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John Davis Rice

TitleAsst Professor-Research
InstitutionUniversity of Colorado Denver - Anschutz Medical Campus
DepartmentCSPH-Bio Info General Ops

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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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    1. Estes JP, Rice JD, Li S, Stringham HM, Boehnke M, Mukherjee B. Meta-analysis of gene-environment interaction exploiting gene-environment independence across multiple case-control studies. Stat Med. 2017 Jul 25. PMID: 28744888.
      View in: PubMed
    2. Rice JD, Tsodikov A. Semiparametric profile likelihood estimation for continuous outcomes with excess zeros in a random-threshold damage-resistance model. Stat Med. 2017 May 30; 36(12):1924-1935. PMID: 28192863.
      View in: PubMed
    3. Kim JY, Nong G, Rice JD, Gallo M, Preston JF, Altpeter F. In planta production and characterization of a hyperthermostable GH10 xylanase in transgenic sugarcane. Plant Mol Biol. 2017 Mar; 93(4-5):465-478. PMID: 28005227.
      View in: PubMed
    4. Rhee MS, Sawhney N, Kim YS, Rhee HJ, Hurlbert JC, St John FJ, Nong G, Rice JD, Preston JF. GH115 a-glucuronidase and GH11 xylanase from Paenibacillus sp. JDR-2: potential roles in processing glucuronoxylans. Appl Microbiol Biotechnol. 2017 Feb; 101(4):1465-1476. PMID: 27766358.
      View in: PubMed
    5. Rice JD, Tsodikov A. Semiparametric time-to-event modeling in the presence of a latent progression event. Biometrics. 2017 Jun; 73(2):463-472. PMID: 27556886.
      View in: PubMed
    6. Rice JD, Taylor JM. Locally Weighted Score Estimation for Quantile Classification in Binary Regression Models. Stat Biosci. 2016 Oct; 8(2):333-350. PMID: 28018492.
      View in: PubMed
    7. Chow V, Kim YS, Rhee MS, Sawhney N, St John FJ, Nong G, Rice JD, Preston JF. A 1,3-1,4-ß-Glucan Utilization Regulon in Paenibacillus sp. Strain JDR-2. Appl Environ Microbiol. 2016 Jan 08; 82(6):1789-98. PMID: 26746717; PMCID: PMC4784046.
    8. Rhee MS, Wei L, Sawhney N, Kim YS, Rice JD, Preston JF. Metabolic potential of Bacillus subtilis 168 for the direct conversion of xylans to fermentation products. Appl Microbiol Biotechnol. 2016 Feb; 100(3):1501-10. PMID: 26559526.
      View in: PubMed
    9. Li S, Mukherjee B, Taylor JM, Rice KM, Wen X, Rice JD, Stringham HM, Boehnke M. The role of environmental heterogeneity in meta-analysis of gene-environment interactions with quantitative traits. Genet Epidemiol. 2014 Jul; 38(5):416-29. PMID: 24801060; PMCID: PMC4108593.
    10. Rhee MS, Wei L, Sawhney N, Rice JD, St John FJ, Hurlbert JC, Preston JF. Engineering the xylan utilization system in Bacillus subtilis for production of acidic Xylooligosaccharides. Appl Environ Microbiol. 2014 Feb; 80(3):917-27. PMID: 24271172; PMCID: PMC3911196.
    11. Levy H, Seydafkan S, Rice JD, Easley KA, Tangpricha V. Comparative efficacy of vertebroplasty, kyphoplasty, and medical therapy for vertebral fractures on survival and prevention of recurrent fractures. Endocr Pract. 2012 Jul-Aug; 18(4):499-507. PMID: 22440996.
      View in: PubMed
    12. Chow V, Nong G, St John FJ, Rice JD, Dickstein E, Chertkov O, Bruce D, Detter C, Brettin T, Han J, Woyke T, Pitluck S, Nolan M, Pati A, Martin J, Copeland A, Land ML, Goodwin L, Jones JB, Ingram LO, Shanmugam KT, Preston JF. Complete genome sequence of Paenibacillus sp. strain JDR-2. Stand Genomic Sci. 2012 Mar 19; 6(1):1-10. PMID: 22675593; PMCID: PMC3368403.
    13. Sabel MS, Rice JD, Griffith KA, Lowe L, Wong SL, Chang AE, Johnson TM, Taylor JM. Validation of statistical predictive models meant to select melanoma patients for sentinel lymph node biopsy. Ann Surg Oncol. 2012 Jan; 19(1):287-93. PMID: 21822550; PMCID: PMC3890094.
    14. St John FJ, Hurlbert JC, Rice JD, Preston JF, Pozharski E. Ligand bound structures of a glycosyl hydrolase family 30 glucuronoxylan xylanohydrolase. J Mol Biol. 2011 Mar 18; 407(1):92-109. PMID: 21256135.
      View in: PubMed
    15. Nong G, Rice JD, Chow V, Preston JF. Aldouronate utilization in Paenibacillus sp. strain JDR-2: Physiological and enzymatic evidence for coupling of extracellular depolymerization and intracellular metabolism. Appl Environ Microbiol. 2009 Jul; 75(13):4410-8. PMID: 19395566; PMCID: PMC2704816.
    16. Bi C, Rice JD, Preston JF. Complete fermentation of xylose and methylglucuronoxylose derived from methylglucuronoxylan by Enterobacter asburiae strain JDR-1. Appl Environ Microbiol. 2009 Jan; 75(2):395-404. PMID: 19011070; PMCID: PMC2620709.
    17. Itoh Y, Rice JD, Goller C, Pannuri A, Taylor J, Meisner J, Beveridge TJ, Preston JF, Romeo T. Roles of pgaABCD genes in synthesis, modification, and export of the Escherichia coli biofilm adhesin poly-beta-1,6-N-acetyl-D-glucosamine. J Bacteriol. 2008 May; 190(10):3670-80. PMID: 18359807; PMCID: PMC2394981.
    18. St John FJ, Rice JD, Preston JF. Characterization of XynC from Bacillus subtilis subsp. subtilis strain 168 and analysis of its role in depolymerization of glucuronoxylan. J Bacteriol. 2006 Dec; 188(24):8617-26. PMID: 17028274; PMCID: PMC1698249.
    19. Stjohn FJ, Rice JD, Preston JF. Paenibacillus sp. strain JDR-2 and XynA1: a novel system for methylglucuronoxylan utilization. Appl Environ Microbiol. 2006 Feb; 72(2):1496-506. PMID: 16461704; PMCID: PMC1392964.
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