. 2016 04 19; 5. PMID: 27090089.
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    73. Brasil P, Calvet GA, Siqueira AM, Wakimoto M, de Sequeira PC, Nobre A, Quintana Mde S, Mendon?a MC, Lupi O, de Souza RV, Romero C, Zogbi H, Bressan Cda S, Alves SS, Louren?o-de-Oliveira R, Nogueira RM, Carvalho MS, de Filippis AM, Jaenisch T. Zika Virus Outbreak in Rio de Janeiro, Brazil: Clinical Characterization, Epidemiological and Virological Aspects. PLoS Negl Trop Dis. 2016 Apr; 10(4):e0004636. PMID: 27070912.
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    74. Jaenisch T, Tam DT, Kieu NT, Van Ngoc T, Nam NT, Van Kinh N, Yacoub S, Chanpheaktra N, Kumar V, See LL, Sathar J, Sandoval EP, Alfaro GM, Laksono IS, Mahendradhata Y, Sarker M, Ahmed F, Caprara A, Benevides BS, Marques ET, Magalhaes T, Brasil P, Netto M, Tami A, Bethencourt SE, Guzman M, Simmons C, Quyen NT, Merson L, Dung NT, Beck D, Wirths M, Wolbers M, Lam PK, Rosenberger K, Wills B. Clinical evaluation of dengue and identification of risk factors for severe disease: protocol for a multicentre study in 8 countries. BMC Infect Dis. 2016 Mar 11; 16:120. PMID: 26968374.
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    75. Rosenberger KD, Lum L, Alexander N, Junghanss T, Wills B, Jaenisch T. Vascular leakage in dengue--clinical spectrum and influence of parenteral fluid therapy. Trop Med Int Health. 2016 Mar; 21(3):445-53. PMID: 26752720.
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    76. Tappe D, P?rez-Gir?n JV, Zammarchi L, Rissland J, Ferreira DF, Jaenisch T, G?mez-Medina S, G?nther S, Bartoloni A, Mu?oz-Fontela C, Schmidt-Chanasit J. Cytokine kinetics of Zika virus-infected patients from acute to reconvalescent phase. Med Microbiol Immunol. 2016 Jun; 205(3):269-73. PMID: 26702627.
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    77. Jaenisch T, Junghanss T, Wills B, Brady OJ, Eckerle I, Farlow A, Hay SI, McCall PJ, Messina JP, Ofula V, Sall AA, Sakuntabhai A, Velayudhan R, Wint GR, Zeller H, Margolis HS, Sankoh O. Dengue expansion in Africa-not recognized or not happening? Emerg Infect Dis. 2014 Oct; 20(10). PMID: 25271370.
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    78. Horstick O, Jaenisch T, Martinez E, Kroeger A, See LLC, Farrar J, Ranzinger SR. Comparing the usefulness of the 1997 and 2009 WHO dengue case classification: a systematic literature review. Am J Trop Med Hyg. 2014 Sep; 91(3):621-634. PMID: 24957540.
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    79. Jaenisch T, Sakuntabhai A, Wilder-Smith A. Dengue research funded by the European Commission-scientific strategies of three European dengue research consortia. PLoS Negl Trop Dis. 2013; 7(12):e2320. PMID: 24349584.
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    80. Farrar JJ, Hien TT, Horstick O, Hung NT, Jaenisch T, Junghanns T, Kroeger A, Laksono IS, Lum L, Martinez E, Simmons CP, Tami A, Tomashek KM, Wills BA. Dogma in classifying dengue disease. Am J Trop Med Hyg. 2013 Aug; 89(2):198-201. PMID: 23926138.
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    81. Bhatt S, Gething PW, Brady OJ, Messina JP, Farlow AW, Moyes CL, Drake JM, Brownstein JS, Hoen AG, Sankoh O, Myers MF, George DB, Jaenisch T, Wint GR, Simmons CP, Scott TW, Farrar JJ, Hay SI. The global distribution and burden of dengue. Nature. 2013 Apr 25; 496(7446):504-7. PMID: 23563266.
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    82. Jaenisch T, Sazawal S, Dutta A, Deb S, Ramsan M, Sullivan DJ. Contributions of polyclonal malaria, gametocytemia, and pneumonia to infant severe anemia incidence in malaria hyperendemic Pemba, Tanzania. Am J Trop Med Hyg. 2012 Jun; 86(6):925-30. PMID: 22665595.
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    83. Barniol J, Gaczkowski R, Barbato EV, da Cunha RV, Salgado D, Mart?nez E, Segarra CS, Pleites Sandoval EB, Mishra A, Laksono IS, Lum LC, Mart?nez JG, N?nez A, Balsameda A, Allende I, Ram?rez G, Dimaano E, Thomacheck K, Akbar NA, Ooi EE, Villegas E, Hien TT, Farrar J, Horstick O, Kroeger A, Jaenisch T. Usefulness and applicability of the revised dengue case classification by disease: multi-centre study in 18 countries. BMC Infect Dis. 2011 Apr 21; 11:106. PMID: 21510901.
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    84. Guzman MG, Jaenisch T, Gaczkowski R, Ty Hang VT, Sekaran SD, Kroeger A, Vazquez S, Ruiz D, Martinez E, Mercado JC, Balmaseda A, Harris E, Dimano E, Leano PS, Yoksan S, Villegas E, Benduzu H, Villalobos I, Farrar J, Simmons CP. Multi-country evaluation of the sensitivity and specificity of two commercially-available NS1 ELISA assays for dengue diagnosis. PLoS Negl Trop Dis. 2010 Aug 31; 4(8). PMID: 20824173.
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    85. Jaenisch T, Sullivan DJ, Dutta A, Deb S, Ramsan M, Othman MK, Gaczkowski R, Tielsch J, Sazawal S. Malaria incidence and prevalence on Pemba island before the onset of the successful control intervention on the Zanzibar archipelago. Malar J. 2010 Jan 25; 9:32. PMID: 20100352.
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    86. Santamaria R, Martinez E, Kratochwill S, Soria C, Tan LH, Nu?ez A, Dimaano E, Villegas E, Bendez? H, Kroeger A, Castelobranco I, Siqueira JB, Jaenisch T, Horstick O, Lum LC. Comparison and critical appraisal of dengue clinical guidelines and their use in Asia and Latin America. Int Health. 2009 Dec; 1(2):133-40. PMID: 24036557.
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    87. Mlambo G, Sullivan D, Mutambu SL, Soko W, Mbedzi J, Chivenga J, Jaenisch T, Gemperli A, Kumar N. Analysis of genetic polymorphism in select vaccine candidate antigens and microsatellite loci in Plasmodium falciparum from endemic areas at varying altitudes. Acta Trop. 2007 Jun; 102(3):201-5. PMID: 17568548.
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