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Quentin Jerome Vicens

TitleAsst Professor-Research
InstitutionUniversity of Colorado Denver - Anschutz Medical Campus
DepartmentSOM-BioChem&Molecular Genetics

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    Collapse selected publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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    1. Steckelberg AL, Vicens Q, Kieft JS. Exoribonuclease-Resistant RNAs Exist within both Coding and Noncoding Subgenomic RNAs. MBio. 2018 Dec 18; 9(6). PMID: 30563900.
      View in: PubMed
    2. Vicens Q, Kieft JS, Rissland OS. Revisiting the Closed-Loop Model and the Nature of mRNA 5'-3' Communication. Mol Cell. 2018 Dec 06; 72(5):805-812. PMID: 30526871.
      View in: PubMed
    3. Vicens Q, Mondragón E, Reyes FE, Coish P, Aristoff P, Berman J, Kaur H, Kells KW, Wickens P, Wilson J, Gadwood RC, Schostarez HJ, Suto RK, Blount KF, Batey RT. Structure-Activity Relationship of Flavin Analogues That Target the Flavin Mononucleotide Riboswitch. ACS Chem Biol. 2018 Oct 19; 13(10):2908-2919. PMID: 30107111.
      View in: PubMed
    4. D'Ascenzo L, Vicens Q, Auffinger P. Identification of receptors for UNCG and GNRA Z-turns and their occurrence in rRNA. Nucleic Acids Res. 2018 Sep 06; 46(15):7989-7997. PMID: 29986118.
      View in: PubMed
    5. Brito Querido J, Mancera-Martínez E, Vicens Q, Bochler A, Chicher J, Simonetti A, Hashem Y. The cryo-EM Structure of a Novel 40S Kinetoplastid-Specific Ribosomal Protein. Structure. 2017 12 05; 25(12):1785-1794.e3. PMID: 29107485.
      View in: PubMed
    6. Gross L, Vicens Q, Einhorn E, Noireterre A, Schaeffer L, Kuhn L, Imler JL, Eriani G, Meignin C, Martin F. The IRES5'UTR of the dicistrovirus cricket paralysis virus is a type III IRES containing an essential pseudoknot structure. Nucleic Acids Res. 2017 Sep 06; 45(15):8993-9004. PMID: 28911115.
      View in: PubMed
    7. Khusainov I, Vicens Q, Ayupov R, Usachev K, Myasnikov A, Simonetti A, Validov S, Kieffer B, Yusupova G, Yusupov M, Hashem Y. Structures and dynamics of hibernating ribosomes from Staphylococcus aureus mediated by intermolecular interactions of HPF. EMBO J. 2017 07 14; 36(14):2073-2087. PMID: 28645916.
      View in: PubMed
    8. D'Ascenzo L, Leonarski F, Vicens Q, Auffinger P. Revisiting GNRA and UNCG folds: U-turns versus Z-turns in RNA hairpin loops. RNA. 2017 03; 23(3):259-269. PMID: 27999116.
      View in: PubMed
    9. Khusainov I, Vicens Q, Bochler A, Grosse F, Myasnikov A, Ménétret JF, Chicher J, Marzi S, Romby P, Yusupova G, Yusupov M, Hashem Y. Structure of the 70S ribosome from human pathogen Staphylococcus aureus. Nucleic Acids Res. 2017 01 25; 45(2):1026. PMID: 28123039.
      View in: PubMed
    10. Khusainov I, Vicens Q, Bochler A, Grosse F, Myasnikov A, Ménétret JF, Chicher J, Marzi S, Romby P, Yusupova G, Yusupov M, Hashem Y. Structure of the 70S ribosome from human pathogen Staphylococcus aureus. Nucleic Acids Res. 2016 12 01; 44(21):10491-10504. PMID: 27906650.
      View in: PubMed
    11. Martin F, Ménétret JF, Simonetti A, Myasnikov AG, Vicens Q, Prongidi-Fix L, Natchiar SK, Klaholz BP, Eriani G. Ribosomal 18S rRNA base pairs with mRNA during eukaryotic translation initiation. Nat Commun. 2016 08 24; 7:12622. PMID: 27554013.
      View in: PubMed
    12. D'Ascenzo L, Leonarski F, Vicens Q, Auffinger P. 'Z-DNA like' fragments in RNA: a recurring structural motif with implications for folding, RNA/protein recognition and immune response. Nucleic Acids Res. 2016 07 08; 44(12):5944-56. PMID: 27151194; PMCID: PMC4937326.
      View in: PubMed, PubMed Central
    13. Vicens Q, Westhof E. Biogenesis of Circular RNAs. Cell. 2014 Sep 25; 159(1):13-14. PMID: 25259915.
      View in: PubMed
    14. Vicens Q, Mondragón E, Batey RT. Molecular sensing by the aptamer domain of the FMN riboswitch: a general model for ligand binding by conformational selection. Nucleic Acids Res. 2011 Oct; 39(19):8586-98. PMID: 21745821.
      View in: PubMed
    15. Shi J, Wood WB, Martin JM, Guild NA, Vicens Q, Knight JK. A diagnostic assessment for introductory molecular and cell biology. CBE Life Sci Educ. 2010; 9(4):453-61. PMID: 21123692; PMCID: PMC2995763.
      View in: PubMed, PubMed Central
    16. Vicens Q, Gooding AR, Duarte LF, Batey RT. Preparation of group I introns for biochemical studies and crystallization assays by native affinity purification. PLoS One. 2009 Aug 27; 4(8):e6740. PMID: 19710925; PMCID: PMC2729099.
      View in: PubMed, PubMed Central
    17. Vicens Q, Bourne PE. Ten simple rules to combine teaching and research. PLoS Comput Biol. 2009 Apr; 5(4):e1000358. PMID: 19390598; PMCID: PMC2661017.
      View in: PubMed, PubMed Central
    18. Vicens Q, Cech TR. A natural ribozyme with 3',5' RNA ligase activity. Nat Chem Biol. 2009 Feb; 5(2):97-9. PMID: 19125157; PMCID: PMC2897744.
      View in: PubMed, PubMed Central
    19. Vicens Q, Paukstelis PJ, Westhof E, Lambowitz AM, Cech TR. Toward predicting self-splicing and protein-facilitated splicing of group I introns. RNA. 2008 Oct; 14(10):2013-29. PMID: 18768647; PMCID: PMC2553746.
      View in: PubMed, PubMed Central
    20. Vicens Q, Allen MA, Gilbert SD, Reznik B, Gooding AR, Batey RT. The Cech Symposium: a celebration of 25 years of ribozymes, 10 years of TERT, and 60 years of Tom. RNA. 2008 Mar; 14(3):397-403. PMID: 18203922; PMCID: PMC2248266.
      View in: PubMed, PubMed Central
    21. Laederach A, Das R, Vicens Q, Pearlman SM, Brenowitz M, Herschlag D, Altman RB. Semiautomated and rapid quantification of nucleic acid footprinting and structure mapping experiments. Nat Protoc. 2008; 3(9):1395-401. PMID: 18772866; PMCID: PMC2652576.
      View in: PubMed, PubMed Central
    22. Vicens Q, Bourne PE. Ten simple rules for a successful collaboration. PLoS Comput Biol. 2007 Mar 30; 3(3):e44. PMID: 17397252; PMCID: PMC1847992.
      View in: PubMed, PubMed Central
    23. Vicens Q, Gooding AR, Laederach A, Cech TR. Local RNA structural changes induced by crystallization are revealed by SHAPE. RNA. 2007 Apr; 13(4):536-48. PMID: 17299128; PMCID: PMC1831858.
      View in: PubMed, PubMed Central
    24. Vicens Q, Cech TR. Atomic level architecture of group I introns revealed. Trends Biochem Sci. 2006 Jan; 31(1):41-51. PMID: 16356725.
      View in: PubMed
    25. François B, Russell RJ, Murray JB, Aboul-ela F, Masquida B, Vicens Q, Westhof E. Crystal structures of complexes between aminoglycosides and decoding A site oligonucleotides: role of the number of rings and positive charges in the specific binding leading to miscoding. Nucleic Acids Res. 2005; 33(17):5677-90. PMID: 16214802.
      View in: PubMed
    26. Pfister P, Hobbie S, Vicens Q, Böttger EC, Westhof E. The molecular basis for A-site mutations conferring aminoglycoside resistance: relationship between ribosomal susceptibility and X-ray crystal structures. Chembiochem. 2003 Oct 06; 4(10):1078-88. PMID: 14523926.
      View in: PubMed
    27. Vicens Q, Westhof E. RNA as a drug target: the case of aminoglycosides. Chembiochem. 2003 Oct 06; 4(10):1018-23. PMID: 14523919.
      View in: PubMed
    28. Vicens Q, Westhof E. Molecular recognition of aminoglycoside antibiotics by ribosomal RNA and resistance enzymes: an analysis of x-ray crystal structures. Biopolymers. 2003 Sep; 70(1):42-57. PMID: 12925992.
      View in: PubMed
    29. Vicens Q, Westhof E. Crystal structure of geneticin bound to a bacterial 16S ribosomal RNA A site oligonucleotide. J Mol Biol. 2003 Feb 28; 326(4):1175-88. PMID: 12589761.
      View in: PubMed
    30. Vicens Q, Westhof E. Crystal structure of a complex between the aminoglycoside tobramycin and an oligonucleotide containing the ribosomal decoding a site. Chem Biol. 2002 Jun; 9(6):747-55. PMID: 12079787.
      View in: PubMed
    31. Vicens Q, Westhof E. Crystal structure of paromomycin docked into the eubacterial ribosomal decoding A site. Structure. 2001 Aug; 9(8):647-58. PMID: 11587639.
      View in: PubMed
    32. Walter F, Vicens Q, Westhof E. Aminoglycoside-RNA interactions. Curr Opin Chem Biol. 1999 Dec; 3(6):694-704. PMID: 10600721.
      View in: PubMed
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