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Brad K Bendiak

TitleAssociate Professor
InstitutionUniversity of Colorado Denver - Anschutz Medical Campus
DepartmentSOM-Cell and Devopmental Bio
Phone303/724-3453

    Collapse Bibliographic 
    Collapse selected publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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    1. Morrison KA, Bendiak BK, Clowers BH. Assessment of Dimeric Metal-Glycan Adducts via Isotopic Labeling and Ion Mobility-Mass Spectrometry. J Am Soc Mass Spectrom. 2018 08; 29(8):1638-1649. PMID: 29802562.
      View in: PubMed
    2. Sheikh MO, Thieker D, Chalmers G, Schafer CM, Ishihara M, Azadi P, Woods RJ, Glushka JN, Bendiak B, Prestegard JH, West CM. O2 sensing-associated glycosylation exposes the F-box-combining site of the Dictyostelium Skp1 subunit in E3 ubiquitin ligases. J Biol Chem. 2017 11 17; 292(46):18897-18915. PMID: 28928219.
      View in: PubMed
    3. Morrison KA, Bendiak BK, Clowers BH. Enhanced Mixture Separations of Metal Adducted Tetrasaccharides Using Frequency Encoded Ion Mobility Separations and Tandem Mass Spectrometry. J Am Soc Mass Spectrom. 2017 Apr; 28(4):664-677. PMID: 27796835.
      View in: PubMed
    4. Pearson WL, Contreras C, Powell D, Berden G, Oomens J, Bendiak B, Eyler JR. Differentiation of Rubidiated Methyl-d-Glycoside Stereoisomers by Infrared Multiple-Photon Dissociation Spectroscopy in the O-H and C-H Stretching Regions. J Phys Chem B. 2015 Oct 15; 119(41):12970-81. PMID: 26393375.
      View in: PubMed
    5. Li H, Bendiak B, Siems WF, Gang DR, Hill HH. Determining the isomeric heterogeneity of neutral oligosaccharide-alditols of bovine submaxillary mucin using negative ion traveling wave ion mobility mass spectrometry. Anal Chem. 2015 Feb 17; 87(4):2228-35. PMID: 25594283.
      View in: PubMed
    6. Konda C, Londry FA, Bendiak B, Xia Y. Assignment of the stereochemistry and anomeric configuration of sugars within oligosaccharides via overlapping disaccharide ladders using MS(n). J Am Soc Mass Spectrom. 2014 Aug; 25(8):1441-50. PMID: 24722900.
      View in: PubMed
    7. Li H, Bendiak B, Siems WF, Gang DR, Hill HH. Ion mobility mass spectrometry analysis of isomeric disaccharide precursor, product and cluster ions. Rapid Commun Mass Spectrom. 2013 Dec 15; 27(23):2699-709. PMID: 24591031.
      View in: PubMed
    8. Konda C, Bendiak B, Xia Y. Linkage determination of linear oligosaccharides by MS(n) (n > 2) collision-induced dissociation of Z1 ions in the negative ion mode. J Am Soc Mass Spectrom. 2014 Feb; 25(2):248-57. PMID: 24297470.
      View in: PubMed
    9. Li H, Bendiak B, Kaplan K, Davis E, Siems WF, Hill HH. Evaluation of ion mobility-mass spectrometry for determining the isomeric heterogeneity of oligosaccharide-alditols derived from bovine submaxillary mucin. Int J Mass Spectrom. 2013 Oct 15; 352:9-18. PMID: 24634605.
      View in: PubMed
    10. Li H, Bendiak B, Siems WF, Gang DR, Hill HH. Ion Mobility-Mass Correlation Trend Line Separation of Glycoprotein Digests without Deglycosylation. Int J Ion Mobil Spectrom. 2013 Jun 01; 16(2):105-115. PMID: 23914139.
      View in: PubMed
    11. Li H, Bendiak B, Siems WF, Gang DR, Hill HH. Carbohydrate structure characterization by tandem ion mobility mass spectrometry (IMMS)2. Anal Chem. 2013 Mar 05; 85(5):2760-9. PMID: 23330948.
      View in: PubMed
    12. Li H, Giles K, Bendiak B, Kaplan K, Siems WF, Hill HH. Resolving structural isomers of monosaccharide methyl glycosides using drift tube and traveling wave ion mobility mass spectrometry. Anal Chem. 2012 Apr 03; 84(7):3231-9. PMID: 22339760.
      View in: PubMed
    13. Lin Z, Bendiak B, Rubtsov IV. Discrimination between coupling networks of glucopyranosides varying at a single stereocenter using two-dimensional vibrational correlation spectroscopy. Phys Chem Chem Phys. 2012 May 14; 14(18):6179-91. PMID: 22245978.
      View in: PubMed
    14. Konda C, Bendiak B, Xia Y. Differentiation of the stereochemistry and anomeric configuration for 1-3 linked disaccharides via tandem mass spectrometry and 18O-labeling. J Am Soc Mass Spectrom. 2012 Feb; 23(2):347-58. PMID: 22095166.
      View in: PubMed
    15. Stefan SE, Ehsan M, Pearson WL, Aksenov A, Boginski V, Bendiak B, Eyler JR. Differentiation of closely related isomers: application of data mining techniques in conjunction with variable wavelength infrared multiple photon dissociation mass spectrometry for identification of glucose-containing disaccharide ions. Anal Chem. 2011 Nov 15; 83(22):8468-76. PMID: 21954928.
      View in: PubMed
    16. Brown DJ, Stefan SE, Berden G, Steill JD, Oomens J, Eyler JR, Bendiak B. Direct evidence for the ring opening of monosaccharide anions in the gas phase: photodissociation of aldohexoses and aldohexoses derived from disaccharides using variable-wavelength infrared irradiation in the carbonyl stretch region. Carbohydr Res. 2011 Nov 08; 346(15):2469-81. PMID: 21906727.
      View in: PubMed
    17. van der Wel H, Johnson JM, Xu Y, Karunaratne CV, Wilson KD, Vohra Y, Boons GJ, Taylor CM, Bendiak B, West CM. Requirements for Skp1 processing by cytosolic prolyl 4(trans)-hydroxylase and a-N-acetylglucosaminyltransferase enzymes involved in O2 signaling in dictyostelium. Biochemistry. 2011 Mar 15; 50(10):1700-13. PMID: 21247092.
      View in: PubMed
    18. Bendiak B, Fang TT. Assignment of the stereochemistry and anomeric configuration of structurally informative product ions derived from disaccharides: infrared photodissociation of glycosyl-glycolaldehydes in the negative ion mode. Carbohydr Res. 2010 Nov 02; 345(16):2390-400. PMID: 20887979.
      View in: PubMed
    19. Zhu M, Bendiak B, Clowers B, Hill HH. Ion mobility-mass spectrometry analysis of isomeric carbohydrate precursor ions. Anal Bioanal Chem. 2009 Aug; 394(7):1853-67. PMID: 19562326.
      View in: PubMed
    20. Douglas JT, Latham MP, Armstrong GS, Bendiak B, Pardi A. High-resolution pyrimidine- and ribose-specific 4D HCCH-COSY spectra of RNA using the filter diagonalization method. J Biomol NMR. 2008 Aug; 41(4):209-19. PMID: 18626775.
      View in: PubMed
    21. Fang TT, Bendiak B. The stereochemical dependence of unimolecular dissociation of monosaccharide-glycolaldehyde anions in the gas phase: a basis for assignment of the stereochemistry and anomeric configuration of monosaccharides in oligosaccharides by mass spectrometry via a key discriminatory product ion of disaccharide fragmentation, m/z 221. J Am Chem Soc. 2007 Aug 08; 129(31):9721-36. PMID: 17629269.
      View in: PubMed
    22. Dwivedi P, Bendiak B, Clowers BH, Hill HH. Rapid resolution of carbohydrate isomers by electrospray ionization ambient pressure ion mobility spectrometry-time-of-flight mass spectrometry (ESI-APIMS-TOFMS). J Am Soc Mass Spectrom. 2007 Jul; 18(7):1163-75. PMID: 17532226.
      View in: PubMed
    23. Fang TT, Zirrolli J, Bendiak B. Differentiation of the anomeric configuration and ring form of glucosyl-glycolaldehyde anions in the gas phase by mass spectrometry: isomeric discrimination between m/z 221 anions derived from disaccharides and chemical synthesis of m/z 221 standards. Carbohydr Res. 2007 Feb 05; 342(2):217-35. PMID: 17184755.
      View in: PubMed
    24. Armstrong GS, Bendiak B. High-resolution four-dimensional carbon-correlated 1H-1H ROESY experiments employing isotags and the filter diagonalization method for effective assignment of glycosidic linkages in oligosaccharides. J Magn Reson. 2006 Jul; 181(1):79-88. PMID: 16621633.
      View in: PubMed
    25. Polfer NC, Valle JJ, Moore DT, Oomens J, Eyler JR, Bendiak B. Differentiation of isomers by wavelength-tunable infrared multiple-photon dissociation-mass spectrometry: application to glucose-containing disaccharides. Anal Chem. 2006 Feb 01; 78(3):670-9. PMID: 16448038.
      View in: PubMed
    26. Clowers BH, Dwivedi P, Steiner WE, Hill HH, Bendiak B. Separation of sodiated isobaric disaccharides and trisaccharides using electrospray ionization-atmospheric pressure ion mobility-time of flight mass spectrometry. J Am Soc Mass Spectrom. 2005 May; 16(5):660-9. PMID: 15862767.
      View in: PubMed
    27. Armstrong GS, Bendiak B. The single basis filter diagonalization method: a rapid multidimensional data processing scheme. J Magn Reson. 2005 May; 174(1):163-70. PMID: 15809183.
      View in: PubMed
    28. Armstrong GS, Mandelshtam VA, Shaka AJ, Bendiak B. Rapid high-resolution four-dimensional NMR spectroscopy using the filter diagonalization method and its advantages for detailed structural elucidation of oligosaccharides. J Magn Reson. 2005 Mar; 173(1):160-8. PMID: 15705524.
      View in: PubMed
    29. Armstrong GS, Cano KE, Mandelshtam VA, Shaka AJ, Bendiak B. Rapid 3D NMR using the filter diagonalization method: application to oligosaccharides derivatized with 13C-labeled acetyl groups. J Magn Reson. 2004 Sep; 170(1):156-63. PMID: 15324769.
      View in: PubMed
    30. Bendiak B. Sensitive through-space dipolar correlations between nuclei of small organic molecules by partial alignment in a deuterated liquid solvent. J Am Chem Soc. 2002 Dec 18; 124(50):14862-3. PMID: 12475324.
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    31. Bendiak B, Fang TT. End-group determination of oligosaccharides: a gas chromatography-mass spectrometry/mass spectrometry method for distinguishing between all D-aldohexoses and D-ketohexoses. Carbohydr Res. 2000 Aug 07; 327(4):463-81. PMID: 10990032.
      View in: PubMed
    32. Jones DN, Bendiak B. Novel multi-dimensional heteronuclear NMR techniques for the study of 13C-O-acetylated oligosaccharides: expanding the dimensions for carbohydrate structures. J Biomol NMR. 1999 Oct; 15(2):157-68. PMID: 10605089.
      View in: PubMed
    33. Bendiak B. Nuclear magnetic resonance spectroscopy of peracetylated oligosaccharides having 13C-labeled carbonyl groups in lieu of permethylation analysis for establishing linkage substitutions of sugars. Carbohydr Res. 1999 Feb 28; 315(3-4):206-21. PMID: 10399295.
      View in: PubMed
    34. M?rtensson S, Levery SB, Fang TT, Bendiak B. Neutral core oligosaccharides of bovine submaxillary mucin--use of lead tetraacetate in the cold for establishing branch positions. Eur J Biochem. 1998 Dec 01; 258(2):603-22. PMID: 9874229.
      View in: PubMed
    35. Bendiak B. Preparation, conformation, and mild hydrolysis of 1-glycosyl-2-acetylhydrazines of the hexoses, pentoses, 2-acetamido-2-deoxyhexoses, and fucose. Carbohydr Res. 1997 Oct 28; 304(1):85-90. PMID: 9403998.
      View in: PubMed
    36. Tan J, D'Agostaro AF, Bendiak B, Reck F, Sarkar M, Squire JA, Leong P, Schachter H. The human UDP-N-acetylglucosamine: alpha-6-D-mannoside-beta-1,2- N-acetylglucosaminyltransferase II gene (MGAT2). Cloning of genomic DNA, localization to chromosome 14q21, expression in insect cells and purification of the recombinant protein. Eur J Biochem. 1995 Jul 15; 231(2):317-28. PMID: 7635144.
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    37. D'Agostaro GA, Zingoni A, Moritz RL, Simpson RJ, Schachter H, Bendiak B. Molecular cloning and expression of cDNA encoding the rat UDP-N-acetylglucosamine:alpha-6-D-mannoside beta-1,2-N-acetylglucosaminyltransferase II. J Biol Chem. 1995 Jun 23; 270(25):15211-21. PMID: 7797505.
      View in: PubMed
    38. Bendiak B, Ward LD, Simpson RJ. Proteins of the Golgi apparatus. Purification to homogeneity, N-terminal sequence, and unusually large Stokes radius of the membrane-bound form of UDP-galactose:N-acetylglucosamine beta 1-4galactosyltransferase from rat liver. Eur J Biochem. 1993 Sep 01; 216(2):405-17. PMID: 8375379.
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    39. Bendiak B. A common peptide stretch among enzymes localized to the Golgi apparatus: structural similarity of Golgi-associated glycosyltransferases. Biochem Biophys Res Commun. 1990 Jul 31; 170(2):879-82. PMID: 2383270.
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    40. Townsend RR, Hardy MR, Cumming DA, Carver JP, Bendiak B. Separation of branched sialylated oligosaccharides using high-pH anion-exchange chromatography with pulsed amperometric detection. Anal Biochem. 1989 Oct; 182(1):1-8. PMID: 2481411.
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    41. Bendiak B, Harris-Brandts M, Michnick SW, Carver JP, Cumming DA. Separation of the complex asparagine-linked oligosaccharides of the glycoprotein fetuin and elucidation of three triantennary structures having sialic acids linked only to galactose residues. Biochemistry. 1989 Jul 25; 28(15):6491-9. PMID: 2477056.
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    42. Cumming DA, Hellerqvist CG, Harris-Brandts M, Michnick SW, Carver JP, Bendiak B. Structures of asparagine-linked oligosaccharides of the glycoprotein fetuin having sialic acid linked to N-acetylglucosamine. Biochemistry. 1989 Jul 25; 28(15):6500-12. PMID: 2477057.
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    43. D'Agostaro G, Bendiak B, Tropak M. Cloning of cDNA encoding the membrane-bound form of bovine beta 1,4-galactosyltransferase. Eur J Biochem. 1989 Jul 15; 183(1):211-7. PMID: 2502398.
      View in: PubMed
    44. Bendiak B, Orr J, Brockhausen I, Vella G, Phoebe C. Separation of neutral reducing oligosaccharides derived from glycoproteins by HPLC on a hydroxylated polymeric support. Anal Biochem. 1988 Nov 15; 175(1):96-105. PMID: 3245581.
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    45. Bendiak B, Schachter H. Control of glycoprotein synthesis. Purification of UDP-N-acetylglucosamine:alpha-D-mannoside beta 1-2 N-acetylglucosaminyltransferase II from rat liver. J Biol Chem. 1987 Apr 25; 262(12):5775-83. PMID: 2952644.
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    46. Bendiak B, Schachter H. Control of glycoprotein synthesis. Kinetic mechanism, substrate specificity, and inhibition characteristics of UDP-N-acetylglucosamine:alpha-D-mannoside beta 1-2 N-acetylglucosaminyltransferase II from rat liver. J Biol Chem. 1987 Apr 25; 262(12):5784-90. PMID: 2952645.
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    47. Bendiak B, Cumming DA. Purification of oligosaccharides having a free reducing-end from glycopeptide sources. Carbohydr Res. 1986 Aug 15; 151:89-103. PMID: 2429766.
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    48. Bendiak B, Cumming DA. Hydrazinolysis-N-reacetylation of glycopeptides and glycoproteins. Model studies using 2-acetamido-1-N-(L-aspart-4-oyl)-2-deoxy-beta-D-glucopyranosy lamine. Carbohydr Res. 1985 Nov 15; 144(1):1-12. PMID: 4075333.
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    49. Bendiak B, Cook GM. Comparative rates of transfer of N-acetylneuraminic acid to acceptors bearing one or more Gal(beta 1-4)GlcNAc terminus by the Gal(beta 1-4)GlcNAc(NeuAc-Gal) (alpha 2-6)-sialyltransferase from embryonic chicken liver. Utilization of oligosaccharides as acceptors in sialyltransferase assays. Biochem J. 1983 Jul 01; 213(1):253-60. PMID: 6615429.
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    50. Bendiak B, Cook GM. Kinetic parameters of a beta-D-galactoside alpha 2 leads to 6 sialyltransferase from embryonic chicken liver. Eur J Biochem. 1982 Nov 15; 128(2-3):355-62. PMID: 6759114.
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    51. Bendiak B, Zalik SE. The specificity of sialyltransferase activity in smooth membrane fractions of embryonic chicken liver. Can J Biochem. 1981 Mar; 59(3):171-80. PMID: 7225924.
      View in: PubMed
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